BLASTX nr result

ID: Dioscorea21_contig00019273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019273
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB23692.1| acidic class I chitinase [Dioscorea japonica=yams...   198   4e-49
dbj|BAC56863.1| chitinase [Dioscorea oppositifolia]                   198   4e-49
sp|P80052.2|CHIT_DIOJA RecName: Full=Acidic endochitinase             198   4e-49
ref|XP_002876253.1| hypothetical protein ARALYDRAFT_485842 [Arab...   124   6e-27
emb|CAA74930.1| class IV chitinase [Arabidopsis thaliana]             123   2e-26

>gb|AAB23692.1| acidic class I chitinase [Dioscorea japonica=yams, aerial tubers,
           Peptide, 250 aa]
          Length = 250

 Score =  198 bits (503), Expect = 4e-49
 Identities = 92/94 (97%), Positives = 92/94 (97%)
 Frame = -2

Query: 412 IDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQ 233
           IDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQ
Sbjct: 157 IDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQ 216

Query: 232 ECDGHNTAQMMARVRYYQEYCAQLGVSPGNNLTC 131
           ECDGHNTAQMMARV YYQEYCAQLGVSPGNNL C
Sbjct: 217 ECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250


>dbj|BAC56863.1| chitinase [Dioscorea oppositifolia]
          Length = 286

 Score =  198 bits (503), Expect = 4e-49
 Identities = 92/102 (90%), Positives = 100/102 (98%)
 Frame = -2

Query: 412 IDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQ 233
           IDAGKEL+FDGLNDPDIVGRDPI+SFKTSLW+WIRKGVQYVILDP+QGFGA+IRIINGGQ
Sbjct: 185 IDAGKELNFDGLNDPDIVGRDPILSFKTSLWYWIRKGVQYVILDPDQGFGASIRIINGGQ 244

Query: 232 ECDGHNTAQMMARVRYYQEYCAQLGVSPGNNLTCVTSNLAVS 107
           ECDG NTAQMMARV YY++YCAQLGVSPGN+LTCVTSNLAVS
Sbjct: 245 ECDGKNTAQMMARVGYYEQYCAQLGVSPGNDLTCVTSNLAVS 286


>sp|P80052.2|CHIT_DIOJA RecName: Full=Acidic endochitinase
          Length = 250

 Score =  198 bits (503), Expect = 4e-49
 Identities = 92/94 (97%), Positives = 92/94 (97%)
 Frame = -2

Query: 412 IDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQ 233
           IDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQ
Sbjct: 157 IDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQ 216

Query: 232 ECDGHNTAQMMARVRYYQEYCAQLGVSPGNNLTC 131
           ECDGHNTAQMMARV YYQEYCAQLGVSPGNNL C
Sbjct: 217 ECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250


>ref|XP_002876253.1| hypothetical protein ARALYDRAFT_485842 [Arabidopsis lyrata subsp.
           lyrata] gi|297322091|gb|EFH52512.1| hypothetical protein
           ARALYDRAFT_485842 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/92 (65%), Positives = 70/92 (76%)
 Frame = -2

Query: 406 AGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQEC 227
           AG  + FDGLN P+ VG DP+ISFKT+LW+W  + VQ V+   +QGFGATIR ING  EC
Sbjct: 186 AGTAIGFDGLNAPETVGTDPVISFKTALWYWTNR-VQPVL---SQGFGATIRAINGALEC 241

Query: 226 DGHNTAQMMARVRYYQEYCAQLGVSPGNNLTC 131
           DG NTA + ARVRYY +YC QLGV PGNNLTC
Sbjct: 242 DGANTATVQARVRYYTDYCRQLGVDPGNNLTC 273


>emb|CAA74930.1| class IV chitinase [Arabidopsis thaliana]
          Length = 274

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/92 (65%), Positives = 69/92 (75%)
 Frame = -2

Query: 406 AGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQEC 227
           AG  + FDGLN P+ V  DP+ISFKT+LW+W  + VQ VI   +QGFGATIR ING  EC
Sbjct: 187 AGTAIGFDGLNAPETVATDPVISFKTALWYWTNR-VQPVI---SQGFGATIRAINGALEC 242

Query: 226 DGHNTAQMMARVRYYQEYCAQLGVSPGNNLTC 131
           DG NTA + ARVRYY +YC QLGV PGNNLTC
Sbjct: 243 DGANTATVQARVRYYTDYCRQLGVDPGNNLTC 274


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