BLASTX nr result

ID: Dioscorea21_contig00019214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019214
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269363.1| PREDICTED: uncharacterized protein LOC100255...   152   3e-35
ref|XP_002513009.1| DNA binding protein, putative [Ricinus commu...   147   1e-33
ref|XP_002305468.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_003540948.1| PREDICTED: uncharacterized protein LOC780560...   143   2e-32
ref|XP_004170187.1| PREDICTED: uncharacterized protein LOC101227...   134   1e-29

>ref|XP_002269363.1| PREDICTED: uncharacterized protein LOC100255631 [Vitis vinifera]
          Length = 589

 Score =  152 bits (385), Expect = 3e-35
 Identities = 106/205 (51%), Positives = 124/205 (60%), Gaps = 24/205 (11%)
 Frame = -3

Query: 545 SSRVGGADGLPPRKAHRRSQSDIPFAFSQSPLPMNAIPPL-PQRSLAFVERS--GVHN-- 381
           S RVG  + LPPRKAHRRS SDIPF FS     M + PPL P R    +ERS  G  N  
Sbjct: 171 SMRVG--ENLPPRKAHRRSSSDIPFGFSSI---MQSSPPLIPLRGSGALERSMSGRDNNM 225

Query: 380 ------QLVKQESEWDREGESSAE----RKSEGESGDDLFTAFMNLDGLDALNSSGTEDR 231
                 QLVK+ES W+R G+S+AE    RKSEGE  DDL +A+MNLD +DALNS GTE++
Sbjct: 226 AAAKPVQLVKRESSWERGGDSNAEGMGERKSEGEVVDDLLSAYMNLDNIDALNSPGTEEK 285

Query: 230 -----RE--DSRASGTKTNGADXXXXXXXXXXXXXXXXXST--QRPSTEKREGVKRSAAG 78
                RE  DSRASGTKTNG D                        S EKREGVKRSA G
Sbjct: 286 NGTENREDLDSRASGTKTNGGDSSDNEAESSVNESGNSMQKLGTSSSAEKREGVKRSAGG 345

Query: 77  NLAPITMTSRHCRSVSVDSFMSKLH 3
           ++AP   T+RH RSVS+DSFM K++
Sbjct: 346 DIAP---TTRHYRSVSMDSFMGKMN 367


>ref|XP_002513009.1| DNA binding protein, putative [Ricinus communis]
           gi|223548020|gb|EEF49512.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 574

 Score =  147 bits (371), Expect = 1e-33
 Identities = 100/199 (50%), Positives = 121/199 (60%), Gaps = 18/199 (9%)
 Frame = -3

Query: 545 SSRVGGADGLPPRKAHRRSQSDIPFAFS---QSPLPMNAIPPLP--QRSLAFVERSGVHN 381
           +SRV  A+ LPPRKAHRRS SDIPF  S   QS  P+  + P    +RS++  E S V  
Sbjct: 170 ASRV--AESLPPRKAHRRSNSDIPFGLSYVMQSSPPLIPLRPSGGLERSVSGKENSSVAK 227

Query: 380 QLVKQESEWDREGESSAE----RKSEGESGDDLFTAFMNLDGLDALNSSGTEDR-----R 228
                + EW+R  +S AE    RKSEGE  DDLF+A+MNLD +DALNSSGT+D+     R
Sbjct: 228 PTQLVKKEWERGNDSIAEGMGERKSEGEVVDDLFSAYMNLDTIDALNSSGTDDKNGNENR 287

Query: 227 E--DSRASGTKTNGADXXXXXXXXXXXXXXXXXSTQ--RPSTEKREGVKRSAAGNLAPIT 60
           E  DSRASGTKTNG D                        STEKREG+KRSA G++AP  
Sbjct: 288 EDLDSRASGTKTNGGDSSDNEAESSVNESGSSLLRAGVNSSTEKREGIKRSAGGDIAP-- 345

Query: 59  MTSRHCRSVSVDSFMSKLH 3
            T+RH RSVS+DSFM KL+
Sbjct: 346 -TTRHYRSVSMDSFMGKLN 363


>ref|XP_002305468.1| predicted protein [Populus trichocarpa] gi|222848432|gb|EEE85979.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score =  145 bits (366), Expect = 4e-33
 Identities = 95/195 (48%), Positives = 116/195 (59%), Gaps = 21/195 (10%)
 Frame = -3

Query: 524 DGLPPRKAHRRSQSDIPFAFSQSPLPMNAIPPL-PQRSLAFVERS-------GVHNQLVK 369
           + LPPRKAHRRS SDIPF  +     +   PPL P R  + +ERS       G+      
Sbjct: 80  ESLPPRKAHRRSNSDIPFGLANV---LQCSPPLIPSRGSSGLERSMSGRENLGMAKPAQS 136

Query: 368 QESEWDREGESSAE----RKSEGESGDDLFTAFMNLDGLDALNSSGTEDR-----RE--D 222
            + EW+R G+S+AE    RKSEGE  DDLF+A+MNLD +D LNSSGT+D+     RE  D
Sbjct: 137 VKKEWERGGDSNAEGMGERKSEGEVVDDLFSAYMNLDNIDVLNSSGTDDKNGNENREDLD 196

Query: 221 SRASGTKTNGADXXXXXXXXXXXXXXXXXSTQ--RPSTEKREGVKRSAAGNLAPITMTSR 48
           SRASGTKTNG D                        STEKREG+KRSA G++AP   T+R
Sbjct: 197 SRASGTKTNGGDSSDNEAESSVNESGGNLPRAGLSSSTEKREGIKRSAGGDIAP---TTR 253

Query: 47  HCRSVSVDSFMSKLH 3
           H RSVS+DSFM KL+
Sbjct: 254 HYRSVSMDSFMGKLN 268


>ref|XP_003540948.1| PREDICTED: uncharacterized protein LOC780560 [Glycine max]
          Length = 538

 Score =  143 bits (361), Expect = 2e-32
 Identities = 94/181 (51%), Positives = 112/181 (61%), Gaps = 9/181 (4%)
 Frame = -3

Query: 518 LPPRKAHRRSQSDIPFAFSQSPLPMNAIPPL-PQRSLAFVERSGVHNQLVKQESEWDREG 342
           LPPRKAHRRS SDIPF FS     + + PPL P R+    + +    QLVK+E+ WDREG
Sbjct: 153 LPPRKAHRRSNSDIPFGFSTV---LQSSPPLIPLRNPVSAKPA----QLVKRETPWDREG 205

Query: 341 ESSAERKS-EGESGDDLFTAFMNLDGLDALNSSGTEDRRE-------DSRASGTKTNGAD 186
             S E+KS EGE  DDLF+A+MNLD  DALNSSGT+D+         DSRASGTKTNG D
Sbjct: 206 --SGEKKSPEGEVVDDLFSAYMNLDSFDALNSSGTDDKNGGENRDDLDSRASGTKTNGGD 263

Query: 185 XXXXXXXXXXXXXXXXXSTQRPSTEKREGVKRSAAGNLAPITMTSRHCRSVSVDSFMSKL 6
                              Q    EKREG+KRSA G +AP   T+RH RSVS+DSF+ KL
Sbjct: 264 SSDNEAESSVNESGDGGVRQ-GGNEKREGMKRSAGGEIAP---TTRHYRSVSMDSFIGKL 319

Query: 5   H 3
           +
Sbjct: 320 N 320


>ref|XP_004170187.1| PREDICTED: uncharacterized protein LOC101227308 [Cucumis sativus]
          Length = 566

 Score =  134 bits (337), Expect = 1e-29
 Identities = 98/203 (48%), Positives = 120/203 (59%), Gaps = 23/203 (11%)
 Frame = -3

Query: 545 SSRVGGADGLPPRKAHRRSQSDIPFAFSQ----SPL-PMNAIPPLPQRSLAFVERSGV-- 387
           SS++G  D LPPRKAHRRS SDIPF  S     SPL P N+   L +RS +  E +G+  
Sbjct: 163 SSKMG--DSLPPRKAHRRSNSDIPFGLSSMIQPSPLLPFNSSGGL-ERSTSSKENAGLLK 219

Query: 386 -HNQLVKQESEW----DREGESSAERKSEGESGDDLFTAFMNLDGLDALNSSGTEDR--- 231
             +Q VK+E       D   E   ERKS+G+S DDLF+A+MNLD +D  NSSGT D+   
Sbjct: 220 PSSQFVKREHSLEKSVDNNLEGMGERKSDGDSVDDLFSAYMNLDHIDLFNSSGTNDKNGH 279

Query: 230 --RE--DSRASGTKTNGADXXXXXXXXXXXXXXXXXSTQRP----STEKREGVKRSAAGN 75
             RE  DSR SGTKTNG +                 S Q P    S EKREG+KR+A G+
Sbjct: 280 ENREDLDSRGSGTKTNGGE--SSDNEAESSVNESGDSAQMPGLNSSAEKREGIKRTAGGD 337

Query: 74  LAPITMTSRHCRSVSVDSFMSKL 6
           +AP   T+RH RSVS+DSFM KL
Sbjct: 338 IAP---TTRHYRSVSMDSFMGKL 357


Top