BLASTX nr result

ID: Dioscorea21_contig00019252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019252
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266775.1| PREDICTED: transcription factor MYC2-like [V...   140   5e-31
ref|XP_002320222.1| predicted protein [Populus trichocarpa] gi|2...   139   9e-31
ref|XP_002529965.1| DNA binding protein, putative [Ricinus commu...   139   1e-30
emb|CBI34590.3| unnamed protein product [Vitis vinifera]              138   2e-30
ref|XP_004166899.1| PREDICTED: transcription factor ATR2-like [C...   134   3e-29

>ref|XP_002266775.1| PREDICTED: transcription factor MYC2-like [Vitis vinifera]
          Length = 497

 Score =  140 bits (352), Expect = 5e-31
 Identities = 92/193 (47%), Positives = 112/193 (58%), Gaps = 37/193 (19%)
 Frame = -3

Query: 530 NCSRVREALLHGIQTLLCIPISGTGVLELGSSLIIPENLSFIHQLKSLYSS--------- 378
           NC R +EA +HGI T +CIP +G GVLELGSS +I EN   + Q KSL+ S         
Sbjct: 169 NCERAKEAQIHGIDTFVCIP-TGNGVLELGSSDVIRENWGLVQQAKSLFGSDHFIGLVSK 227

Query: 377 ---PNGSSH-----------------------PTISLKKE-LVNTTTFSSLNSDFSESDG 279
              P+   H                       P  + KKE +VN      L S+ S+SD 
Sbjct: 228 HSPPSAPIHFSFADIGIISGIQEEEGTRQDKKPMGNAKKEGIVNGCQSLCLESEHSDSDC 287

Query: 278 GGIVLDHTTR-PKKRGRKQAVAKDQVSPGSHVEAERQRREKLNNRFYALRAAVPNVSRMD 102
             + +    R PKKRGRK  + +D  +P +HVEAERQRREKLN+RFYALRA VPNVSRMD
Sbjct: 288 PLVAVTVEKRVPKKRGRKPRLGRD--APLNHVEAERQRREKLNHRFYALRAVVPNVSRMD 345

Query: 101 KASLLSDAVSYIN 63
           KASLL+DAVSYIN
Sbjct: 346 KASLLADAVSYIN 358


>ref|XP_002320222.1| predicted protein [Populus trichocarpa] gi|222860995|gb|EEE98537.1|
           predicted protein [Populus trichocarpa]
          Length = 430

 Score =  139 bits (350), Expect = 9e-31
 Identities = 109/266 (40%), Positives = 132/266 (49%), Gaps = 39/266 (14%)
 Frame = -3

Query: 743 IFWRLSPD---LLSLTWSDGLI------------LNNS----SSSDDTEWFYXXXXXXXX 621
           IFW+ S D    + L W DG               NNS    S+S+   WFY        
Sbjct: 44  IFWQASKDDSGQIFLAWGDGHFQGSKDTSPKLSTTNNSRMSTSNSERKRWFYVMSLTRSF 103

Query: 620 XXXXXXXXXXXXXXXXXXXXXXXXXSLHISNCSRVREALLHGIQTLLCIPISGTGVLELG 441
                                     L   NC RV+EA +HGI+TL+CIP S  GVLELG
Sbjct: 104 SPGDGILGKAYTTGSLIWLTGGHE--LQFYNCERVKEAQMHGIETLICIPTS-CGVLELG 160

Query: 440 SSLIIPENLSFIHQLKSLYSS-------PNGSSHPTISLKKELVNTTTFSSLNSDFSESD 282
           SS +I EN   + Q KSL+ S       P G ++P                L+ + S +D
Sbjct: 161 SSCVIRENWGIVQQAKSLFVSDLNSCLVPKGPNNPC---------QEPIQFLDRNISLAD 211

Query: 281 GGGIVL----DHTTRP-KKRGRKQA-VAKDQVS-------PGSHVEAERQRREKLNNRFY 141
           GG I      DHT    +KR +++A   KD V+       P +HVEAERQRREKLN+RFY
Sbjct: 212 GGIIAGLQEDDHTIEHGEKRTQERAETKKDNVNKLGQSGAPLNHVEAERQRREKLNHRFY 271

Query: 140 ALRAAVPNVSRMDKASLLSDAVSYIN 63
           ALRA VPNVSRMDKASLLSDAVSYIN
Sbjct: 272 ALRAVVPNVSRMDKASLLSDAVSYIN 297


>ref|XP_002529965.1| DNA binding protein, putative [Ricinus communis]
           gi|223530527|gb|EEF32408.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 486

 Score =  139 bits (349), Expect = 1e-30
 Identities = 94/193 (48%), Positives = 113/193 (58%), Gaps = 33/193 (17%)
 Frame = -3

Query: 542 LHISNCSRVREALLHGIQTLLCIPISGTGVLELGSSLIIPENLSFIHQLKSLYSS---PN 372
           L   NC R +EA +HGI+TL+CIP    GVLELGSS +I EN   + Q KSL+ S   PN
Sbjct: 163 LQFYNCERAKEAQMHGIETLVCIPTCD-GVLELGSSDLIRENWGVVQQAKSLFGSDMMPN 221

Query: 371 GSSHPTISLKKELV-------------NTTTFSS--------------LNSDFSESDGGG 273
             S P   L   +              +TTT ++                S+ S+SD   
Sbjct: 222 NPSPPIHLLDMNISFADIGIIAGVQEGDTTTHANQKPQENDAKKESNNAESEHSDSDSSL 281

Query: 272 IV---LDHTTRPKKRGRKQAVAKDQVSPGSHVEAERQRREKLNNRFYALRAAVPNVSRMD 102
           +    LD  T PKKRGRK A+ +D  +P +HVEAER RREKLN+RFYALRA VPNVSRMD
Sbjct: 282 LAAASLDKKT-PKKRGRKPALGRD--TPLNHVEAERLRREKLNHRFYALRAVVPNVSRMD 338

Query: 101 KASLLSDAVSYIN 63
           KASLLSDAV YIN
Sbjct: 339 KASLLSDAVCYIN 351


>emb|CBI34590.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  138 bits (347), Expect = 2e-30
 Identities = 85/161 (52%), Positives = 104/161 (64%), Gaps = 1/161 (0%)
 Frame = -3

Query: 542 LHISNCSRVREALLHGIQTLLCIPISGTGVLELGSSLIIPENLSFIHQLKSLYSSPNGSS 363
           L   +C RV EA ++GI+TLLC+  S  GVLELGS  +I E+   +   KSL+ S   + 
Sbjct: 44  LQCYDCERVTEARMNGIRTLLCVSTS-CGVLELGSLDMIKEDWGLVLLAKSLFGSKPSTQ 102

Query: 362 HPTISLKKELVNTTTFSSLNSDFSESDGG-GIVLDHTTRPKKRGRKQAVAKDQVSPGSHV 186
                 KK+   T   SS +S  S+SD      L    RPKKRGRK A  ++   P +HV
Sbjct: 103 QQKDHDKKDAGTTVGRSSSDSGHSDSDEPFASALTENIRPKKRGRKPATGREM--PLNHV 160

Query: 185 EAERQRREKLNNRFYALRAAVPNVSRMDKASLLSDAVSYIN 63
           EAERQRREKLN+RFYALRA VPNVSRMDKASLL+DAVSYI+
Sbjct: 161 EAERQRREKLNHRFYALRAVVPNVSRMDKASLLADAVSYIH 201


>ref|XP_004166899.1| PREDICTED: transcription factor ATR2-like [Cucumis sativus]
          Length = 431

 Score =  134 bits (337), Expect = 3e-29
 Identities = 88/184 (47%), Positives = 107/184 (58%), Gaps = 24/184 (13%)
 Frame = -3

Query: 542 LHISNCSRVREALLHGIQTLLCIPISGTGVLELGSSLIIPENLSFIHQLKSLYSSP--NG 369
           LH+ +C RV+EA  HGIQT LC+P S  GVLEL S  IIPE+   I Q+KSL+ S   N 
Sbjct: 114 LHLHDCHRVKEAKSHGIQTFLCVPTS-YGVLELASQQIIPEDWGLIQQIKSLFDSDFVNF 172

Query: 368 SSHPTISL-------------------KKELVNTTTFSSLNSDFSESDGGGIVLDHTTRP 246
           S+     L                   ++E+       +   ++  SD    VL      
Sbjct: 173 STTTDAPLPFLDQDFNFEDIGFISEVAEEEMETPLRKKTKTGEWELSDSDSPVLKTGVMK 232

Query: 245 K---KRGRKQAVAKDQVSPGSHVEAERQRREKLNNRFYALRAAVPNVSRMDKASLLSDAV 75
           K   KRGRK  ++K+     +HVEAERQRREKLNNRFYALR+ VPNVSRMDKASLLSDAV
Sbjct: 233 KTGQKRGRKPNMSKENAM--NHVEAERQRREKLNNRFYALRSVVPNVSRMDKASLLSDAV 290

Query: 74  SYIN 63
           SYIN
Sbjct: 291 SYIN 294


Top