BLASTX nr result

ID: Dioscorea21_contig00019157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019157
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518609.1| PREDICTED: mitochondrial RNA-splicing protei...   185   4e-45
gb|ACE97997.1| mitochondrial substrate carrier [Populus tremula]      180   1e-43
gb|ACE97995.1| mitochondrial substrate carrier [Populus tremula]      180   1e-43
gb|ACE97985.1| mitochondrial substrate carrier [Populus tremula]      180   1e-43
gb|ACE97974.1| mitochondrial substrate carrier [Populus tremula]...   180   1e-43

>ref|XP_003518609.1| PREDICTED: mitochondrial RNA-splicing protein MRS4-like [Glycine
           max]
          Length = 364

 Score =  185 bits (470), Expect = 4e-45
 Identities = 90/142 (63%), Positives = 107/142 (75%)
 Frame = +3

Query: 159 PILKDLPSFERXXXXXXXXXXXXXFTYVCLLPIDAVKTKLQTKGAANLYSNALDAAIHTL 338
           P+LK L   +R             FTYVCLLP+DA+KTK+QTKGAA +Y N LDA + T 
Sbjct: 56  PLLKTLSVLDRALIGAAAGGLAGAFTYVCLLPLDAIKTKMQTKGAAQIYKNTLDAIVKTF 115

Query: 339 RTEGPIGFYRGVSAVLVGSATSSAIYFGTCELGKSVLGRLPSFPRIFIPPTAGVMGNIVS 518
           ++EG +GFY GVSAV+VGS  SSA+YFGTCE GKS L +L +FP + IPPTAG MGNI+S
Sbjct: 116 QSEGILGFYSGVSAVVVGSTASSAVYFGTCEFGKSFLSKLEAFPAVLIPPTAGAMGNIMS 175

Query: 519 SAIMVPKELITQRMQTGARGRS 584
           SAIMVPKELITQRMQ GA+GRS
Sbjct: 176 SAIMVPKELITQRMQAGAKGRS 197


>gb|ACE97997.1| mitochondrial substrate carrier [Populus tremula]
          Length = 308

 Score =  180 bits (457), Expect = 1e-43
 Identities = 95/168 (56%), Positives = 114/168 (67%), Gaps = 11/168 (6%)
 Frame = +3

Query: 114 SSTSLRFAPRS------TSRGP-----ILKDLPSFERXXXXXXXXXXXXXFTYVCLLPID 260
           S  S  FAP+S      TSR       ++K+L  FER             FTYVCL P+D
Sbjct: 22  SLNSQIFAPKSPKWLQSTSRNSPKVQSLMKNLSVFERALIGAGGGGIAGAFTYVCLHPLD 81

Query: 261 AVKTKLQTKGAANLYSNALDAAIHTLRTEGPIGFYRGVSAVLVGSATSSAIYFGTCELGK 440
            +KTKLQTKGA+ +Y N LDA I T + +G +GFY GVSAV+VGS  SSA+YFGTCE GK
Sbjct: 82  TIKTKLQTKGASQIYKNTLDAVIKTFQDKGVLGFYSGVSAVIVGSTASSAVYFGTCEFGK 141

Query: 441 SVLGRLPSFPRIFIPPTAGVMGNIVSSAIMVPKELITQRMQTGARGRS 584
           S+L +   +P + IPPTAG MGNIVSSAIMVPKELITQ+MQ GA+GRS
Sbjct: 142 SILSKFEKYPSVLIPPTAGAMGNIVSSAIMVPKELITQQMQAGAKGRS 189


>gb|ACE97995.1| mitochondrial substrate carrier [Populus tremula]
          Length = 308

 Score =  180 bits (457), Expect = 1e-43
 Identities = 95/168 (56%), Positives = 114/168 (67%), Gaps = 11/168 (6%)
 Frame = +3

Query: 114 SSTSLRFAPRS------TSRGP-----ILKDLPSFERXXXXXXXXXXXXXFTYVCLLPID 260
           S  S  FAP+S      TSR       ++K+L  FER             FTYVCL P+D
Sbjct: 22  SLNSQIFAPKSPKWLQSTSRNSPKVQSLMKNLSVFERALIGAGGGGIAGAFTYVCLHPLD 81

Query: 261 AVKTKLQTKGAANLYSNALDAAIHTLRTEGPIGFYRGVSAVLVGSATSSAIYFGTCELGK 440
            +KTKLQTKGA+ +Y N LDA I T + +G +GFY GVSAV+VGS  SSA+YFGTCE GK
Sbjct: 82  TIKTKLQTKGASQIYKNTLDAVIKTFQDKGVLGFYSGVSAVIVGSTASSAVYFGTCEFGK 141

Query: 441 SVLGRLPSFPRIFIPPTAGVMGNIVSSAIMVPKELITQRMQTGARGRS 584
           S+L +   +P + IPPTAG MGNIVSSAIMVPKELITQ+MQ GA+GRS
Sbjct: 142 SILSKFEKYPSVLIPPTAGAMGNIVSSAIMVPKELITQQMQAGAKGRS 189


>gb|ACE97985.1| mitochondrial substrate carrier [Populus tremula]
          Length = 308

 Score =  180 bits (457), Expect = 1e-43
 Identities = 95/168 (56%), Positives = 114/168 (67%), Gaps = 11/168 (6%)
 Frame = +3

Query: 114 SSTSLRFAPRS------TSRGP-----ILKDLPSFERXXXXXXXXXXXXXFTYVCLLPID 260
           S  S  FAP+S      TSR       ++K+L  FER             FTYVCL P+D
Sbjct: 22  SLNSQIFAPKSPKWLQSTSRNSPKVQSLMKNLSVFERALIGAGGGGIAGAFTYVCLHPLD 81

Query: 261 AVKTKLQTKGAANLYSNALDAAIHTLRTEGPIGFYRGVSAVLVGSATSSAIYFGTCELGK 440
            +KTKLQTKGA+ +Y N LDA I T + +G +GFY GVSAV+VGS  SSA+YFGTCE GK
Sbjct: 82  TIKTKLQTKGASQIYKNTLDAVIKTFQDKGVLGFYSGVSAVIVGSTASSAVYFGTCEFGK 141

Query: 441 SVLGRLPSFPRIFIPPTAGVMGNIVSSAIMVPKELITQRMQTGARGRS 584
           S+L +   +P + IPPTAG MGNIVSSAIMVPKELITQ+MQ GA+GRS
Sbjct: 142 SILSKFEKYPSVLIPPTAGAMGNIVSSAIMVPKELITQQMQAGAKGRS 189


>gb|ACE97974.1| mitochondrial substrate carrier [Populus tremula]
           gi|190898924|gb|ACE97975.1| mitochondrial substrate
           carrier [Populus tremula] gi|190898926|gb|ACE97976.1|
           mitochondrial substrate carrier [Populus tremula]
           gi|190898928|gb|ACE97977.1| mitochondrial substrate
           carrier [Populus tremula] gi|190898930|gb|ACE97978.1|
           mitochondrial substrate carrier [Populus tremula]
           gi|190898932|gb|ACE97979.1| mitochondrial substrate
           carrier [Populus tremula] gi|190898948|gb|ACE97987.1|
           mitochondrial substrate carrier [Populus tremula]
           gi|190898952|gb|ACE97989.1| mitochondrial substrate
           carrier [Populus tremula] gi|190898954|gb|ACE97990.1|
           mitochondrial substrate carrier [Populus tremula]
           gi|190898956|gb|ACE97991.1| mitochondrial substrate
           carrier [Populus tremula] gi|190898958|gb|ACE97992.1|
           mitochondrial substrate carrier [Populus tremula]
           gi|190898960|gb|ACE97993.1| mitochondrial substrate
           carrier [Populus tremula] gi|190898966|gb|ACE97996.1|
           mitochondrial substrate carrier [Populus tremula]
           gi|190898970|gb|ACE97998.1| mitochondrial substrate
           carrier [Populus tremula] gi|190898974|gb|ACE98000.1|
           mitochondrial substrate carrier [Populus tremula]
           gi|190898976|gb|ACE98001.1| mitochondrial substrate
           carrier [Populus tremula] gi|190898978|gb|ACE98002.1|
           mitochondrial substrate carrier [Populus tremula]
           gi|190898980|gb|ACE98003.1| mitochondrial substrate
           carrier [Populus tremula] gi|190898982|gb|ACE98004.1|
           mitochondrial substrate carrier [Populus tremula]
           gi|190898984|gb|ACE98005.1| mitochondrial substrate
           carrier [Populus tremula] gi|190898986|gb|ACE98006.1|
           mitochondrial substrate carrier [Populus tremula]
           gi|190898988|gb|ACE98007.1| mitochondrial substrate
           carrier [Populus tremula] gi|190898990|gb|ACE98008.1|
           mitochondrial substrate carrier [Populus tremula]
           gi|190898992|gb|ACE98009.1| mitochondrial substrate
           carrier [Populus tremula] gi|190898994|gb|ACE98010.1|
           mitochondrial substrate carrier [Populus tremula]
          Length = 308

 Score =  180 bits (457), Expect = 1e-43
 Identities = 95/168 (56%), Positives = 114/168 (67%), Gaps = 11/168 (6%)
 Frame = +3

Query: 114 SSTSLRFAPRS------TSRGP-----ILKDLPSFERXXXXXXXXXXXXXFTYVCLLPID 260
           S  S  FAP+S      TSR       ++K+L  FER             FTYVCL P+D
Sbjct: 22  SLNSQIFAPKSPKWLQSTSRNSPKVQSLMKNLSVFERALIGAGGGGIAGAFTYVCLHPLD 81

Query: 261 AVKTKLQTKGAANLYSNALDAAIHTLRTEGPIGFYRGVSAVLVGSATSSAIYFGTCELGK 440
            +KTKLQTKGA+ +Y N LDA I T + +G +GFY GVSAV+VGS  SSA+YFGTCE GK
Sbjct: 82  TIKTKLQTKGASQIYKNTLDAVIKTFQDKGVLGFYSGVSAVIVGSTASSAVYFGTCEFGK 141

Query: 441 SVLGRLPSFPRIFIPPTAGVMGNIVSSAIMVPKELITQRMQTGARGRS 584
           S+L +   +P + IPPTAG MGNIVSSAIMVPKELITQ+MQ GA+GRS
Sbjct: 142 SILSKFEKYPSVLIPPTAGAMGNIVSSAIMVPKELITQQMQAGAKGRS 189


Top