BLASTX nr result

ID: Dioscorea21_contig00019322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019322
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC72158.1| hypothetical protein OsI_05195 [Oryza sativa Indi...   125   5e-27
ref|NP_001045399.1| Os01g0949400 [Oryza sativa Japonica Group] g...   124   6e-27
ref|XP_003565060.1| PREDICTED: phytochromobilin:ferredoxin oxido...   117   7e-25
ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersi...   115   5e-24
emb|CBI24211.3| unnamed protein product [Vitis vinifera]              112   2e-23

>gb|EEC72158.1| hypothetical protein OsI_05195 [Oryza sativa Indica Group]
          Length = 301

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/100 (62%), Positives = 77/100 (77%)
 Frame = -1

Query: 300 SSLSYHKFVNFAMEEARLCTTLTPLPYQEKVRTMKVKDDKTVLHALSYQAPKIRLLRSLT 121
           + L YHKFV+FA+EE RL TTLTP P QEK +++K  DD TV +ALS+ APKIRLLRSLT
Sbjct: 13  AGLPYHKFVSFALEETRLRTTLTPHPSQEKFKSIKPNDDNTVFNALSFSAPKIRLLRSLT 72

Query: 120 IDGGSAMQVLDFAGIPEPMFDMPIFCANFFTIPSLSIIVL 1
           I+  ++ QVLDFA   EP +D+PIFCAN FT  + SI+VL
Sbjct: 73  IEKKNSYQVLDFAAFSEPEYDLPIFCANVFTTHAQSIVVL 112


>ref|NP_001045399.1| Os01g0949400 [Oryza sativa Japonica Group]
           gi|57900463|dbj|BAD87875.1| putative phytochromobilin
           synthase [Oryza sativa Japonica Group]
           gi|113534930|dbj|BAF07313.1| Os01g0949400 [Oryza sativa
           Japonica Group] gi|215715293|dbj|BAG95044.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222619871|gb|EEE56003.1| hypothetical protein
           OsJ_04760 [Oryza sativa Japonica Group]
          Length = 301

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/100 (62%), Positives = 77/100 (77%)
 Frame = -1

Query: 300 SSLSYHKFVNFAMEEARLCTTLTPLPYQEKVRTMKVKDDKTVLHALSYQAPKIRLLRSLT 121
           + L YHKFV+FA+EE RL TTLTP P QEK +++K  DD TV +ALS+ APKIRLLRSLT
Sbjct: 13  AGLLYHKFVSFALEETRLRTTLTPHPSQEKFKSIKPNDDNTVFNALSFSAPKIRLLRSLT 72

Query: 120 IDGGSAMQVLDFAGIPEPMFDMPIFCANFFTIPSLSIIVL 1
           I+  ++ QVLDFA   EP +D+PIFCAN FT  + SI+VL
Sbjct: 73  IEKKNSYQVLDFAAFSEPEYDLPIFCANVFTTHAQSIVVL 112


>ref|XP_003565060.1| PREDICTED: phytochromobilin:ferredoxin oxidoreductase,
           chloroplastic-like [Brachypodium distachyon]
          Length = 298

 Score =  117 bits (294), Expect = 7e-25
 Identities = 58/97 (59%), Positives = 72/97 (74%)
 Frame = -1

Query: 291 SYHKFVNFAMEEARLCTTLTPLPYQEKVRTMKVKDDKTVLHALSYQAPKIRLLRSLTIDG 112
           SYH+FV+ AME+ RL T L P P QEK + +K  DD TV  ALS+ APK+RLLRSLTI+ 
Sbjct: 13  SYHRFVHSAMEQTRLRTALAPHPSQEKFKCIKANDDSTVFGALSFSAPKVRLLRSLTIEK 72

Query: 111 GSAMQVLDFAGIPEPMFDMPIFCANFFTIPSLSIIVL 1
            +++QVLDFA   EP +D+PIFCAN FT P  SI+VL
Sbjct: 73  ENSVQVLDFAAFSEPEYDLPIFCANAFTSPVQSIVVL 109


>ref|NP_001234133.1| phytochromobilin synthase [Solanum lycopersicum]
           gi|62149356|dbj|BAD93478.1| phytochromobilin synthase
           [Solanum lycopersicum] gi|62149358|dbj|BAD93479.1|
           phytochromobilin synthase [Solanum lycopersicum]
          Length = 342

 Score =  115 bits (287), Expect = 5e-24
 Identities = 58/116 (50%), Positives = 77/116 (66%)
 Frame = -1

Query: 348 KIGDRLGGTYRVDMDLSSLSYHKFVNFAMEEARLCTTLTPLPYQEKVRTMKVKDDKTVLH 169
           ++G +       + + S +SY K ++FA+EE    T L+P P QEK  ++   DDKT L 
Sbjct: 37  EVGSKCVRMSYTENESSGVSYKKLIHFALEETNTHTLLSPSPLQEKYSSLLSMDDKTELQ 96

Query: 168 ALSYQAPKIRLLRSLTIDGGSAMQVLDFAGIPEPMFDMPIFCANFFTIPSLSIIVL 1
            LS++A KIRLLRSL I+G   MQVLDFA  P+P FD+PIFCANFFT   ++IIVL
Sbjct: 97  MLSFEAHKIRLLRSLCIEGTDGMQVLDFAAFPKPEFDLPIFCANFFTTAKMNIIVL 152


>emb|CBI24211.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  112 bits (281), Expect = 2e-23
 Identities = 54/103 (52%), Positives = 73/103 (70%)
 Frame = -1

Query: 309 MDLSSLSYHKFVNFAMEEARLCTTLTPLPYQEKVRTMKVKDDKTVLHALSYQAPKIRLLR 130
           +++S+ SY KF++FA++E +  T L P P QE   +M   D K  L  +S+QAPKIRLLR
Sbjct: 89  VEVSACSYQKFLHFALDETKRRTHLLPSPLQENFNSMMAMDGKAKLQMVSFQAPKIRLLR 148

Query: 129 SLTIDGGSAMQVLDFAGIPEPMFDMPIFCANFFTIPSLSIIVL 1
           +L+I+    MQ+LDFA  PE  FD+PIFCANFFT P+ +IIVL
Sbjct: 149 NLSIEASEGMQILDFAVFPEQEFDLPIFCANFFTTPTTNIIVL 191


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