BLASTX nr result

ID: Dioscorea21_contig00019087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019087
         (1267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265544.2| PREDICTED: signal recognition particle recep...   377   e-102
ref|XP_004155361.1| PREDICTED: signal recognition particle recep...   358   2e-96
ref|XP_004135257.1| PREDICTED: signal recognition particle recep...   358   2e-96
gb|ACJ84671.1| unknown [Medicago truncatula]                          357   3e-96
gb|AFK36205.1| unknown [Lotus japonicus]                              357   4e-96

>ref|XP_002265544.2| PREDICTED: signal recognition particle receptor subunit beta-like
           [Vitis vinifera] gi|297739076|emb|CBI28565.3| unnamed
           protein product [Vitis vinifera]
          Length = 259

 Score =  377 bits (967), Expect = e-102
 Identities = 179/256 (69%), Positives = 212/256 (82%)
 Frame = +3

Query: 222 MEQWIQHFEEWAHQFEQWIHEQPKEQLYAAXXXXXXXXXXXXXYRILNRGQRNTIVLTGL 401
           +EQW    ++W+ Q  +W H+ P+ QLYAA              R+  R + NT+VLTGL
Sbjct: 4   LEQWRIQLQQWSRQGAEWFHQMPETQLYAAIAVVFVTTFFLLSIRLFKRTKSNTVVLTGL 63

Query: 402 SGGGKTILFYQLRDGTPHQGTVTSMEPNSGTFVLHSELEKKGKFKPIHLVDVPGHSRLRP 581
           SG GKT LFYQL+DG+ H GTVTSM+PN GTFVLHSE+ KKGK KP+H+VDVPGHSRLRP
Sbjct: 64  SGSGKTTLFYQLQDGSSHLGTVTSMDPNEGTFVLHSEIAKKGKIKPVHVVDVPGHSRLRP 123

Query: 582 ILDDFLAQAAGIIFVVDAVEFLPNCRAAAEYLYDILTKSTVVKRKVPVLILCNKTDKITA 761
            LD+FL QAAGI+FVVDA+EFLPNCRAA+EYLYDILTKS+VVK+K+PVLILCNKTDK+TA
Sbjct: 124 KLDEFLPQAAGIVFVVDALEFLPNCRAASEYLYDILTKSSVVKKKIPVLILCNKTDKVTA 183

Query: 762 HSKEFIRKQLEKEIDKLRTSRTAVSSADVTNEYTLGVPSEAFTFSQCHNKVAVADASGLT 941
           H+KEFIRKQLEKEI+K R SR+A+S+ADV NE+TLGVP EAF FSQCHNKV VADASGLT
Sbjct: 184 HTKEFIRKQLEKEIEKFRASRSAISAADVVNEFTLGVPGEAFGFSQCHNKVTVADASGLT 243

Query: 942 GEVSQVEQFIREQVKP 989
           GE+SQ+E+FIRE VKP
Sbjct: 244 GEISQLEEFIREYVKP 259


>ref|XP_004155361.1| PREDICTED: signal recognition particle receptor subunit beta-like
           [Cucumis sativus]
          Length = 266

 Score =  358 bits (919), Expect = 2e-96
 Identities = 175/263 (66%), Positives = 209/263 (79%), Gaps = 7/263 (2%)
 Frame = +3

Query: 219 GMEQWIQHFEEWAHQFEQW-------IHEQPKEQLYAAXXXXXXXXXXXXXYRILNRGQR 377
           G EQW    E+   Q EQW       +H+ P  QLY                R+  R + 
Sbjct: 3   GTEQWKVQVEQLKVQMEQWLEQGLQFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRRKS 62

Query: 378 NTIVLTGLSGGGKTILFYQLRDGTPHQGTVTSMEPNSGTFVLHSELEKKGKFKPIHLVDV 557
           NTIVL+GLSG GKTILFYQLRDG+ HQGTVTSMEPN GTFVLHSE+ KK K KP+HLVDV
Sbjct: 63  NTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDV 122

Query: 558 PGHSRLRPILDDFLAQAAGIIFVVDAVEFLPNCRAAAEYLYDILTKSTVVKRKVPVLILC 737
           PGHSRLR  LDDFL QAAG++FVVDA++FLPNCRAA+EYLYDILT ++VVK+K+PVLILC
Sbjct: 123 PGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILC 182

Query: 738 NKTDKITAHSKEFIRKQLEKEIDKLRTSRTAVSSADVTNEYTLGVPSEAFTFSQCHNKVA 917
           NKTDK+TAH+KEFI +Q+EKEIDKLR SR+A+S+AD+ N++TLG+P +AF+F+QCHNKVA
Sbjct: 183 NKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNKVA 242

Query: 918 VADASGLTGEVSQVEQFIREQVK 986
           VA+ASGLTGEVS+VEQFIRE VK
Sbjct: 243 VAEASGLTGEVSEVEQFIRENVK 265


>ref|XP_004135257.1| PREDICTED: signal recognition particle receptor subunit beta-like
           [Cucumis sativus]
          Length = 266

 Score =  358 bits (919), Expect = 2e-96
 Identities = 175/263 (66%), Positives = 209/263 (79%), Gaps = 7/263 (2%)
 Frame = +3

Query: 219 GMEQWIQHFEEWAHQFEQW-------IHEQPKEQLYAAXXXXXXXXXXXXXYRILNRGQR 377
           G EQW    E+   Q EQW       +H+ P  QLY                R+  R + 
Sbjct: 3   GTEQWKVQVEQLKVQMEQWLEQGLEFVHQIPPIQLYVGVGVLLFTTLLLLFTRLFKRRKS 62

Query: 378 NTIVLTGLSGGGKTILFYQLRDGTPHQGTVTSMEPNSGTFVLHSELEKKGKFKPIHLVDV 557
           NTIVL+GLSG GKTILFYQLRDG+ HQGTVTSMEPN GTFVLHSE+ KK K KP+HLVDV
Sbjct: 63  NTIVLSGLSGSGKTILFYQLRDGSSHQGTVTSMEPNEGTFVLHSEIAKKDKLKPVHLVDV 122

Query: 558 PGHSRLRPILDDFLAQAAGIIFVVDAVEFLPNCRAAAEYLYDILTKSTVVKRKVPVLILC 737
           PGHSRLR  LDDFL QAAG++FVVDA++FLPNCRAA+EYLYDILT ++VVK+K+PVLILC
Sbjct: 123 PGHSRLRAKLDDFLPQAAGVVFVVDALDFLPNCRAASEYLYDILTNASVVKKKIPVLILC 182

Query: 738 NKTDKITAHSKEFIRKQLEKEIDKLRTSRTAVSSADVTNEYTLGVPSEAFTFSQCHNKVA 917
           NKTDK+TAH+KEFI +Q+EKEIDKLR SR+A+S+AD+ N++TLG+P +AF+F+QCHNKVA
Sbjct: 183 NKTDKVTAHTKEFINRQMEKEIDKLRVSRSAISAADIANDFTLGIPGKAFSFTQCHNKVA 242

Query: 918 VADASGLTGEVSQVEQFIREQVK 986
           VA+ASGLTGEVS+VEQFIRE VK
Sbjct: 243 VAEASGLTGEVSEVEQFIRENVK 265


>gb|ACJ84671.1| unknown [Medicago truncatula]
          Length = 260

 Score =  357 bits (917), Expect = 3e-96
 Identities = 170/255 (66%), Positives = 207/255 (81%)
 Frame = +3

Query: 222 MEQWIQHFEEWAHQFEQWIHEQPKEQLYAAXXXXXXXXXXXXXYRILNRGQRNTIVLTGL 401
           +EQW + F    +    ++ + P  QLYAA              R+L R + NTIVLTGL
Sbjct: 5   LEQWKEQFSHLWNVANDYLRDVPPNQLYAAAAIAIFTTLLLLFLRVLKRTESNTIVLTGL 64

Query: 402 SGGGKTILFYQLRDGTPHQGTVTSMEPNSGTFVLHSELEKKGKFKPIHLVDVPGHSRLRP 581
           SG GKT+LFYQLRDG+ HQGTVTSMEPN GTF+LH E  KKGK KP+H+VDVPGHSRLRP
Sbjct: 65  SGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHGETAKKGKIKPVHIVDVPGHSRLRP 124

Query: 582 ILDDFLAQAAGIIFVVDAVEFLPNCRAAAEYLYDILTKSTVVKRKVPVLILCNKTDKITA 761
            LD+FL QAAGI+FVVDA++FLPNCRAA+EYLYD+LTK +VV++K+P+LILCNKTDK+TA
Sbjct: 125 KLDEFLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTDKVTA 184

Query: 762 HSKEFIRKQLEKEIDKLRTSRTAVSSADVTNEYTLGVPSEAFTFSQCHNKVAVADASGLT 941
           H+KEFIR+Q+EKEIDKLR+SR+AVS ADVTNE+TLGVP E F+F+QC NKV  ADASGLT
Sbjct: 185 HTKEFIRRQIEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTTADASGLT 244

Query: 942 GEVSQVEQFIREQVK 986
           GE+SQ+++FIRE VK
Sbjct: 245 GEISQLQEFIREYVK 259


>gb|AFK36205.1| unknown [Lotus japonicus]
          Length = 259

 Score =  357 bits (916), Expect = 4e-96
 Identities = 172/259 (66%), Positives = 207/259 (79%), Gaps = 7/259 (2%)
 Frame = +3

Query: 234 IQHFEEWAHQFEQ-------WIHEQPKEQLYAAXXXXXXXXXXXXXYRILNRGQRNTIVL 392
           +Q  E W  +  +       ++ + P EQLY A              R+  R + NT+VL
Sbjct: 1   MQELEHWKEELSRLWLTASDYLRQVPPEQLYIAAAIAVFTTLLLLSLRLFKRAKTNTVVL 60

Query: 393 TGLSGGGKTILFYQLRDGTPHQGTVTSMEPNSGTFVLHSELEKKGKFKPIHLVDVPGHSR 572
           TGL+G GKT+LFYQLRDG+ HQGTVTSMEPN GTF+LHSE  KKGK KP+H+VDVPGHSR
Sbjct: 61  TGLTGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHSETTKKGKVKPVHIVDVPGHSR 120

Query: 573 LRPILDDFLAQAAGIIFVVDAVEFLPNCRAAAEYLYDILTKSTVVKRKVPVLILCNKTDK 752
           LRP LD++L QAAG++FVVDAV+FLPNCRAA+EYLYDILTK +VVK+K+P+LILCNKTDK
Sbjct: 121 LRPKLDEYLPQAAGVVFVVDAVDFLPNCRAASEYLYDILTKGSVVKKKIPLLILCNKTDK 180

Query: 753 ITAHSKEFIRKQLEKEIDKLRTSRTAVSSADVTNEYTLGVPSEAFTFSQCHNKVAVADAS 932
           +TAH+KEFIR+QLEKEIDKLR SR+AVS ADVTNE+TLGVP EAF+F+QC NKV  ADAS
Sbjct: 181 VTAHTKEFIRRQLEKEIDKLRASRSAVSDADVTNEFTLGVPGEAFSFTQCCNKVTTADAS 240

Query: 933 GLTGEVSQVEQFIREQVKP 989
           GLTGE+SQ+E+FIRE VKP
Sbjct: 241 GLTGEISQLEEFIREYVKP 259


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