BLASTX nr result

ID: Dioscorea21_contig00019054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019054
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273023.1| PREDICTED: tRNA-specific adenosine deaminase...   156   3e-36
ref|XP_004138511.1| PREDICTED: tRNA-specific adenosine deaminase...   155   5e-36
ref|XP_002511834.1| protein with unknown function [Ricinus commu...   151   1e-34
ref|XP_003521909.1| PREDICTED: tRNA-specific adenosine deaminase...   147   2e-33
ref|XP_003618981.1| Double-stranded RNA-specific adenosine deami...   144   9e-33

>ref|XP_002273023.1| PREDICTED: tRNA-specific adenosine deaminase 1 [Vitis vinifera]
           gi|297745247|emb|CBI40327.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score =  156 bits (394), Expect = 3e-36
 Identities = 91/192 (47%), Positives = 114/192 (59%), Gaps = 16/192 (8%)
 Frame = -2

Query: 604 NAAAKTRSSMASSAPYQWGEKVSSAVHSLYKALPKKGKPQGRETTVLAAFLLSSPIHDRT 425
           ++++   SS    +   WGE+VS  V S+YK+LPKKGKPQGRE TVLAAFL SSP  D  
Sbjct: 4   DSSSSPSSSSCLDSEKTWGEQVSEKVLSVYKSLPKKGKPQGREVTVLAAFLTSSPSQD-- 61

Query: 424 *ALTAPCTLSQS*ISPIFISDLEVVALGTGTKCIGGSLLSLSGDVVNDSHAEIIARRALL 245
                                LEVVALGTGTKCIG S LS  GD+VNDSHAE+IARRAL+
Sbjct: 62  ---------------------LEVVALGTGTKCIGRSRLSPHGDIVNDSHAEVIARRALM 100

Query: 244 RFFYSEILRI-------------DQKERNGEQKMAFLFDAE---QGKYVMNPGWRLHLYV 113
           RFFY+EI  +             +Q E +    M F  D++   Q K  M  GW+LHLY+
Sbjct: 101 RFFYTEIQSLLTISNRHTHNYGSEQLEGDDITNMLFHLDSDGPGQRKITMRAGWKLHLYI 160

Query: 112 TQIPCGVISMAL 77
           +Q+PCG  S++L
Sbjct: 161 SQLPCGDASLSL 172


>ref|XP_004138511.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Cucumis
           sativus] gi|449518611|ref|XP_004166330.1| PREDICTED:
           tRNA-specific adenosine deaminase 1-like [Cucumis
           sativus]
          Length = 406

 Score =  155 bits (392), Expect = 5e-36
 Identities = 93/181 (51%), Positives = 112/181 (61%), Gaps = 15/181 (8%)
 Frame = -2

Query: 568 SAPYQWGEKVSSAVHSLYKALPKKGKPQGRETTVLAAFLLSSPIHDRT*ALTAPCTLSQS 389
           S+P +WGE +S  V S+Y  LPKKGKPQGRE TVLAAFLLSSP                 
Sbjct: 6   SSPERWGETISEKVLSVYNTLPKKGKPQGREVTVLAAFLLSSP----------------- 48

Query: 388 *ISPIFISDLEVVALGTGTKCIGGSLLSLSGDVVNDSHAEIIARRALLRFFYSEILRIDQ 209
             SP    DLEVVALGTGTKC+G S LS +GDVVNDSHAE++ARRAL+RFFY++I    Q
Sbjct: 49  --SP---QDLEVVALGTGTKCLGRSQLSSNGDVVNDSHAEVVARRALMRFFYTQIYHQSQ 103

Query: 208 KERNGE----QKMA------FL--FDAEQG---KYVMNPGWRLHLYVTQIPCGVISMALS 74
                E    +KM       FL   D E G   KYVM   W+LHLY++Q+PCG  S + +
Sbjct: 104 SNSESEHHKTKKMRCDNVNNFLLQIDEEAGAERKYVMRKCWKLHLYISQLPCGDASSSAT 163

Query: 73  Q 71
           +
Sbjct: 164 R 164


>ref|XP_002511834.1| protein with unknown function [Ricinus communis]
           gi|223549014|gb|EEF50503.1| protein with unknown
           function [Ricinus communis]
          Length = 443

 Score =  151 bits (381), Expect = 1e-34
 Identities = 88/178 (49%), Positives = 113/178 (63%), Gaps = 12/178 (6%)
 Frame = -2

Query: 553 WGEKVSSAVHSLYKALPKKGKPQGRETTVLAAFLLSSPIHDRT*ALTAPCTLSQS*ISPI 374
           WGEKVS  V SLY +L KKGKPQGRE TVL++FL+SSP  +                   
Sbjct: 6   WGEKVSEKVISLYNSLQKKGKPQGREVTVLSSFLISSPSQE------------------- 46

Query: 373 FISDLEVVALGTGTKCIGGSLLSLSGDVVNDSHAEIIARRALLRFFYSEILRI-DQKERN 197
               LEV++LGTGTKC+G S LS  GD+VNDSHAEIIARRAL+RFFYSEI R+ D   ++
Sbjct: 47  ----LEVISLGTGTKCLGRSQLSPRGDIVNDSHAEIIARRALMRFFYSEIRRLTDTFNKH 102

Query: 196 GEQKMA------FLFDAEQG-----KYVMNPGWRLHLYVTQIPCGVISMALSQALHMQ 56
           G ++         LFD EQ      K+ +  GW+LHLY++Q+PCG  S++ S  L+M+
Sbjct: 103 GREQFQSDDVGNCLFDLEQDCSSQLKFKLRAGWQLHLYISQLPCGDASVS-SPLLYMR 159


>ref|XP_003521909.1| PREDICTED: tRNA-specific adenosine deaminase 1-like [Glycine max]
          Length = 407

 Score =  147 bits (370), Expect = 2e-33
 Identities = 83/181 (45%), Positives = 111/181 (61%), Gaps = 13/181 (7%)
 Frame = -2

Query: 583 SSMASSAPYQWGEKVSSAVHSLYKALPKKGKPQGRETTVLAAFLLSSPIHDRT*ALTAPC 404
           SS++SS    WG++VS  V S Y +LPKKGKPQGRE TVLA+FLLSSP +D         
Sbjct: 3   SSVSSSEESNWGKRVSEKVLSFYTSLPKKGKPQGREVTVLASFLLSSPSND--------- 53

Query: 403 TLSQS*ISPIFISDLEVVALGTGTKCIGGSLLSLSGDVVNDSHAEIIARRALLRFFYSEI 224
                         L+VVA+GTGTKC+G SLL   GDVV+DSHAE+IARRAL+RFFY++I
Sbjct: 54  --------------LKVVAMGTGTKCLGRSLLRTCGDVVHDSHAEVIARRALIRFFYTQI 99

Query: 223 LRIDQKER---NGEQKM-------AFLFD---AEQGKYVMNPGWRLHLYVTQIPCGVISM 83
             +   +    NG ++         F  D     +GKY +   W+LH+Y++Q+PCG  S+
Sbjct: 100 QHLTGSKHAPSNGGKRFKLDDGNSPFELDPGCLNKGKYSLKKDWKLHMYISQLPCGDASL 159

Query: 82  A 80
           +
Sbjct: 160 S 160


>ref|XP_003618981.1| Double-stranded RNA-specific adenosine deaminase [Medicago
           truncatula] gi|355493996|gb|AES75199.1| Double-stranded
           RNA-specific adenosine deaminase [Medicago truncatula]
          Length = 413

 Score =  144 bits (364), Expect = 9e-33
 Identities = 84/179 (46%), Positives = 109/179 (60%), Gaps = 15/179 (8%)
 Frame = -2

Query: 580 SMASSAPYQWGEKVSSAVHSLYKALPKKGKPQGRETTVLAAFLLSSPIHDRT*ALTAPCT 401
           SMASS      + VS  V SLY +LPKKGKPQGRE TVLAAFLLSSP ++          
Sbjct: 2   SMASSEGTCLDQSVSEKVISLYNSLPKKGKPQGREVTVLAAFLLSSPSNE---------- 51

Query: 400 LSQS*ISPIFISDLEVVALGTGTKCIGGSLLSLSGDVVNDSHAEIIARRALLRFFYSEIL 221
                        L+VVALGTGTKCIG S+L   GDVV+DSHAE+IARRAL+RFFY++I 
Sbjct: 52  -------------LKVVALGTGTKCIGRSMLRPYGDVVHDSHAEVIARRALIRFFYTQIQ 98

Query: 220 RIDQKE-----RNGEQKMA-----FLFDAEQG-----KYVMNPGWRLHLYVTQIPCGVI 89
           R+ +        NG ++         F+ ++G     KY +  GW+LH+Y++Q+PC +I
Sbjct: 99  RLSEPSSKSAPSNGAKRFKVDDNNLAFEVDEGCLDKRKYTLRSGWKLHMYISQLPCNLI 157


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