BLASTX nr result

ID: Dioscorea21_contig00019226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019226
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32316.3| unnamed protein product [Vitis vinifera]              228   6e-58
ref|XP_002273388.1| PREDICTED: uncharacterized protein LOC100249...   228   6e-58
ref|XP_002321054.1| predicted protein [Populus trichocarpa] gi|2...   226   1e-57
ref|XP_002874884.1| mitochondrial transcription termination fact...   224   8e-57
ref|XP_002524797.1| conserved hypothetical protein [Ricinus comm...   224   8e-57

>emb|CBI32316.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  228 bits (580), Expect = 6e-58
 Identities = 110/143 (76%), Positives = 127/143 (88%)
 Frame = +3

Query: 108 SHVRASPPSPSTLYARPSLQKMKIQSAENRARVYDFLRSIGIVPDELEGLELPVTVEVMR 287
           +H+       S+LY+RPSL +MK Q  ENRARVY+FL+ IGIVPDEL+GLELPVTVEVM+
Sbjct: 73  THLEQRQGGSSSLYSRPSLLQMKNQRIENRARVYEFLKGIGIVPDELDGLELPVTVEVMK 132

Query: 288 DRIDFLHSLGLTLDDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQILH 467
           +R+DFLH LGL+++DINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQ+LH
Sbjct: 133 ERVDFLHKLGLSIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLH 192

Query: 468 SSVVIDLAPVVKYLQGMDIKAGD 536
           +SVV+DLAPVVK LQGMDIK  D
Sbjct: 193 ASVVVDLAPVVKNLQGMDIKPND 215


>ref|XP_002273388.1| PREDICTED: uncharacterized protein LOC100249461 [Vitis vinifera]
          Length = 530

 Score =  228 bits (580), Expect = 6e-58
 Identities = 110/143 (76%), Positives = 127/143 (88%)
 Frame = +3

Query: 108 SHVRASPPSPSTLYARPSLQKMKIQSAENRARVYDFLRSIGIVPDELEGLELPVTVEVMR 287
           +H+       S+LY+RPSL +MK Q  ENRARVY+FL+ IGIVPDEL+GLELPVTVEVM+
Sbjct: 80  THLEQRQGGSSSLYSRPSLLQMKNQRIENRARVYEFLKGIGIVPDELDGLELPVTVEVMK 139

Query: 288 DRIDFLHSLGLTLDDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQILH 467
           +R+DFLH LGL+++DINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQ+LH
Sbjct: 140 ERVDFLHKLGLSIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLH 199

Query: 468 SSVVIDLAPVVKYLQGMDIKAGD 536
           +SVV+DLAPVVK LQGMDIK  D
Sbjct: 200 ASVVVDLAPVVKNLQGMDIKPND 222


>ref|XP_002321054.1| predicted protein [Populus trichocarpa] gi|222861827|gb|EEE99369.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  226 bits (577), Expect = 1e-57
 Identities = 109/135 (80%), Positives = 123/135 (91%)
 Frame = +3

Query: 132 SPSTLYARPSLQKMKIQSAENRARVYDFLRSIGIVPDELEGLELPVTVEVMRDRIDFLHS 311
           S S+LY+RPSL +MK +   NRA+VY+FLR IGIVPDEL+GLELPVT EVMR+R+DFLH 
Sbjct: 84  SSSSLYSRPSLLEMKNEKIANRAKVYEFLRGIGIVPDELDGLELPVTTEVMRERVDFLHK 143

Query: 312 LGLTLDDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQILHSSVVIDLA 491
           LGLT++DINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQ+LH+SVV+DL 
Sbjct: 144 LGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRYPQVLHASVVVDLD 203

Query: 492 PVVKYLQGMDIKAGD 536
           PVVKYLQGMDIK  D
Sbjct: 204 PVVKYLQGMDIKPND 218


>ref|XP_002874884.1| mitochondrial transcription termination factor family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297320721|gb|EFH51143.1| mitochondrial transcription
           termination factor family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 534

 Score =  224 bits (570), Expect = 8e-57
 Identities = 107/148 (72%), Positives = 126/148 (85%)
 Frame = +3

Query: 93  PSPRRSHVRASPPSPSTLYARPSLQKMKIQSAENRARVYDFLRSIGIVPDELEGLELPVT 272
           PS RR   +       +LY+RPSL +M  + A NRA+VY+FLR IGIVPDEL+GLELPVT
Sbjct: 77  PSSRRDRDKDKGRDSQSLYSRPSLLEMNKEKAANRAKVYEFLRGIGIVPDELDGLELPVT 136

Query: 273 VEVMRDRIDFLHSLGLTLDDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRRY 452
            +VM++R++FLH LGLT++DINNYPLVLGCSVKKNM+PVLDYLGKLGVRKSTF EFLRRY
Sbjct: 137 ADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFAEFLRRY 196

Query: 453 PQILHSSVVIDLAPVVKYLQGMDIKAGD 536
           PQ+LH+SVVIDLAPVVKYLQG+DIK  D
Sbjct: 197 PQVLHASVVIDLAPVVKYLQGLDIKPSD 224


>ref|XP_002524797.1| conserved hypothetical protein [Ricinus communis]
           gi|223535981|gb|EEF37640.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 524

 Score =  224 bits (570), Expect = 8e-57
 Identities = 111/149 (74%), Positives = 127/149 (85%), Gaps = 2/149 (1%)
 Frame = +3

Query: 96  SPRRSHVRASPPS--PSTLYARPSLQKMKIQSAENRARVYDFLRSIGIVPDELEGLELPV 269
           +P+  +VR        S+LY  PSL  MK     NRA+VY+FL+SIGIVPDEL+GLELPV
Sbjct: 72  TPKMKNVRLGRKQRGSSSLYTSPSLLDMKNNKIANRAKVYEFLQSIGIVPDELDGLELPV 131

Query: 270 TVEVMRDRIDFLHSLGLTLDDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTEFLRR 449
           TVEVMR+R+DFLH LGLT++DINNYPLVLGCSVKKNMIPVLDYLGKLGVRKS+FTEFLRR
Sbjct: 132 TVEVMRERVDFLHQLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSSFTEFLRR 191

Query: 450 YPQILHSSVVIDLAPVVKYLQGMDIKAGD 536
           YPQ+LH+SVV+DLAPVVKYLQGMDIK  D
Sbjct: 192 YPQVLHASVVVDLAPVVKYLQGMDIKPND 220


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