BLASTX nr result

ID: Dioscorea21_contig00019282 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019282
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001066507.1| Os12g0256300 [Oryza sativa Japonica Group] g...    82   6e-14
gb|EEE53027.1| hypothetical protein OsJ_35744 [Oryza sativa Japo...    82   6e-14
emb|CAO82945.1| putative pre-mRNA-splicing factor cwc-22 [Oryza ...    82   6e-14
emb|CAO82944.1| putative pre-mRNA-splicing factor cwc-22 [Oryza ...    82   6e-14
emb|CAO82943.1| putative pre-mRNA-splicing factor cwc-22 [Oryza ...    82   6e-14

>ref|NP_001066507.1| Os12g0256300 [Oryza sativa Japonica Group]
           gi|77554176|gb|ABA96972.1| Pre-mRNA splicing factor
           cwc22, putative, expressed [Oryza sativa Japonica Group]
           gi|113649014|dbj|BAF29526.1| Os12g0256300 [Oryza sativa
           Japonica Group] gi|156622336|emb|CAO82941.1| putative
           pre-mRNA-splicing factor cwc-22 [Oryza sativa Japonica
           Group] gi|215707245|dbj|BAG93705.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 787

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/46 (80%), Positives = 42/46 (91%)
 Frame = +3

Query: 3   QEDQFTHEISLEDEVDPETNLDVFKPNPTFLDDEKAYENLKTNILG 140
           QEDQFTHEISLEDE+DPETNL+VF+ NP F +DEKAYENLK +ILG
Sbjct: 455 QEDQFTHEISLEDELDPETNLNVFRANPNFAEDEKAYENLKRSILG 500


>gb|EEE53027.1| hypothetical protein OsJ_35744 [Oryza sativa Japonica Group]
          Length = 1003

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/46 (80%), Positives = 42/46 (91%)
 Frame = +3

Query: 3   QEDQFTHEISLEDEVDPETNLDVFKPNPTFLDDEKAYENLKTNILG 140
           QEDQFTHEISLEDE+DPETNL+VF+ NP F +DEKAYENLK +ILG
Sbjct: 455 QEDQFTHEISLEDELDPETNLNVFRANPNFAEDEKAYENLKRSILG 500


>emb|CAO82945.1| putative pre-mRNA-splicing factor cwc-22 [Oryza sativa Indica
           Group]
          Length = 746

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/46 (80%), Positives = 42/46 (91%)
 Frame = +3

Query: 3   QEDQFTHEISLEDEVDPETNLDVFKPNPTFLDDEKAYENLKTNILG 140
           QEDQFTHEISLEDE+DPETNL+VF+ NP F +DEKAYENLK +ILG
Sbjct: 414 QEDQFTHEISLEDELDPETNLNVFRANPNFAEDEKAYENLKRSILG 459


>emb|CAO82944.1| putative pre-mRNA-splicing factor cwc-22 [Oryza sativa Indica
           Group]
          Length = 736

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/46 (80%), Positives = 42/46 (91%)
 Frame = +3

Query: 3   QEDQFTHEISLEDEVDPETNLDVFKPNPTFLDDEKAYENLKTNILG 140
           QEDQFTHEISLEDE+DPETNL+VF+ NP F +DEKAYENLK +ILG
Sbjct: 404 QEDQFTHEISLEDELDPETNLNVFRANPNFAEDEKAYENLKRSILG 449


>emb|CAO82943.1| putative pre-mRNA-splicing factor cwc-22 [Oryza sativa Japonica
           Group]
          Length = 615

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/46 (80%), Positives = 42/46 (91%)
 Frame = +3

Query: 3   QEDQFTHEISLEDEVDPETNLDVFKPNPTFLDDEKAYENLKTNILG 140
           QEDQFTHEISLEDE+DPETNL+VF+ NP F +DEKAYENLK +ILG
Sbjct: 283 QEDQFTHEISLEDELDPETNLNVFRANPNFAEDEKAYENLKRSILG 328


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