BLASTX nr result

ID: Dioscorea21_contig00019367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019367
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278464.1| PREDICTED: probable cyclic nucleotide-gated ...    72   5e-11
ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putativ...    69   4e-10
ref|XP_003540100.1| PREDICTED: probable cyclic nucleotide-gated ...    69   5e-10
ref|XP_002325129.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_004168115.1| PREDICTED: probable cyclic nucleotide-gated ...    66   3e-09

>ref|XP_002278464.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5 [Vitis
           vinifera] gi|297743648|emb|CBI36531.3| unnamed protein
           product [Vitis vinifera]
          Length = 743

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/43 (83%), Positives = 37/43 (86%)
 Frame = -1

Query: 441 GTTIFVSRFAANALRGVHKLRNTKSAIELVKLQKPPEPDFSAD 313
           G TI  SRFAANALRGVH+ R TKSA ELVKLQKPPEPDFSAD
Sbjct: 698 GATILASRFAANALRGVHRNRITKSARELVKLQKPPEPDFSAD 740


>ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223531133|gb|EEF32981.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 735

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/46 (76%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = -1

Query: 441 GTTIFVSRFAANALRGVHKLRNTKSAIELVKLQKPPEPDFSA-DAD 307
           G T   +RFAANALRGVH+ RN K+A ELVKLQKPPEPDFSA DAD
Sbjct: 690 GATFLATRFAANALRGVHRNRNAKTARELVKLQKPPEPDFSAEDAD 735


>ref|XP_003540100.1| PREDICTED: probable cyclic nucleotide-gated ion channel 5-like
           [Glycine max]
          Length = 732

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/43 (76%), Positives = 35/43 (81%)
 Frame = -1

Query: 441 GTTIFVSRFAANALRGVHKLRNTKSAIELVKLQKPPEPDFSAD 313
           G T   SRFAANALRGVH+ R  KSA ELVKLQKPPEPDF+AD
Sbjct: 687 GATFLASRFAANALRGVHRNREAKSARELVKLQKPPEPDFTAD 729


>ref|XP_002325129.1| predicted protein [Populus trichocarpa] gi|222866563|gb|EEF03694.1|
           predicted protein [Populus trichocarpa]
          Length = 733

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = -1

Query: 441 GTTIFVSRFAANALRGVHKLRNTKSAIELVKLQKPPEPDFSAD 313
           G T   +RFAANALRG+H+ RN K+A ELVKLQKPPEPDF+AD
Sbjct: 688 GATFLATRFAANALRGIHRNRNAKTARELVKLQKPPEPDFTAD 730


>ref|XP_004168115.1| PREDICTED: probable cyclic nucleotide-gated ion channel 6-like,
           partial [Cucumis sativus]
          Length = 711

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 31/41 (75%), Positives = 34/41 (82%)
 Frame = -1

Query: 435 TIFVSRFAANALRGVHKLRNTKSAIELVKLQKPPEPDFSAD 313
           T   S+FAANALRGV + RN KSA EL+KLQKPPEPDFSAD
Sbjct: 668 TFLASKFAANALRGVQRYRNAKSAQELIKLQKPPEPDFSAD 708


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