BLASTX nr result

ID: Dioscorea21_contig00019128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019128
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]          124   1e-26
ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2...   123   1e-26
ref|XP_002326736.1| multidrug/pheromone exporter, MDR family, AB...   122   4e-26
ref|XP_002326737.1| multidrug/pheromone exporter, MDR family, AB...   121   7e-26
dbj|BAD07905.1| putative MDR-like ABC transporter [Oryza sativa ...   120   1e-25

>gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]
          Length = 1249

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/88 (68%), Positives = 72/88 (81%)
 Frame = +3

Query: 3    TEMVSDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFGDLDLRVSSGKTMALVGMSGSGKS 182
            T++V D G +   V G +ELKGV F YPSRPD VIF D DL+V SGK+MALVG SGSGKS
Sbjct: 987  TQVVGDAGEELTNVEGTIELKGVHFSYPSRPDVVIFKDFDLKVRSGKSMALVGQSGSGKS 1046

Query: 183  TVLALILRFYDPTAGKVMIDGKDIRKFQ 266
            +VLALILRFYDPT+GKVMIDG+D++K +
Sbjct: 1047 SVLALILRFYDPTSGKVMIDGRDVKKLK 1074



 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/81 (54%), Positives = 58/81 (71%)
 Frame = +3

Query: 15  SDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFGDLDLRVSSGKTMALVGMSGSGKSTVLA 194
           S  G    +V G +ELK V F YPSRPD VIF    L + +GK +ALVG SGSGKSTV++
Sbjct: 356 SKTGRKLSKVEGNIELKNVSFSYPSRPDVVIFDRFCLNIPTGKIVALVGGSGSGKSTVIS 415

Query: 195 LILRFYDPTAGKVMIDGKDIR 257
           LI RFY+P AG++++DG +I+
Sbjct: 416 LIERFYEPLAGEILLDGNNIK 436


>ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2 [Vitis vinifera]
            gi|297742073|emb|CBI33860.3| unnamed protein product
            [Vitis vinifera]
          Length = 1243

 Score =  123 bits (309), Expect = 1e-26
 Identities = 60/88 (68%), Positives = 73/88 (82%)
 Frame = +3

Query: 3    TEMVSDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFGDLDLRVSSGKTMALVGMSGSGKS 182
            TE++ D G +  RV G ++LKG++F YPSRPD VIF D DLRV +GK+MALVG SGSGKS
Sbjct: 982  TEVMGDAGEELTRVEGTIDLKGIEFRYPSRPDVVIFKDFDLRVRAGKSMALVGQSGSGKS 1041

Query: 183  TVLALILRFYDPTAGKVMIDGKDIRKFQ 266
            +VL+LILRFYDP AGKVMIDGKDI+K +
Sbjct: 1042 SVLSLILRFYDPIAGKVMIDGKDIKKLK 1069



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = +3

Query: 15  SDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFGDLDLRVSSGKTMALVGMSGSGKSTVLA 194
           S  G    ++ G ++ + + F YPSRPD +IF  L   + SGK +ALVG SGSGKSTV++
Sbjct: 351 SKTGRQLHKLEGHIQFRDISFSYPSRPDILIFNKLCFDIPSGKIVALVGGSGSGKSTVIS 410

Query: 195 LILRFYDPTAGKVMIDGKDIRK 260
           LI RFY+P AG++++DG DIR+
Sbjct: 411 LIERFYEPLAGEILLDGNDIRQ 432


>ref|XP_002326736.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222834058|gb|EEE72535.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1230

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/88 (67%), Positives = 71/88 (80%)
 Frame = +3

Query: 3    TEMVSDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFGDLDLRVSSGKTMALVGMSGSGKS 182
            T+++ D G +   V G +EL+GV+F YPSRPD +IF D D RV SGK+MALVG SGSGKS
Sbjct: 972  TQVIGDAGEELKNVEGTIELRGVQFSYPSRPDTLIFKDFDFRVCSGKSMALVGQSGSGKS 1031

Query: 183  TVLALILRFYDPTAGKVMIDGKDIRKFQ 266
            +VLALILRFYDPTAGKVMIDG DI+K +
Sbjct: 1032 SVLALILRFYDPTAGKVMIDGIDIKKLK 1059



 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/81 (56%), Positives = 59/81 (72%)
 Frame = +3

Query: 15  SDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFGDLDLRVSSGKTMALVGMSGSGKSTVLA 194
           S  G   G++ G +E + V FCYPSRPD VIF    L + SGK +ALVG SGSGKSTV++
Sbjct: 342 SKTGQKLGKLEGHIEFRDVCFCYPSRPDVVIFNKFRLDIPSGKIVALVGGSGSGKSTVIS 401

Query: 195 LILRFYDPTAGKVMIDGKDIR 257
           LI RFY+P +GK+++DG DIR
Sbjct: 402 LIERFYEPLSGKILLDGNDIR 422


>ref|XP_002326737.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222834059|gb|EEE72536.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1285

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/88 (68%), Positives = 72/88 (81%)
 Frame = +3

Query: 3    TEMVSDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFGDLDLRVSSGKTMALVGMSGSGKS 182
            T+++ D G +   V G +EL+GV+F YPSRPD +IF D DLRV SGK+MALVG SGSGKS
Sbjct: 1015 TQVMGDVGEELKNVKGTIELRGVQFSYPSRPDTLIFMDFDLRVRSGKSMALVGQSGSGKS 1074

Query: 183  TVLALILRFYDPTAGKVMIDGKDIRKFQ 266
            +VL+LILRFYDPTAGKVMIDG DIRK +
Sbjct: 1075 SVLSLILRFYDPTAGKVMIDGIDIRKLK 1102



 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/73 (57%), Positives = 53/73 (72%)
 Frame = +3

Query: 39  RVVGIVELKGVKFCYPSRPDDVIFGDLDLRVSSGKTMALVGMSGSGKSTVLALILRFYDP 218
           +V G +E K V F YPSRPD  IF    L + SGK +ALVG SGSGKSTV++LI RFY+P
Sbjct: 382 KVDGHIEFKDVCFGYPSRPDVTIFDKFCLDIPSGKIVALVGGSGSGKSTVISLIERFYEP 441

Query: 219 TAGKVMIDGKDIR 257
             G++++DG DIR
Sbjct: 442 LFGQILLDGNDIR 454


>dbj|BAD07905.1| putative MDR-like ABC transporter [Oryza sativa Japonica Group]
           gi|41053279|dbj|BAD07705.1| putative MDR-like ABC
           transporter [Oryza sativa Japonica Group]
          Length = 653

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/86 (67%), Positives = 73/86 (84%)
 Frame = +3

Query: 3   TEMVSDGGVDAGRVVGIVELKGVKFCYPSRPDDVIFGDLDLRVSSGKTMALVGMSGSGKS 182
           T+++ D G D  RV G++EL+GV+F YP+RP+ V+F  LDL + +GK+MALVGMSGSGKS
Sbjct: 386 TDVLIDAGNDVKRVEGVIELRGVEFRYPARPEVVVFKGLDLLMKAGKSMALVGMSGSGKS 445

Query: 183 TVLALILRFYDPTAGKVMIDGKDIRK 260
           TVL+LILRFYDP AGKV+IDGKDIRK
Sbjct: 446 TVLSLILRFYDPIAGKVLIDGKDIRK 471


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