BLASTX nr result

ID: Dioscorea21_contig00019355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019355
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59822.1| hypothetical protein VITISV_001981 [Vitis vinifera]   110   1e-22
emb|CBI21987.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_003607592.1| F-box protein ORE9 [Medicago truncatula] gi|...   107   8e-22
ref|XP_003540983.1| PREDICTED: F-box protein ORE9-like [Glycine ...   107   1e-21
ref|XP_002436499.1| hypothetical protein SORBIDRAFT_10g003790 [S...   107   1e-21

>emb|CAN59822.1| hypothetical protein VITISV_001981 [Vitis vinifera]
          Length = 712

 Score =  110 bits (275), Expect = 1e-22
 Identities = 58/118 (49%), Positives = 72/118 (61%)
 Frame = -2

Query: 354 VCRAAGLHLDGVSVCGGLKTLCISNXXXXXXXXXSTIARGCRRLSKFEIHACRNVTEIGI 175
           +C A G  LDGV++C GL++L I N           IARGC +L+KFEIH C+ VT  GI
Sbjct: 338 LCLAIGSQLDGVALCQGLESLSIKNSADLTDMGLIAIARGCSKLAKFEIHGCKKVTWKGI 397

Query: 174 KKLAALLRMSLVQVSISGCPQFDVASVLRALEPIRDRIEHLHIDCSRWVQSPGKQDVE 1
             +A L R +LV+  IS C   D  S LR LEPIRDRI+ LHIDC  W +S   +D E
Sbjct: 398 STMACLRRSTLVEFKISCCKNLDAVSALRGLEPIRDRIQRLHIDCI-WDRSEQFEDSE 454


>emb|CBI21987.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/105 (51%), Positives = 66/105 (62%)
 Frame = -2

Query: 354 VCRAAGLHLDGVSVCGGLKTLCISNXXXXXXXXXSTIARGCRRLSKFEIHACRNVTEIGI 175
           +C A G  LDGV++C GL++L I N           IARGC +L+KFEIH C+ VT  GI
Sbjct: 344 LCLAIGSQLDGVALCQGLESLSIKNSADLTDMGLIAIARGCSKLAKFEIHGCKKVTWKGI 403

Query: 174 KKLAALLRMSLVQVSISGCPQFDVASVLRALEPIRDRIEHLHIDC 40
             +A L R +LV+  IS C   D  S LR LEPIRDRI+ LHIDC
Sbjct: 404 STMACLRRSTLVEFKISCCKNLDAVSALRGLEPIRDRIQRLHIDC 448


>ref|XP_003607592.1| F-box protein ORE9 [Medicago truncatula]
           gi|355508647|gb|AES89789.1| F-box protein ORE9 [Medicago
           truncatula]
          Length = 711

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/111 (45%), Positives = 71/111 (63%)
 Frame = -2

Query: 354 VCRAAGLHLDGVSVCGGLKTLCISNXXXXXXXXXSTIARGCRRLSKFEIHACRNVTEIGI 175
           +C A G  LDG+++C GL++L ++            I RGC RL +FEI  C+ VTE G+
Sbjct: 333 ICLAIGSRLDGIALCHGLQSLSVNTCGDLDDMGLIEIGRGCSRLVRFEIQGCKLVTEKGL 392

Query: 174 KKLAALLRMSLVQVSISGCPQFDVASVLRALEPIRDRIEHLHIDCSRWVQS 22
           + +A LLR +L+ V ++ C   D A+ LRALEPIRDRIE LH+DC  W +S
Sbjct: 393 RTMACLLRRTLIDVKVASCVNLDAAATLRALEPIRDRIERLHLDCI-WKES 442


>ref|XP_003540983.1| PREDICTED: F-box protein ORE9-like [Glycine max]
          Length = 711

 Score =  107 bits (267), Expect = 1e-21
 Identities = 50/105 (47%), Positives = 68/105 (64%)
 Frame = -2

Query: 354 VCRAAGLHLDGVSVCGGLKTLCISNXXXXXXXXXSTIARGCRRLSKFEIHACRNVTEIGI 175
           +C A G  LDG+++C GL++L + N           IARGC RL +FE+  CR VTE G+
Sbjct: 334 ICLAFGSRLDGIALCHGLQSLSVGNCADLDDMGLIEIARGCSRLVRFELQGCRLVTERGL 393

Query: 174 KKLAALLRMSLVQVSISGCPQFDVASVLRALEPIRDRIEHLHIDC 40
           + +A LL  +L+ V +S C   D A+ LRALEPIR+RIE LH+DC
Sbjct: 394 RTMACLLARTLIDVKVSCCVNLDTAATLRALEPIRERIERLHVDC 438


>ref|XP_002436499.1| hypothetical protein SORBIDRAFT_10g003790 [Sorghum bicolor]
           gi|241914722|gb|EER87866.1| hypothetical protein
           SORBIDRAFT_10g003790 [Sorghum bicolor]
          Length = 700

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/105 (49%), Positives = 68/105 (64%)
 Frame = -2

Query: 354 VCRAAGLHLDGVSVCGGLKTLCISNXXXXXXXXXSTIARGCRRLSKFEIHACRNVTEIGI 175
           +C+A+ LHLDGV+VCG L++LCI           + I RGC RL+KF IH C  VT +GI
Sbjct: 351 LCKASWLHLDGVAVCGSLESLCIKGCLDLTDASLAAIGRGCGRLAKFAIHGCDLVTSVGI 410

Query: 174 KKLAALLRMSLVQVSISGCPQFDVASVLRALEPIRDRIEHLHIDC 40
           ++LA  LR ++ +VSI  C   D A+ L AL PIRDRIE L + C
Sbjct: 411 RRLATALRPTIKEVSILHCRLLDTATCLTALSPIRDRIESLEVSC 455


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