BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019250
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_173972.1| pentatricopeptide repeat-containing protein [Ar...    60   1e-07
ref|XP_002893401.1| pentatricopeptide repeat-containing protein ...    60   1e-07
ref|XP_002322859.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat...    57   1e-06

>ref|NP_173972.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75263259|sp|Q9FZD4.1|PPR59_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g26500 gi|9797751|gb|AAF98569.1|AC013427_12
           Contains similarity to a hypothetical protein T12C14_170
           gi|7340718 from Arabidopsis thaliana BAC T12C14
           gb|AL162507 and contains multiple PPR PF|01535 repeats
           [Arabidopsis thaliana] gi|332192576|gb|AEE30697.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 505

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
 Frame = -1

Query: 320 TIINPDLLLRLTTILYQQQHASDSKXXXXXXXXXXXXXXXXXXXXXLCSRFPLSWRPLHR 141
           T IN D LLR+ TILYQQQ++ DS+                      C+ FPLSWRP+HR
Sbjct: 39  TPINQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQV--CNNFPLSWRPVHR 96

Query: 140 FLLWXXXXXXXXXXSRT-----LSVFGASKNIDLLW 48
           F L+          + T     L++ G S+N+DL W
Sbjct: 97  FFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFW 132


>ref|XP_002893401.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297339243|gb|EFH69660.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 500

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/96 (37%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
 Frame = -1

Query: 320 TIINPDLLLRLTTILYQQQHASDSKXXXXXXXXXXXXXXXXXXXXXLCSRFPLSWRPLHR 141
           T IN D LLR+ TILYQQQ++ DS+                      C+ FPLSWRP+HR
Sbjct: 39  TPINQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQV--CNNFPLSWRPVHR 96

Query: 140 FLLWXXXXXXXXXXSRT-----LSVFGASKNIDLLW 48
           F L+          + T     L++ G S+N+DL W
Sbjct: 97  FFLYSQIHHPDFVHTSTTSNKMLAIIGNSRNMDLFW 132


>ref|XP_002322859.1| predicted protein [Populus trichocarpa] gi|222867489|gb|EEF04620.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
 Frame = -1

Query: 344 SQSHTLSTTIINPDLLLRLTTILYQQQHASDSKXXXXXXXXXXXXXXXXXXXXXLCSRFP 165
           SQ++  S + +N D LLR+ T+L+QQQ +SD K                     +C++FP
Sbjct: 25  SQTYPSSPSPVNEDHLLRVCTVLFQQQDSSDFK--LRNKLSSIDFNLTHEFFLQVCNKFP 82

Query: 164 LSWRPLHRFLLW------XXXXXXXXXXSRTLSVFGASKNIDLLW 48
            SWRP+HRF  +                ++ L +FG S+N+DLLW
Sbjct: 83  ASWRPVHRFFQYTQQMPCSRFTHTSVSLNKMLDIFGRSRNLDLLW 127


>ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Glycine max]
          Length = 494

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
 Frame = -1

Query: 350 LKSQSHTLSTTIINPDLLLRLTTILYQQQHASDSKXXXXXXXXXXXXXXXXXXXXXLCSR 171
           L+   H +S   +NPD LLR+ TILYQQQ++ + +                     +C++
Sbjct: 21  LRRHHHHISP--VNPDHLLRVCTILYQQQNSPEPR--LTSKLASSEFQLTHEFFLQVCNK 76

Query: 170 FPLSWRPLHRFLLW----XXXXXXXXXXSRTLSVFGASKNIDLLWSTFTSSILTH 18
           FP SWRP++RF L+              ++ L V G S+NIDL W         H
Sbjct: 77  FPYSWRPVYRFFLYTQSLPHFTHSPVSFNKMLDVVGKSRNIDLFWDLLNDMARRH 131