BLASTX nr result

ID: Dioscorea21_contig00019159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019159
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66937.1| hypothetical protein VITISV_006217 [Vitis vinifera]   113   2e-23
ref|XP_002442725.1| hypothetical protein SORBIDRAFT_08g001830 [S...   108   3e-22
gb|ABK23568.1| unknown [Picea sitchensis]                             108   5e-22
ref|XP_002323855.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_004137410.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   107   1e-21

>emb|CAN66937.1| hypothetical protein VITISV_006217 [Vitis vinifera]
          Length = 135

 Score =  113 bits (282), Expect = 2e-23
 Identities = 55/88 (62%), Positives = 65/88 (73%), Gaps = 1/88 (1%)
 Frame = -1

Query: 293 KKTSNGSANP-KDMKNKTRLVRYKECRKNHAAEIGGYAVDGCREFMASGEEGTSQALYCA 117
           K+  N +  P K +  K + V YKECRKNHAA IGGYAVDGCREFMA+GEEGTS +  CA
Sbjct: 47  KEQKNAAVFPEKALSYKEKNVIYKECRKNHAASIGGYAVDGCREFMAAGEEGTSASFKCA 106

Query: 116 ACTCHRSFHKREVEDEALSDYSSNSGTL 33
           AC+CHR+FH++EVE E   D SS S TL
Sbjct: 107 ACSCHRNFHRKEVESECFCDCSSISTTL 134


>ref|XP_002442725.1| hypothetical protein SORBIDRAFT_08g001830 [Sorghum bicolor]
           gi|241943418|gb|EES16563.1| hypothetical protein
           SORBIDRAFT_08g001830 [Sorghum bicolor]
          Length = 92

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/93 (56%), Positives = 66/93 (70%)
 Frame = -1

Query: 314 MKSQQDPKKTSNGSANPKDMKNKTRLVRYKECRKNHAAEIGGYAVDGCREFMASGEEGTS 135
           M  QQD +  +NG+A     K   ++V Y+EC++NHAA IGG+AVDGCREFMASG EGT+
Sbjct: 1   MGPQQDRRSMANGTAARS--KEAAKVVHYRECQRNHAASIGGHAVDGCREFMASGAEGTA 58

Query: 134 QALYCAACTCHRSFHKREVEDEALSDYSSNSGT 36
            AL CAAC CHRSFH+REVE     D SS + +
Sbjct: 59  AALMCAACGCHRSFHRREVETADDRDCSSTTSS 91


>gb|ABK23568.1| unknown [Picea sitchensis]
          Length = 154

 Score =  108 bits (270), Expect = 5e-22
 Identities = 47/64 (73%), Positives = 53/64 (82%)
 Frame = -1

Query: 245 TRLVRYKECRKNHAAEIGGYAVDGCREFMASGEEGTSQALYCAACTCHRSFHKREVEDEA 66
           T  VRY+ECRKNHAA IGGYAVDGC EFM SGEEGT+ A+ CAAC CHRSFH+RE E+E 
Sbjct: 86  TNRVRYRECRKNHAASIGGYAVDGCAEFMGSGEEGTAAAMKCAACNCHRSFHRREAENET 145

Query: 65  LSDY 54
           L +Y
Sbjct: 146 LCEY 149


>ref|XP_002323855.1| predicted protein [Populus trichocarpa] gi|222866857|gb|EEF03988.1|
           predicted protein [Populus trichocarpa]
          Length = 96

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/92 (57%), Positives = 63/92 (68%)
 Frame = -1

Query: 317 MMKSQQDPKKTSNGSANPKDMKNKTRLVRYKECRKNHAAEIGGYAVDGCREFMASGEEGT 138
           M K Q   +++   S +        R V+Y EC+KNHAA +GGYAVDGCREFMASGEEGT
Sbjct: 1   MRKRQVVVRRSEEPSRSSTTSSFTIRNVKYGECQKNHAAGVGGYAVDGCREFMASGEEGT 60

Query: 137 SQALYCAACTCHRSFHKREVEDEALSDYSSNS 42
           + AL CAAC CHR+FH+REVE E   D SS S
Sbjct: 61  AAALTCAACGCHRNFHRREVETEVACDCSSPS 92


>ref|XP_004137410.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Cucumis sativus]
          Length = 105

 Score =  107 bits (267), Expect = 1e-21
 Identities = 55/102 (53%), Positives = 68/102 (66%), Gaps = 13/102 (12%)
 Frame = -1

Query: 317 MMKSQQDPKKTSN---GSANPKDMKNKTR----------LVRYKECRKNHAAEIGGYAVD 177
           MMK +Q   K S+   GS++     N  R          +VRY EC+KNHAA IGGYAVD
Sbjct: 2   MMKKRQVVVKRSSEGGGSSSSSSANNNNRNISSSSRVRSVVRYGECQKNHAANIGGYAVD 61

Query: 176 GCREFMASGEEGTSQALYCAACTCHRSFHKREVEDEALSDYS 51
           GCREF+A+GEEG+  AL CAAC CHR+FH+REVE E + +YS
Sbjct: 62  GCREFLATGEEGSHGALTCAACGCHRNFHRREVESEVVCEYS 103


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