BLASTX nr result

ID: Dioscorea21_contig00019217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019217
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136262.1| PREDICTED: WD and tetratricopeptide repeats ...   435   e-119
ref|XP_003558634.1| PREDICTED: WD and tetratricopeptide repeats ...   432   e-119
emb|CBI19235.3| unnamed protein product [Vitis vinifera]              432   e-119
ref|NP_001190286.1| WD and tetratricopeptide repeats protein 1 [...   429   e-118
ref|NP_568242.1| WD and tetratricopeptide repeats protein 1 [Ara...   429   e-118

>ref|XP_004136262.1| PREDICTED: WD and tetratricopeptide repeats protein 1-like [Cucumis
            sativus] gi|449497029|ref|XP_004160293.1| PREDICTED: WD
            and tetratricopeptide repeats protein 1-like [Cucumis
            sativus]
          Length = 759

 Score =  435 bits (1118), Expect = e-119
 Identities = 207/294 (70%), Positives = 251/294 (85%), Gaps = 5/294 (1%)
 Frame = +2

Query: 140  MDRWSYADGNIARILDNRRTDPARDINLKLQMHSSFIQRLTLKKEMEGHQGCVNALAWNS 319
            M+ +++ DGN+  +L++R  +  +D    LQMHSSFIQRL+ +KE+EGHQGCVNA+AWNS
Sbjct: 1    MEDFAFHDGNVCALLESRHINFRQDPAYGLQMHSSFIQRLSQEKELEGHQGCVNAVAWNS 60

Query: 320  KGSLLISGSDDTCLNIWSYTNGDLVQSIDTGHNANIFCTKFVPETSDELVVSGAADAEVR 499
            +GSLLISGSDDT +NIWSY+   L+ S+DTGH+ANIFCTKFVPE SD+LV+SGA DAEVR
Sbjct: 61   RGSLLISGSDDTRINIWSYSGRKLLHSVDTGHSANIFCTKFVPEMSDDLVLSGAGDAEVR 120

Query: 500  LFNLSRVIG-----DAVEPSGVFQCHSRRVKKLAVEVGNPNVVWSASEDGTLRQYDFREG 664
            LFNLSR+ G     + + PS +++CH+RRVKKLAVE+GNPNVVWSASEDGTLRQ+DFREG
Sbjct: 121  LFNLSRLRGRGQDDNPIAPSALYRCHARRVKKLAVEIGNPNVVWSASEDGTLRQHDFREG 180

Query: 665  ASCPPVGSTNQECRHVLLDLRCGAKKSLADPPGHCLHLKSCDISSTRPHQILVGGSDAFG 844
             SCPP G+++QEC +VLLDLRCGAK+SLADPP   L LKSCDISSTRPH +LVGGSDAF 
Sbjct: 181  MSCPPDGASHQECHNVLLDLRCGAKRSLADPPRQTLALKSCDISSTRPHLLLVGGSDAFA 240

Query: 845  RLYDRRMLPPLSSSQTKMKLPPCVTYFCPVHLAERRRSSLNLTHVTFSPNGEEV 1006
            RLYDRRMLPPLSSSQ +M  PPCV+YFCP+HL++R RS L+LTHVTFSPNGEE+
Sbjct: 241  RLYDRRMLPPLSSSQKRMSPPPCVSYFCPMHLSDRVRSGLHLTHVTFSPNGEEI 294


>ref|XP_003558634.1| PREDICTED: WD and tetratricopeptide repeats protein 1-like
            [Brachypodium distachyon]
          Length = 756

 Score =  432 bits (1111), Expect = e-119
 Identities = 206/292 (70%), Positives = 244/292 (83%), Gaps = 5/292 (1%)
 Frame = +2

Query: 146  RWSYADGNIARILDNRRTDPARDINLKLQMHSSFIQRLTLKKEMEGHQGCVNALAWNSKG 325
            RW ++DG +  +LD R    + +I+ ++Q HSS +QRL L+KEMEGH GCVNA++WNS G
Sbjct: 8    RWRFSDGGVTDLLDARSLHCSPEISKRMQFHSSLVQRLGLEKEMEGHVGCVNAISWNSNG 67

Query: 326  SLLISGSDDTCLNIWSYTNGDLVQSIDTGHNANIFCTKFVPETSDELVVSGAADAEVRLF 505
            SLLISGSDDT +NIWSY N +++  IDTGH+AN+FCTKFVPETSD++VVSGAADAEVR+F
Sbjct: 68   SLLISGSDDTRINIWSYANREMLHDIDTGHSANVFCTKFVPETSDDVVVSGAADAEVRVF 127

Query: 506  NLSRVIGD-----AVEPSGVFQCHSRRVKKLAVEVGNPNVVWSASEDGTLRQYDFREGAS 670
            NLSR+ G      ++EP+ V+QCHSRRVKKLAVEVGNPNVVWSASEDGTLRQ+DFRE  S
Sbjct: 128  NLSRLSGRRSREISMEPAAVYQCHSRRVKKLAVEVGNPNVVWSASEDGTLRQHDFRECTS 187

Query: 671  CPPVGSTNQECRHVLLDLRCGAKKSLADPPGHCLHLKSCDISSTRPHQILVGGSDAFGRL 850
            CP VG  NQECR+VLLDLRCGAKKSLADPP   L  KSCDISS RPHQ+LVGGSDAF RL
Sbjct: 188  CPRVGLANQECRNVLLDLRCGAKKSLADPPKQPLAFKSCDISSVRPHQLLVGGSDAFARL 247

Query: 851  YDRRMLPPLSSSQTKMKLPPCVTYFCPVHLAERRRSSLNLTHVTFSPNGEEV 1006
            YDRRMLPPLSS QT+ K PPC+  FCP+HLA+ R+S+L+LTHV FSPNG+EV
Sbjct: 248  YDRRMLPPLSSCQTRRKPPPCIKMFCPLHLADNRKSNLHLTHVAFSPNGKEV 299


>emb|CBI19235.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  432 bits (1110), Expect = e-119
 Identities = 207/294 (70%), Positives = 243/294 (82%), Gaps = 5/294 (1%)
 Frame = +2

Query: 140  MDRWSYADGNIARILDNRRTDPARDINLKLQMHSSFIQRLTLKKEMEGHQGCVNALAWNS 319
            M+  ++ D N+   +D R  D   D++  LQMHSS ++RLT + E+EGHQGCVN +AWNS
Sbjct: 1    METTNFHDSNLYNFVDGRSIDFRHDVSRSLQMHSSLLRRLTQEGELEGHQGCVNTVAWNS 60

Query: 320  KGSLLISGSDDTCLNIWSYTNGDLVQSIDTGHNANIFCTKFVPETSDELVVSGAADAEVR 499
            +GSLLISGSDDT +NIW+Y +  L+  I+TGH+ANIFC KF+PETSDELV SGA DAEVR
Sbjct: 61   RGSLLISGSDDTRINIWNYPSRKLLHCIETGHSANIFCAKFIPETSDELVASGAGDAEVR 120

Query: 500  LFNLSRVIG-----DAVEPSGVFQCHSRRVKKLAVEVGNPNVVWSASEDGTLRQYDFREG 664
            LF+LSR+ G     +A+ PS +FQCH+RRVKKLAVEVGNPNVVWSASEDGTLRQ+DFREG
Sbjct: 121  LFHLSRLSGRGPDENAITPSALFQCHTRRVKKLAVEVGNPNVVWSASEDGTLRQHDFREG 180

Query: 665  ASCPPVGSTNQECRHVLLDLRCGAKKSLADPPGHCLHLKSCDISSTRPHQILVGGSDAFG 844
            ASCPP GS++QECR+VLLDLRCGAKKSLADPP  CL LKSCDISSTRPH +LVGGSDAF 
Sbjct: 181  ASCPPAGSSHQECRNVLLDLRCGAKKSLADPPKQCLSLKSCDISSTRPHLLLVGGSDAFA 240

Query: 845  RLYDRRMLPPLSSSQTKMKLPPCVTYFCPVHLAERRRSSLNLTHVTFSPNGEEV 1006
            RLYDRRMLPPL+S    M  PPCV YFCP+HL++  RSSL+LTHVTFSPNGEEV
Sbjct: 241  RLYDRRMLPPLTSCGKTMTPPPCVNYFCPMHLSDHGRSSLHLTHVTFSPNGEEV 294


>ref|NP_001190286.1| WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana]
            gi|8979728|emb|CAB96849.1| putative protein [Arabidopsis
            thaliana] gi|332004229|gb|AED91612.1| WD and
            tetratricopeptide repeats protein 1 [Arabidopsis
            thaliana]
          Length = 754

 Score =  429 bits (1104), Expect = e-118
 Identities = 205/294 (69%), Positives = 245/294 (83%), Gaps = 5/294 (1%)
 Frame = +2

Query: 140  MDRWSYADGNIARILDNRRTDPARDINLKLQMHSSFIQRLTLKKEMEGHQGCVNALAWNS 319
            MD  S+ DGNI  +L  R  DP+ +++ ++Q HSS ++RL+ ++E+EGHQGCVNALAWNS
Sbjct: 1    MDNLSFHDGNIFNLLHTRSQDPSHEVDQRMQFHSSLVRRLSQEQELEGHQGCVNALAWNS 60

Query: 320  KGSLLISGSDDTCLNIWSYTNGDLVQSIDTGHNANIFCTKFVPETSDELVVSGAADAEVR 499
             GSLLISGSDD  +NIW+Y++  L+ SIDTGH ANIFCTKFVPETSDELVVSGA DAEVR
Sbjct: 61   NGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAEVR 120

Query: 500  LFNLSRVIG-----DAVEPSGVFQCHSRRVKKLAVEVGNPNVVWSASEDGTLRQYDFREG 664
            LFN SR+ G     +A+ PS ++QCH+RRVKKLAVE GNPNVVWSASEDGTLRQ+DFRE 
Sbjct: 121  LFNTSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNPNVVWSASEDGTLRQHDFRES 180

Query: 665  ASCPPVGSTNQECRHVLLDLRCGAKKSLADPPGHCLHLKSCDISSTRPHQILVGGSDAFG 844
             SCPP G+ +QECR VLLDLR GAK++LADPP   L LKSCDIS+TRPH +LVGGSDAF 
Sbjct: 181  TSCPPAGTAHQECRSVLLDLRSGAKRALADPPKQTLSLKSCDISATRPHLLLVGGSDAFA 240

Query: 845  RLYDRRMLPPLSSSQTKMKLPPCVTYFCPVHLAERRRSSLNLTHVTFSPNGEEV 1006
            RLYDRRMLPPL+SS+ +M  PPCV YFCP+HL+ER R++L+LTHVTFSPNGEEV
Sbjct: 241  RLYDRRMLPPLASSRKRMPPPPCVNYFCPMHLSERGRTNLHLTHVTFSPNGEEV 294


>ref|NP_568242.1| WD and tetratricopeptide repeats protein 1 [Arabidopsis thaliana]
            gi|14532680|gb|AAK64141.1| unknown protein [Arabidopsis
            thaliana] gi|23297429|gb|AAN12885.1| unknown protein
            [Arabidopsis thaliana] gi|332004228|gb|AED91611.1| WD and
            tetratricopeptide repeats protein 1 [Arabidopsis
            thaliana]
          Length = 757

 Score =  429 bits (1104), Expect = e-118
 Identities = 205/294 (69%), Positives = 245/294 (83%), Gaps = 5/294 (1%)
 Frame = +2

Query: 140  MDRWSYADGNIARILDNRRTDPARDINLKLQMHSSFIQRLTLKKEMEGHQGCVNALAWNS 319
            MD  S+ DGNI  +L  R  DP+ +++ ++Q HSS ++RL+ ++E+EGHQGCVNALAWNS
Sbjct: 1    MDNLSFHDGNIFNLLHTRSQDPSHEVDQRMQFHSSLVRRLSQEQELEGHQGCVNALAWNS 60

Query: 320  KGSLLISGSDDTCLNIWSYTNGDLVQSIDTGHNANIFCTKFVPETSDELVVSGAADAEVR 499
             GSLLISGSDD  +NIW+Y++  L+ SIDTGH ANIFCTKFVPETSDELVVSGA DAEVR
Sbjct: 61   NGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAEVR 120

Query: 500  LFNLSRVIG-----DAVEPSGVFQCHSRRVKKLAVEVGNPNVVWSASEDGTLRQYDFREG 664
            LFN SR+ G     +A+ PS ++QCH+RRVKKLAVE GNPNVVWSASEDGTLRQ+DFRE 
Sbjct: 121  LFNTSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNPNVVWSASEDGTLRQHDFRES 180

Query: 665  ASCPPVGSTNQECRHVLLDLRCGAKKSLADPPGHCLHLKSCDISSTRPHQILVGGSDAFG 844
             SCPP G+ +QECR VLLDLR GAK++LADPP   L LKSCDIS+TRPH +LVGGSDAF 
Sbjct: 181  TSCPPAGTAHQECRSVLLDLRSGAKRALADPPKQTLSLKSCDISATRPHLLLVGGSDAFA 240

Query: 845  RLYDRRMLPPLSSSQTKMKLPPCVTYFCPVHLAERRRSSLNLTHVTFSPNGEEV 1006
            RLYDRRMLPPL+SS+ +M  PPCV YFCP+HL+ER R++L+LTHVTFSPNGEEV
Sbjct: 241  RLYDRRMLPPLASSRKRMPPPPCVNYFCPMHLSERGRTNLHLTHVTFSPNGEEV 294


Top