BLASTX nr result

ID: Dioscorea21_contig00019272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019272
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC56863.1| chitinase [Dioscorea oppositifolia]                   182   3e-44
gb|AAB23692.1| acidic class I chitinase [Dioscorea japonica=yams...   170   1e-40
sp|P80052.2|CHIT_DIOJA RecName: Full=Acidic endochitinase             170   1e-40
gb|AET86623.2| class IV endochitinase [Dactylis glomerata]            106   2e-21
gb|AEZ67306.1| chitinase 7 [Populus x canadensis]                     103   1e-20

>dbj|BAC56863.1| chitinase [Dioscorea oppositifolia]
          Length = 286

 Score =  182 bits (461), Expect = 3e-44
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = +2

Query: 2   IDAGKELNFDGLNDPDIVGRDPILSFKTSLWYWIRKGVQYVILDPDQGFGASIRIINGGQ 181
           IDAGKELNFDGLNDPDIVGRDPILSFKTSLWYWIRKGVQYVILDPDQGFGASIRIINGGQ
Sbjct: 185 IDAGKELNFDGLNDPDIVGRDPILSFKTSLWYWIRKGVQYVILDPDQGFGASIRIINGGQ 244

Query: 182 ECDGKNTAQMMARVGYYEQYCAQLG 256
           ECDGKNTAQMMARVGYYEQYCAQLG
Sbjct: 245 ECDGKNTAQMMARVGYYEQYCAQLG 269


>gb|AAB23692.1| acidic class I chitinase [Dioscorea japonica=yams, aerial tubers,
           Peptide, 250 aa]
          Length = 250

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/85 (90%), Positives = 84/85 (98%)
 Frame = +2

Query: 2   IDAGKELNFDGLNDPDIVGRDPILSFKTSLWYWIRKGVQYVILDPDQGFGASIRIINGGQ 181
           IDAGKEL+FDGLNDPDIVGRDPI+SFKTSLW+WIRKGVQYVILDP+QGFGA+IRIINGGQ
Sbjct: 157 IDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQ 216

Query: 182 ECDGKNTAQMMARVGYYEQYCAQLG 256
           ECDG NTAQMMARVGYY++YCAQLG
Sbjct: 217 ECDGHNTAQMMARVGYYQEYCAQLG 241


>sp|P80052.2|CHIT_DIOJA RecName: Full=Acidic endochitinase
          Length = 250

 Score =  170 bits (430), Expect = 1e-40
 Identities = 77/85 (90%), Positives = 84/85 (98%)
 Frame = +2

Query: 2   IDAGKELNFDGLNDPDIVGRDPILSFKTSLWYWIRKGVQYVILDPDQGFGASIRIINGGQ 181
           IDAGKEL+FDGLNDPDIVGRDPI+SFKTSLW+WIRKGVQYVILDP+QGFGA+IRIINGGQ
Sbjct: 157 IDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQ 216

Query: 182 ECDGKNTAQMMARVGYYEQYCAQLG 256
           ECDG NTAQMMARVGYY++YCAQLG
Sbjct: 217 ECDGHNTAQMMARVGYYQEYCAQLG 241


>gb|AET86623.2| class IV endochitinase [Dactylis glomerata]
          Length = 275

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/83 (61%), Positives = 62/83 (74%)
 Frame = +2

Query: 8   AGKELNFDGLNDPDIVGRDPILSFKTSLWYWIRKGVQYVILDPDQGFGASIRIINGGQEC 187
           AGK + FDGLN+P IV +D +++FKT+LWYW+   V  V+    QGFGA+IR ING  EC
Sbjct: 188 AGKAIGFDGLNNPQIVAQDNVVAFKTALWYWMTN-VHGVL---PQGFGATIRAINGAVEC 243

Query: 188 DGKNTAQMMARVGYYEQYCAQLG 256
           DGKNTAQM ARVGYY+ YC Q G
Sbjct: 244 DGKNTAQMNARVGYYQAYCRQFG 266


>gb|AEZ67306.1| chitinase 7 [Populus x canadensis]
          Length = 275

 Score =  103 bits (257), Expect = 1e-20
 Identities = 50/83 (60%), Positives = 58/83 (69%)
 Frame = +2

Query: 8   AGKELNFDGLNDPDIVGRDPILSFKTSLWYWIRKGVQYVILDPDQGFGASIRIINGGQEC 187
           AG+ + FDGLN P+ V  DP++SFKT+LWYW    VQ VI    QGFGA+IR ING  EC
Sbjct: 188 AGESIGFDGLNSPETVANDPVISFKTALWYWTNS-VQPVI---SQGFGATIRAINGALEC 243

Query: 188 DGKNTAQMMARVGYYEQYCAQLG 256
           DG N A + ARVGYY  YC QLG
Sbjct: 244 DGANPATVQARVGYYTDYCNQLG 266


Top