BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019090
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200445.1| RING/U-box domain-containing protein [Arabidops...    92   1e-16
ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyra...    91   2e-16
ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    90   3e-16
ref|XP_003552191.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    90   4e-16
ref|XP_002303979.1| predicted protein [Populus trichocarpa] gi|2...    90   4e-16

>ref|NP_200445.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|10177832|dbj|BAB11261.1| unnamed protein product
           [Arabidopsis thaliana] gi|17380898|gb|AAL36261.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259581|gb|AAM14133.1| unknown protein [Arabidopsis
           thaliana] gi|332009368|gb|AED96751.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 396

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 42/82 (51%), Positives = 56/82 (68%), Gaps = 9/82 (10%)
 Frame = -3

Query: 612 MDENWSSRYWCHMCSQMVSPIMGIEIKCPYCDSGFVEEMQSRG---------NISDASTE 460
           M+E  ++RYWCHMCSQMV+P+M  EIKCP+C SGF+EEM   G         ++ D+ T+
Sbjct: 1   MEETMAARYWCHMCSQMVNPVMESEIKCPFCQSGFIEEMSGNGGGGGGRGIRDVQDSETD 60

Query: 459 LVSDRDRALSLWAPILFRLMNN 394
                DRALSLWAPIL  +M++
Sbjct: 61  F--GTDRALSLWAPILLGMMSS 80


>ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310286|gb|EFH40710.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 395

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 43/82 (52%), Positives = 55/82 (67%), Gaps = 9/82 (10%)
 Frame = -3

Query: 612 MDENWSSRYWCHMCSQMVSPIMGIEIKCPYCDSGFVEEMQSRG---------NISDASTE 460
           M+E  +SRYWCHMCSQMV+PIM  EIKCP+C SGF+EEM             ++ D+ T+
Sbjct: 1   MEETMASRYWCHMCSQMVNPIMESEIKCPFCQSGFIEEMSGNSGGGGGRGIRDVQDSETD 60

Query: 459 LVSDRDRALSLWAPILFRLMNN 394
                DRALSLWAPIL  +M++
Sbjct: 61  F--GTDRALSLWAPILLGMMSS 80


>ref|XP_004149638.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
           gi|449519040|ref|XP_004166543.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 362

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 10/83 (12%)
 Frame = -3

Query: 612 MDENWSSRYWCHMCSQMVSPIMGIEIKCPYCDSGFVEEM--------QSRGNISDASTEL 457
           MDE  ++RYWCHMCSQMV+PI+ +EIKCP+C SGFVEE+            N ++ + EL
Sbjct: 1   MDELIATRYWCHMCSQMVNPIVDVEIKCPFCRSGFVEEIGNGISSDNNDNNNNNNNNNEL 60

Query: 456 VSD--RDRALSLWAPILFRLMNN 394
            SD   +RALSLWAPIL  +M N
Sbjct: 61  ESDFGSERALSLWAPILLGMMGN 83



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/54 (55%), Positives = 39/54 (72%)
 Frame = -1

Query: 164 RDGQRVILLNPFNQAIVLQGSMDGNQSNEHELRNNGIGASIGDYFIGSGLDVLL 3
           R+ +RVIL+NPFNQ IV+QG  + NQ+       N IG S+GDYF+G GLD+LL
Sbjct: 158 RERERVILINPFNQTIVVQGGENQNQN------QNSIG-SLGDYFVGPGLDLLL 204


>ref|XP_003552191.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 344

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 42/70 (60%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
 Frame = -3

Query: 597 SSRYWCHMCSQMVSPIMGIEIKCPYCDSGFVEEMQSRGNISDASTELVSD--RDRALSLW 424
           ++RYWCHMCSQMV+PIM +EI+CP+C SGFVEEM +  + S       SD   DRALSLW
Sbjct: 2   AARYWCHMCSQMVNPIMDMEIRCPFCQSGFVEEMGNTPSSSSIPNTSESDFESDRALSLW 61

Query: 423 APILFRLMNN 394
           APIL  +M N
Sbjct: 62  APILLGMMGN 71


>ref|XP_002303979.1| predicted protein [Populus trichocarpa] gi|222841411|gb|EEE78958.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
 Frame = -3

Query: 597 SSRYWCHMCSQMVSPIMGIEIKCPYCDSGFVEEM-QSRGNISDASTELVSDRDRALSLWA 421
           ++RYWCHMCSQMV+PIMG+EIKCP+C +GF+E+M  S G+     +E  S  DRALSLWA
Sbjct: 2   AARYWCHMCSQMVNPIMGVEIKCPFCQNGFIEDMIDSTGDNQVPDSEFGS--DRALSLWA 59

Query: 420 PILFRLMNNQY 388
           PIL  ++ N +
Sbjct: 60  PILLGMVGNSH 70



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = -1

Query: 164 RDGQRVILLNPFNQAIVLQGSMDGNQSNEHELRNNGIGASIGDYFIGSGLDVLL 3
           R+ +RVIL+NPFNQ+I++QGS D N  N      N IG S+GDY IG GLD+LL
Sbjct: 154 RERERVILINPFNQSIIVQGSYDSN--NVQNQNQNAIG-SLGDYVIGPGLDLLL 204