BLASTX nr result

ID: Dioscorea21_contig00019072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019072
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544737.1| PREDICTED: probable auxin efflux carrier com...   288   1e-75
ref|XP_002278449.2| PREDICTED: probable auxin efflux carrier com...   280   3e-73
emb|CBI19962.3| unnamed protein product [Vitis vinifera]              279   1e-72
ref|NP_001234199.1| auxin efflux facilitator SlPIN6 [Solanum lyc...   278   1e-72
gb|AAT48627.1| putative auxin efflux carrier protein 6 [Medicago...   274   3e-71

>ref|XP_003544737.1| PREDICTED: probable auxin efflux carrier component 6-like [Glycine
            max]
          Length = 531

 Score =  288 bits (738), Expect = 1e-75
 Identities = 157/252 (62%), Positives = 184/252 (73%), Gaps = 20/252 (7%)
 Frame = -1

Query: 1101 PRASNFNEMEAGTPALGKSPATVGT----PSPVVRVLLRE------------KEAGGEKE 970
            PRASNFNEMEA TP  G+SP + G      SPV RV+               K+   +KE
Sbjct: 280  PRASNFNEMEASTPVWGRSPVSAGRGCQQSSPVARVVWGSPGKCLGVERQGCKDIMSDKE 339

Query: 969  LSFRSTTKFM--AEEQD--GEHQEMPQPLVMLKLILTVVCRKLTRNPNTYXXXXXXXXXX 802
            +SFR +TK    A+ +D     Q+MP   VM++LIL VV RKL+RNPNTY          
Sbjct: 340  ISFRDSTKVSKPADPKDTVASSQKMPHAFVMMRLILVVVGRKLSRNPNTYSSVLGLLWSL 399

Query: 801  XSFKWQVSMPSLVMNSIKIISDAGLGMAMFSLGLFMALQPKIIACGARMACIGMVIRFIS 622
             SFKW + MPSL+  S+KIISDAGLGMAMFSLGLFMALQP+IIACG + A +GMVIRF+ 
Sbjct: 400  ISFKWNMEMPSLIKASVKIISDAGLGMAMFSLGLFMALQPRIIACGTKRAVMGMVIRFMC 459

Query: 621  GPMIMSAASIAVGLRGVHLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSL 442
            GP++MSA+SI++GLR   LHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGML+SL
Sbjct: 460  GPLVMSASSISIGLRQERLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLISL 519

Query: 441  PVTLLYYIFLGL 406
            P+TLLYYIFLGL
Sbjct: 520  PITLLYYIFLGL 531


>ref|XP_002278449.2| PREDICTED: probable auxin efflux carrier component 6-like [Vitis
            vinifera]
          Length = 532

 Score =  280 bits (717), Expect = 3e-73
 Identities = 160/246 (65%), Positives = 183/246 (74%), Gaps = 14/246 (5%)
 Frame = -1

Query: 1101 PRASNFNEMEAGTPALGKSPATVGTP---------SPVVRVLLREKEAGGEKELSFRSTT 949
            PRASNFNE++  T     +P  V +P         SP    +    E+ G KE+SFR ++
Sbjct: 288  PRASNFNELDTTTITTTNTPFWVRSPVAGKVYRQQSPAFSGVRMVWESPG-KEISFRDSS 346

Query: 948  KF-MAEEQDGEH----QEMPQPLVMLKLILTVVCRKLTRNPNTYXXXXXXXXXXXSFKWQ 784
            KF +AEE+D +     Q+MP+  VML+LILT+V RKL+RNPNTY           SFKW 
Sbjct: 347  KFPVAEEEDPKATATGQDMPRTHVMLRLILTMVGRKLSRNPNTYSSVLGLLWSLISFKWN 406

Query: 783  VSMPSLVMNSIKIISDAGLGMAMFSLGLFMALQPKIIACGARMACIGMVIRFISGPMIMS 604
            V MPSLV  SIKIISDAGLGMAMFSLGLFMALQP+IIACG + A +GM IRFI GP++MS
Sbjct: 407  VGMPSLVKYSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKRATMGMGIRFICGPILMS 466

Query: 603  AASIAVGLRGVHLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLY 424
            AASIAVGLRGV LH AIVQA+LPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLY
Sbjct: 467  AASIAVGLRGVRLHAAIVQASLPQGIVPFVFAREYGLHPDILSTGVIFGMLVSLPVTLLY 526

Query: 423  YIFLGL 406
            YI LGL
Sbjct: 527  YILLGL 532


>emb|CBI19962.3| unnamed protein product [Vitis vinifera]
          Length = 527

 Score =  279 bits (713), Expect = 1e-72
 Identities = 162/263 (61%), Positives = 187/263 (71%), Gaps = 31/263 (11%)
 Frame = -1

Query: 1101 PRASNFNEMEAGTPALGKSPATVGTP---------SPV---VRVLLRE------------ 994
            PRASNFNE++  T     +P  V +P         SP    VR++               
Sbjct: 265  PRASNFNELDTTTITTTNTPFWVRSPVAGKVYRQQSPAFSGVRMVWESPGKCNGGGGERQ 324

Query: 993  --KEAGGEKELSFRSTTKF-MAEEQDGEH----QEMPQPLVMLKLILTVVCRKLTRNPNT 835
              K+  GE+E+SFR ++KF +AEE+D +     Q+MP+  VML+LILT+V RKL+RNPNT
Sbjct: 325  GCKDVVGEREISFRDSSKFPVAEEEDPKATATGQDMPRTHVMLRLILTMVGRKLSRNPNT 384

Query: 834  YXXXXXXXXXXXSFKWQVSMPSLVMNSIKIISDAGLGMAMFSLGLFMALQPKIIACGARM 655
            Y           SFKW V MPSLV  SIKIISDAGLGMAMFSLGLFMALQP+IIACG + 
Sbjct: 385  YSSVLGLLWSLISFKWNVGMPSLVKYSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKR 444

Query: 654  ACIGMVIRFISGPMIMSAASIAVGLRGVHLHTAIVQAALPQGIVPFVFAREYGLHPDILS 475
            A +GM IRFI GP++MSAASIAVGLRGV LH AIVQA+LPQGIVPFVFAREYGLHPDILS
Sbjct: 445  ATMGMGIRFICGPILMSAASIAVGLRGVRLHAAIVQASLPQGIVPFVFAREYGLHPDILS 504

Query: 474  TGVIFGMLVSLPVTLLYYIFLGL 406
            TGVIFGMLVSLPVTLLYYI LGL
Sbjct: 505  TGVIFGMLVSLPVTLLYYILLGL 527


>ref|NP_001234199.1| auxin efflux facilitator SlPIN6 [Solanum lycopersicum]
            gi|327187149|gb|ADR30414.2| auxin efflux facilitator
            SlPIN6 [Solanum lycopersicum]
          Length = 538

 Score =  278 bits (712), Expect = 1e-72
 Identities = 158/260 (60%), Positives = 179/260 (68%), Gaps = 28/260 (10%)
 Frame = -1

Query: 1101 PRASNFNEMEAGTPALGKSPATVGTP---------SPVVRVLLRE----------KEAGG 979
            PRASNFNE++  T   G +P  V +P         SP  ++              ++  G
Sbjct: 281  PRASNFNELDVTTS--GNTPMWVMSPVGGKVFKQASPSSKMAWESSCLNGERQGYRDDVG 338

Query: 978  EKELSFRSTTKFMAEEQDGEH---------QEMPQPLVMLKLILTVVCRKLTRNPNTYXX 826
            EKE+SFR  + F  +E              QEMP  LVML+LI+ +V RKL+RNPNTY  
Sbjct: 339  EKEISFRDISNFPVQEVGAADSSNTNNIIKQEMPNALVMLRLIIVMVGRKLSRNPNTYSS 398

Query: 825  XXXXXXXXXSFKWQVSMPSLVMNSIKIISDAGLGMAMFSLGLFMALQPKIIACGARMACI 646
                     SFKW V MPSLV  SIKIISDAGLGMAMFSLGLFMALQP+IIACG +MA I
Sbjct: 399  ILGLLWSLISFKWNVGMPSLVKYSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKMAAI 458

Query: 645  GMVIRFISGPMIMSAASIAVGLRGVHLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGV 466
            GM IRFI GP++MSA SIAVGL+GV LHTAIVQAALPQGIVPFVFAREYGLHPDILSTGV
Sbjct: 459  GMAIRFIGGPLVMSATSIAVGLKGVRLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGV 518

Query: 465  IFGMLVSLPVTLLYYIFLGL 406
            IFGMLVSLPVTLLYY+ LGL
Sbjct: 519  IFGMLVSLPVTLLYYVLLGL 538


>gb|AAT48627.1| putative auxin efflux carrier protein 6 [Medicago truncatula]
          Length = 527

 Score =  274 bits (700), Expect = 3e-71
 Identities = 153/255 (60%), Positives = 176/255 (69%), Gaps = 23/255 (9%)
 Frame = -1

Query: 1101 PRASNFNEME---AGTPALGKSPATVGTPSPVVRVLLREKEA----GG---------EKE 970
            PRASNFNEME    GTP  G+SP   G       V+    E     GG         +KE
Sbjct: 273  PRASNFNEMEIVGGGTPVWGRSPVAGGRVLDGGMVVWESPEKWRGDGGHGCKDITMSDKE 332

Query: 969  LSFRSTTKFMA-------EEQDGEHQEMPQPLVMLKLILTVVCRKLTRNPNTYXXXXXXX 811
            +SFR + K          ++Q     +MP   VML+LIL V  RKL+RNPNTY       
Sbjct: 333  ISFRDSLKVSVAGEVVDPKDQIASSPKMPYAFVMLRLILIVAGRKLSRNPNTYSSLLGLL 392

Query: 810  XXXXSFKWQVSMPSLVMNSIKIISDAGLGMAMFSLGLFMALQPKIIACGARMACIGMVIR 631
                SFKW + MPSL+ +SIKIISDAGLGMAMFSLGLFMALQP+IIACG + A +GM IR
Sbjct: 393  WSLISFKWNIEMPSLIKSSIKIISDAGLGMAMFSLGLFMALQPRIIACGTKRAAMGMAIR 452

Query: 630  FISGPMIMSAASIAVGLRGVHLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGML 451
            F+ GP++MS +SIAVGLRG  LHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGML
Sbjct: 453  FLFGPLVMSLSSIAVGLRGKKLHTAIVQAALPQGIVPFVFAREYGLHPDILSTGVIFGML 512

Query: 450  VSLPVTLLYYIFLGL 406
            +SLP+TL+YYIFLGL
Sbjct: 513  ISLPITLIYYIFLGL 527


Top