BLASTX nr result

ID: Dioscorea21_contig00019146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019146
         (1468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD07814.1| putative ribosomal protein S5 [Oryza sativa Japo...   602   e-170
gb|EAY84083.1| hypothetical protein OsI_05464 [Oryza sativa Indi...   600   e-169
ref|XP_003573697.1| PREDICTED: uncharacterized protein LOC100830...   598   e-169
dbj|BAJ90023.1| predicted protein [Hordeum vulgare subsp. vulgare]    593   e-167
gb|AFW69702.1| structural constituent of ribosome [Zea mays]          588   e-165

>dbj|BAD07814.1| putative ribosomal protein S5 [Oryza sativa Japonica Group]
            gi|41053236|dbj|BAD08197.1| putative ribosomal protein S5
            [Oryza sativa Japonica Group]
            gi|215768553|dbj|BAH00782.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 501

 Score =  602 bits (1552), Expect = e-170
 Identities = 294/360 (81%), Positives = 323/360 (89%), Gaps = 1/360 (0%)
 Frame = +3

Query: 390  DQFWEPTDSESDD-DERYSVEEVKKRVDAFENKCKRFGELLKSFAESETLDDAHKWMTKI 566
            D FWEPTDS+SD+ DERY+ + +K+RVD FE KC R  ELL+SFAE+ETLDDAHKWMTKI
Sbjct: 119  DSFWEPTDSDSDEEDERYTPDAIKRRVDEFERKCNRHSELLRSFAEAETLDDAHKWMTKI 178

Query: 567  DKFEERHLKLPLEYRVIGDMMNRLKQTTGKDRFILLQKLNRAVRLMECKEAYDPNNPANF 746
            D+FEERHLKLPLEYRVIGDMMNRLK  TGKDRF+LLQKLNRAVR+MEC+EAYDP+NP+NF
Sbjct: 179  DRFEERHLKLPLEYRVIGDMMNRLKDATGKDRFLLLQKLNRAVRIMECREAYDPSNPSNF 238

Query: 747  GVIQHQQVGSPEDVVDNSGFEREKQMIKGASLEDDDEDLNETKEKDDVLIEKLNDXXXXX 926
            GVIQHQQVGSPED+V N+GF+REKQMI+GA  +DDDE+ NE KEKDD+LIEKLN      
Sbjct: 239  GVIQHQQVGSPEDLVLNAGFDREKQMIQGAGDDDDDEEFNEDKEKDDLLIEKLNSIEKKI 298

Query: 927  XXXXXXXDHTFGKKGRVLEEEIKDLVEERNSLTEKRRRPLYRKGFDVKVIDVNRTVKVTK 1106
                   DHTFGKKGRVLEEEIKDLVEERNSLTE +RRP+YRKGFDVKVIDVNRT KVTK
Sbjct: 299  EEKLAELDHTFGKKGRVLEEEIKDLVEERNSLTEHKRRPMYRKGFDVKVIDVNRTCKVTK 358

Query: 1107 GGQLVKFTALLATGNYHGVVGFAKAKGPNAKIAIQRAYEKCFQNLHYVERYEEHTIAHAI 1286
            GGQ+ KFTALLATGNYHGVVGFAKA+GP AKIAIQRAYEKCFQ+LHY+ERYE+HTIAHAI
Sbjct: 359  GGQIAKFTALLATGNYHGVVGFAKARGPTAKIAIQRAYEKCFQDLHYMERYEDHTIAHAI 418

Query: 1287 HTQYEKTKIYLWPGPMRSGMSAASRTVETVLYLAGFSNVKSKIIGSRNPLNVIKALFKAL 1466
              +YEKTKIYLWPGPMRSGMSAA RTVETVLYLAGFSNVKSKIIGSRNPLNVIKALF AL
Sbjct: 419  QAKYEKTKIYLWPGPMRSGMSAAGRTVETVLYLAGFSNVKSKIIGSRNPLNVIKALFIAL 478


>gb|EAY84083.1| hypothetical protein OsI_05464 [Oryza sativa Indica Group]
          Length = 501

 Score =  600 bits (1547), Expect = e-169
 Identities = 293/360 (81%), Positives = 323/360 (89%), Gaps = 1/360 (0%)
 Frame = +3

Query: 390  DQFWEPTDSESDD-DERYSVEEVKKRVDAFENKCKRFGELLKSFAESETLDDAHKWMTKI 566
            D FWEPTDS+SD+ DERY+ + +K+RVD FE KC R  ELL+SFAE+ETLDDAHKWMTKI
Sbjct: 119  DSFWEPTDSDSDEEDERYTPDAIKRRVDEFERKCNRHSELLRSFAEAETLDDAHKWMTKI 178

Query: 567  DKFEERHLKLPLEYRVIGDMMNRLKQTTGKDRFILLQKLNRAVRLMECKEAYDPNNPANF 746
            D+FEERHLKLPLEYRVIGDMMNRLK  TGKDRF+LLQKLNRAVR+MEC+EAYDP+NP+NF
Sbjct: 179  DRFEERHLKLPLEYRVIGDMMNRLKDATGKDRFLLLQKLNRAVRIMECREAYDPSNPSNF 238

Query: 747  GVIQHQQVGSPEDVVDNSGFEREKQMIKGASLEDDDEDLNETKEKDDVLIEKLNDXXXXX 926
            GVIQHQQVGSPED+V N+GF+REKQMI+GA  ++DDE+ NE KEKDD+LIEKLN      
Sbjct: 239  GVIQHQQVGSPEDLVLNAGFDREKQMIQGAGDDNDDEEFNEDKEKDDLLIEKLNSIEKKI 298

Query: 927  XXXXXXXDHTFGKKGRVLEEEIKDLVEERNSLTEKRRRPLYRKGFDVKVIDVNRTVKVTK 1106
                   DHTFGKKGRVLEEEIKDLVEERNSLTE +RRP+YRKGFDVKVIDVNRT KVTK
Sbjct: 299  EEKLAELDHTFGKKGRVLEEEIKDLVEERNSLTEHKRRPMYRKGFDVKVIDVNRTCKVTK 358

Query: 1107 GGQLVKFTALLATGNYHGVVGFAKAKGPNAKIAIQRAYEKCFQNLHYVERYEEHTIAHAI 1286
            GGQ+ KFTALLATGNYHGVVGFAKA+GP AKIAIQRAYEKCFQ+LHY+ERYE+HTIAHAI
Sbjct: 359  GGQIAKFTALLATGNYHGVVGFAKARGPTAKIAIQRAYEKCFQDLHYMERYEDHTIAHAI 418

Query: 1287 HTQYEKTKIYLWPGPMRSGMSAASRTVETVLYLAGFSNVKSKIIGSRNPLNVIKALFKAL 1466
              +YEKTKIYLWPGPMRSGMSAA RTVETVLYLAGFSNVKSKIIGSRNPLNVIKALF AL
Sbjct: 419  QAKYEKTKIYLWPGPMRSGMSAAGRTVETVLYLAGFSNVKSKIIGSRNPLNVIKALFIAL 478


>ref|XP_003573697.1| PREDICTED: uncharacterized protein LOC100830533 [Brachypodium
            distachyon]
          Length = 516

 Score =  598 bits (1543), Expect = e-169
 Identities = 292/360 (81%), Positives = 324/360 (90%), Gaps = 1/360 (0%)
 Frame = +3

Query: 390  DQFWEPTDSESD-DDERYSVEEVKKRVDAFENKCKRFGELLKSFAESETLDDAHKWMTKI 566
            D FWEPTDS+SD DDER+S + +K+RVD F+ KCKR  ELL+SFA++ETLDDAHK M KI
Sbjct: 134  DTFWEPTDSDSDEDDERFSPDSIKRRVDEFDRKCKRHSELLRSFAQAETLDDAHKLMIKI 193

Query: 567  DKFEERHLKLPLEYRVIGDMMNRLKQTTGKDRFILLQKLNRAVRLMECKEAYDPNNPANF 746
            DKFE+RHLKLPLEYRVIGDMMNRLK  TGK+RFILLQKLNRAVRLMECKEAYDP+NPANF
Sbjct: 194  DKFEQRHLKLPLEYRVIGDMMNRLKDATGKERFILLQKLNRAVRLMECKEAYDPSNPANF 253

Query: 747  GVIQHQQVGSPEDVVDNSGFEREKQMIKGASLEDDDEDLNETKEKDDVLIEKLNDXXXXX 926
            GVIQHQQVGSP+DV+DN+GF++EKQMI+GA+ E+D+E+ NE KEKDD+LIEKLN      
Sbjct: 254  GVIQHQQVGSPDDVIDNAGFDKEKQMIQGANEEEDNEEFNEVKEKDDLLIEKLNSIEKTI 313

Query: 927  XXXXXXXDHTFGKKGRVLEEEIKDLVEERNSLTEKRRRPLYRKGFDVKVIDVNRTVKVTK 1106
                   DHTFGKKGRVLEEEIKDLVEERNSLT+K+RRP+YRKGFDVKVIDVNRT KVTK
Sbjct: 314  EGKLADLDHTFGKKGRVLEEEIKDLVEERNSLTDKKRRPMYRKGFDVKVIDVNRTCKVTK 373

Query: 1107 GGQLVKFTALLATGNYHGVVGFAKAKGPNAKIAIQRAYEKCFQNLHYVERYEEHTIAHAI 1286
            GGQ+ K+TALLATGNYHGVVGFAKAKGP AKIAIQRAYEKCFQNLHY+ERYEEHTIAHAI
Sbjct: 374  GGQIAKYTALLATGNYHGVVGFAKAKGPTAKIAIQRAYEKCFQNLHYMERYEEHTIAHAI 433

Query: 1287 HTQYEKTKIYLWPGPMRSGMSAASRTVETVLYLAGFSNVKSKIIGSRNPLNVIKALFKAL 1466
              +YEKTKIYLWPGPMRSGM AA RTVETV+YLAGFSNVKSKIIGSR+PLNVIKALF AL
Sbjct: 434  QAKYEKTKIYLWPGPMRSGMCAAGRTVETVMYLAGFSNVKSKIIGSRSPLNVIKALFIAL 493


>dbj|BAJ90023.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 521

 Score =  593 bits (1528), Expect = e-167
 Identities = 291/360 (80%), Positives = 323/360 (89%), Gaps = 1/360 (0%)
 Frame = +3

Query: 390  DQFWEPTDSESD-DDERYSVEEVKKRVDAFENKCKRFGELLKSFAESETLDDAHKWMTKI 566
            + F EPTDSESD DDER+S + +++RVD FE KC+R  ELL+SFAE+ETLDDAHK+MTKI
Sbjct: 139  ESFMEPTDSESDEDDERFSDDSIQRRVDEFERKCQRQSELLRSFAEAETLDDAHKFMTKI 198

Query: 567  DKFEERHLKLPLEYRVIGDMMNRLKQTTGKDRFILLQKLNRAVRLMECKEAYDPNNPANF 746
            DKFE+RHL LPLEYRVIGDMMNRLK  TGK+RFILLQKLNRAVRLMECKEAYDP+NPANF
Sbjct: 199  DKFEQRHLSLPLEYRVIGDMMNRLKDATGKERFILLQKLNRAVRLMECKEAYDPSNPANF 258

Query: 747  GVIQHQQVGSPEDVVDNSGFEREKQMIKGASLEDDDEDLNETKEKDDVLIEKLNDXXXXX 926
            GVIQHQQV SP+DV+DN+GF++EKQMI+G SL+DD+E+ NE KEKDD+LIEKLN      
Sbjct: 259  GVIQHQQVDSPDDVIDNAGFDKEKQMIQGESLDDDEEEFNEVKEKDDMLIEKLNAIEKKI 318

Query: 927  XXXXXXXDHTFGKKGRVLEEEIKDLVEERNSLTEKRRRPLYRKGFDVKVIDVNRTVKVTK 1106
                   DHTFGKKGRVLEEEIKDLVEERNSLT+K+RRP+YRKGFDVKVIDVNRT KVTK
Sbjct: 319  EEKLADLDHTFGKKGRVLEEEIKDLVEERNSLTDKKRRPMYRKGFDVKVIDVNRTCKVTK 378

Query: 1107 GGQLVKFTALLATGNYHGVVGFAKAKGPNAKIAIQRAYEKCFQNLHYVERYEEHTIAHAI 1286
            GGQ+ K+TALLATGNYHGVVGFAKAKGP AKIAIQRAYEKCFQNLHY+ERYEEHTIAHAI
Sbjct: 379  GGQIAKYTALLATGNYHGVVGFAKAKGPTAKIAIQRAYEKCFQNLHYMERYEEHTIAHAI 438

Query: 1287 HTQYEKTKIYLWPGPMRSGMSAASRTVETVLYLAGFSNVKSKIIGSRNPLNVIKALFKAL 1466
              +YEKTKIYLWPGPMRSGM AA RTVETV+YLAGFSNVKSKIIGSR+PLNVIKALF AL
Sbjct: 439  QAKYEKTKIYLWPGPMRSGMCAAGRTVETVMYLAGFSNVKSKIIGSRSPLNVIKALFIAL 498


>gb|AFW69702.1| structural constituent of ribosome [Zea mays]
          Length = 555

 Score =  588 bits (1515), Expect = e-165
 Identities = 291/382 (76%), Positives = 325/382 (85%), Gaps = 1/382 (0%)
 Frame = +3

Query: 324  YMGVTPXXXXXXXXXXXXXXNIDQFWEPTDSESD-DDERYSVEEVKKRVDAFENKCKRFG 500
            YMGV P                + FWEPTDS+SD DDERY+ + +K+RVD FE KCKR  
Sbjct: 151  YMGVKPLIEKLERRKTKDMAAGEGFWEPTDSDSDEDDERYTPDAIKQRVDEFERKCKRHE 210

Query: 501  ELLKSFAESETLDDAHKWMTKIDKFEERHLKLPLEYRVIGDMMNRLKQTTGKDRFILLQK 680
            E L+SFAE++TLD+AHKWMTKI+ FEERHLKLPLEYRVIGDMMNRLK  TGK+RF+LLQK
Sbjct: 211  EFLQSFAEADTLDEAHKWMTKINNFEERHLKLPLEYRVIGDMMNRLKDATGKERFVLLQK 270

Query: 681  LNRAVRLMECKEAYDPNNPANFGVIQHQQVGSPEDVVDNSGFEREKQMIKGASLEDDDED 860
            LNRAVR+ME KEAYDP+NPANFG+IQHQQVGSPEDVV N+GF++EKQMI+GA LED DE+
Sbjct: 271  LNRAVRIMEIKEAYDPSNPANFGIIQHQQVGSPEDVVLNAGFDKEKQMIQGAELEDVDEE 330

Query: 861  LNETKEKDDVLIEKLNDXXXXXXXXXXXXDHTFGKKGRVLEEEIKDLVEERNSLTEKRRR 1040
             N+ KE+DD+LI+KL+             DHTFGKKGR LEEEIKDLVEERNSL+EK RR
Sbjct: 331  FNDVKERDDILIDKLDAIEKKIEGKLELLDHTFGKKGRALEEEIKDLVEERNSLSEKSRR 390

Query: 1041 PLYRKGFDVKVIDVNRTVKVTKGGQLVKFTALLATGNYHGVVGFAKAKGPNAKIAIQRAY 1220
            P+YRKGFDVKVIDVNRT KVTKGGQ+ KFTALLATGNY+GVVGFAKAKGP AKIAIQRAY
Sbjct: 391  PMYRKGFDVKVIDVNRTCKVTKGGQIAKFTALLATGNYNGVVGFAKAKGPTAKIAIQRAY 450

Query: 1221 EKCFQNLHYVERYEEHTIAHAIHTQYEKTKIYLWPGPMRSGMSAASRTVETVLYLAGFSN 1400
            EKCFQNLHY+ERYE+HTIAHAI  +YEKTKIYLWPGPMRSGMSAA RTVETVLYLAGFSN
Sbjct: 451  EKCFQNLHYMERYEDHTIAHAIQAKYEKTKIYLWPGPMRSGMSAAGRTVETVLYLAGFSN 510

Query: 1401 VKSKIIGSRNPLNVIKALFKAL 1466
            VK+KIIGSRNPLNVIKALF AL
Sbjct: 511  VKTKIIGSRNPLNVIKALFIAL 532


Top