BLASTX nr result

ID: Dioscorea21_contig00019219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019219
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001046027.1| Os02g0170200 [Oryza sativa Japonica Group] g...    68   7e-10
gb|EAY84651.1| hypothetical protein OsI_06023 [Oryza sativa Indi...    68   7e-10
gb|AFW70289.1| splicing factor, arginine/serine-rich 12 [Zea mays]     68   9e-10
ref|NP_001148365.1| splicing factor, arginine/serine-rich 12 [Ze...    68   9e-10
ref|XP_002453368.1| hypothetical protein SORBIDRAFT_04g004730 [S...    67   1e-09

>ref|NP_001046027.1| Os02g0170200 [Oryza sativa Japonica Group]
           gi|49387556|dbj|BAD25487.1| unknown protein [Oryza
           sativa Japonica Group] gi|49388073|dbj|BAD25185.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113535558|dbj|BAF07941.1| Os02g0170200 [Oryza sativa
           Japonica Group] gi|125580968|gb|EAZ21899.1| hypothetical
           protein OsJ_05552 [Oryza sativa Japonica Group]
           gi|215765921|dbj|BAG98149.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 162

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 116 DSFVELSKDDYFSKNNEFSTWLKEEKGLYFSDLSSEQA 3
           D F E+SKDDYF+KNNEF+TWLKEEKG +FSDLSSE A
Sbjct: 87  DDFKEISKDDYFAKNNEFATWLKEEKGKFFSDLSSESA 124


>gb|EAY84651.1| hypothetical protein OsI_06023 [Oryza sativa Indica Group]
          Length = 162

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 116 DSFVELSKDDYFSKNNEFSTWLKEEKGLYFSDLSSEQA 3
           D F E+SKDDYF+KNNEF+TWLKEEKG +FSDLSSE A
Sbjct: 87  DDFKEISKDDYFAKNNEFATWLKEEKGKFFSDLSSESA 124


>gb|AFW70289.1| splicing factor, arginine/serine-rich 12 [Zea mays]
          Length = 157

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = -1

Query: 113 SFVELSKDDYFSKNNEFSTWLKEEKGLYFSDLSSEQA 3
           +F E+SKDDYF+KNNEF+TWLKEEKG YFSDLSSE A
Sbjct: 83  AFKEISKDDYFAKNNEFATWLKEEKGKYFSDLSSESA 119


>ref|NP_001148365.1| splicing factor, arginine/serine-rich 12 [Zea mays]
           gi|195618570|gb|ACG31115.1| splicing factor,
           arginine/serine-rich 12 [Zea mays]
          Length = 157

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/37 (81%), Positives = 34/37 (91%)
 Frame = -1

Query: 113 SFVELSKDDYFSKNNEFSTWLKEEKGLYFSDLSSEQA 3
           +F E+SKDDYF+KNNEF+TWLKEEKG YFSDLSSE A
Sbjct: 83  AFKEISKDDYFAKNNEFATWLKEEKGKYFSDLSSESA 119


>ref|XP_002453368.1| hypothetical protein SORBIDRAFT_04g004730 [Sorghum bicolor]
           gi|241933199|gb|EES06344.1| hypothetical protein
           SORBIDRAFT_04g004730 [Sorghum bicolor]
          Length = 162

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = -1

Query: 110 FVELSKDDYFSKNNEFSTWLKEEKGLYFSDLSSEQA 3
           F E+SKDDYF+KNNEF+TWLKEEKG YFSDLSSE A
Sbjct: 89  FKEISKDDYFAKNNEFATWLKEEKGKYFSDLSSESA 124


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