BLASTX nr result

ID: Dioscorea21_contig00019230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019230
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329879.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002517899.1| translation elongation factor G, putative [R...   139   2e-31
ref|XP_002275162.1| PREDICTED: elongation factor G, mitochondria...   139   2e-31
emb|CAN77652.1| hypothetical protein VITISV_032323 [Vitis vinifera]   139   2e-31
ref|NP_001050501.1| Os03g0565500 [Oryza sativa Japonica Group] g...   137   7e-31

>ref|XP_002329879.1| predicted protein [Populus trichocarpa] gi|222871116|gb|EEF08247.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score =  140 bits (353), Expect = 1e-31
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = -3

Query: 226 TVTGDINKRKGMIVGNDQDGDDTVIAAHVPLNNMFGYSTALRSMTQGKGEFTMEYLEHAA 47
           TV GDINKRKG+IVGNDQDGDD++I AHVPLNNMFGYSTALRSMTQGKGEFTMEY EH+A
Sbjct: 614 TVAGDINKRKGVIVGNDQDGDDSIITAHVPLNNMFGYSTALRSMTQGKGEFTMEYKEHSA 673

Query: 46  VSQDVQTQLVNTYKA 2
           VSQDVQ QLVNTYKA
Sbjct: 674 VSQDVQMQLVNTYKA 688


>ref|XP_002517899.1| translation elongation factor G, putative [Ricinus communis]
           gi|223542881|gb|EEF44417.1| translation elongation
           factor G, putative [Ricinus communis]
          Length = 699

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = -3

Query: 226 TVTGDINKRKGMIVGNDQDGDDTVIAAHVPLNNMFGYSTALRSMTQGKGEFTMEYLEHAA 47
           TV GDINKRKG+IVGNDQDGDD+VI AHVPLNNMFGYST+LRSMTQGKGEFTMEY EH+A
Sbjct: 620 TVAGDINKRKGVIVGNDQDGDDSVITAHVPLNNMFGYSTSLRSMTQGKGEFTMEYKEHSA 679

Query: 46  VSQDVQTQLVNTYKA 2
           VSQDVQ QLVNTYKA
Sbjct: 680 VSQDVQMQLVNTYKA 694


>ref|XP_002275162.1| PREDICTED: elongation factor G, mitochondrial [Vitis vinifera]
           gi|297734553|emb|CBI16604.3| unnamed protein product
           [Vitis vinifera]
          Length = 746

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = -3

Query: 226 TVTGDINKRKGMIVGNDQDGDDTVIAAHVPLNNMFGYSTALRSMTQGKGEFTMEYLEHAA 47
           TVTGDINKRKG+IVGNDQDGDD+VI AHVPLNNMFGYST+LRSMTQGKGEFTMEY EH+ 
Sbjct: 665 TVTGDINKRKGVIVGNDQDGDDSVITAHVPLNNMFGYSTSLRSMTQGKGEFTMEYKEHSP 724

Query: 46  VSQDVQTQLVNTYKA 2
           VSQDVQ QLVNTYKA
Sbjct: 725 VSQDVQLQLVNTYKA 739


>emb|CAN77652.1| hypothetical protein VITISV_032323 [Vitis vinifera]
          Length = 746

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/75 (89%), Positives = 71/75 (94%)
 Frame = -3

Query: 226 TVTGDINKRKGMIVGNDQDGDDTVIAAHVPLNNMFGYSTALRSMTQGKGEFTMEYLEHAA 47
           TVTGDINKRKG+IVGNDQDGDD+VI AHVPLNNMFGYST+LRSMTQGKGEFTMEY EH+ 
Sbjct: 665 TVTGDINKRKGVIVGNDQDGDDSVITAHVPLNNMFGYSTSLRSMTQGKGEFTMEYKEHSP 724

Query: 46  VSQDVQTQLVNTYKA 2
           VSQDVQ QLVNTYKA
Sbjct: 725 VSQDVQLQLVNTYKA 739


>ref|NP_001050501.1| Os03g0565500 [Oryza sativa Japonica Group]
           gi|109940076|sp|Q9FE64.2|EFGM_ORYSJ RecName:
           Full=Elongation factor G, mitochondrial; Short=EF-Gmt;
           AltName: Full=Elongation factor G 1, mitochondrial;
           Short=mEF-G 1; AltName: Full=Elongation factor G1;
           Flags: Precursor gi|13957623|gb|AAK50578.1|AC084404_3
           mitochondrial elongation factor G [Oryza sativa Japonica
           Group] gi|108709356|gb|ABF97151.1| Elongation factor G,
           mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group] gi|113548972|dbj|BAF12415.1|
           Os03g0565500 [Oryza sativa Japonica Group]
          Length = 757

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/75 (86%), Positives = 70/75 (93%)
 Frame = -3

Query: 226 TVTGDINKRKGMIVGNDQDGDDTVIAAHVPLNNMFGYSTALRSMTQGKGEFTMEYLEHAA 47
           TVTGD+NKRKG+IVGNDQ+GDDTV+  HVPLNNMFGYSTALRSMTQGKGEF+MEYLEH  
Sbjct: 678 TVTGDMNKRKGIIVGNDQEGDDTVVVCHVPLNNMFGYSTALRSMTQGKGEFSMEYLEHNT 737

Query: 46  VSQDVQTQLVNTYKA 2
           VSQDVQ QLVNTYKA
Sbjct: 738 VSQDVQMQLVNTYKA 752


Top