BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019019
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517574.1| DNA photolyase, putative [Ricinus communis] ...   149   3e-34
ref|XP_002304163.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
ref|NP_001030703.1| (6-4)DNA photolyase [Arabidopsis thaliana] g...   145   4e-33
ref|NP_566520.1| (6-4)DNA photolyase [Arabidopsis thaliana] gi|3...   145   4e-33
pdb|3FY4|A Chain A, (6-4) Photolyase Crystal Structure gi|228312...   145   4e-33

>ref|XP_002517574.1| DNA photolyase, putative [Ricinus communis]
           gi|223543206|gb|EEF44738.1| DNA photolyase, putative
           [Ricinus communis]
          Length = 537

 Score =  149 bits (375), Expect = 3e-34
 Identities = 64/75 (85%), Positives = 73/75 (97%)
 Frame = -3

Query: 230 LLSPYLKFGCLSSRYFYQCIQNVYKNVGKHTFPPVSLVGQLLWREFFYTVAFGTPNFDQM 51
           +LSPYLKFGCLSSRYFYQC+Q+VYKNVGKHT PPVSL+GQLLWR+FFYTVAFGTPNFDQM
Sbjct: 260 VLSPYLKFGCLSSRYFYQCLQDVYKNVGKHTSPPVSLLGQLLWRDFFYTVAFGTPNFDQM 319

Query: 50  KGNKICKQIPWNDNE 6
           K N+ICKQIPWN+++
Sbjct: 320 KENRICKQIPWNEDD 334


>ref|XP_002304163.1| predicted protein [Populus trichocarpa] gi|222841595|gb|EEE79142.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  147 bits (371), Expect = 9e-34
 Identities = 63/75 (84%), Positives = 72/75 (96%)
 Frame = -3

Query: 230 LLSPYLKFGCLSSRYFYQCIQNVYKNVGKHTFPPVSLVGQLLWREFFYTVAFGTPNFDQM 51
           +LSPYLKFGCLSSRYFYQC+Q+VYKNV KHT PPVSL GQLLWR+FFYTVAFGTPNFD+M
Sbjct: 259 VLSPYLKFGCLSSRYFYQCLQDVYKNVQKHTSPPVSLAGQLLWRDFFYTVAFGTPNFDRM 318

Query: 50  KGNKICKQIPWNDNE 6
           +GNK+CKQIPWND++
Sbjct: 319 EGNKLCKQIPWNDDD 333


>ref|NP_001030703.1| (6-4)DNA photolyase [Arabidopsis thaliana]
           gi|332642183|gb|AEE75704.1| (6-4)DNA photolyase
           [Arabidopsis thaliana]
          Length = 445

 Score =  145 bits (365), Expect = 4e-33
 Identities = 61/74 (82%), Positives = 71/74 (95%)
 Frame = -3

Query: 230 LLSPYLKFGCLSSRYFYQCIQNVYKNVGKHTFPPVSLVGQLLWREFFYTVAFGTPNFDQM 51
           ++SPYLKFGCLSSRYFYQC+QN+YK+V KHT PPVSL+GQLLWREFFYT AFGTPNFD+M
Sbjct: 278 VMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKM 337

Query: 50  KGNKICKQIPWNDN 9
           KGN+ICKQIPWN++
Sbjct: 338 KGNRICKQIPWNED 351


>ref|NP_566520.1| (6-4)DNA photolyase [Arabidopsis thaliana]
           gi|306756349|sp|O48652.2|UVR3_ARATH RecName:
           Full=(6-4)DNA photolyase; AltName: Full=Protein UV
           repair defective 3 gi|332642182|gb|AEE75703.1| (6-4)DNA
           photolyase [Arabidopsis thaliana]
          Length = 556

 Score =  145 bits (365), Expect = 4e-33
 Identities = 61/74 (82%), Positives = 71/74 (95%)
 Frame = -3

Query: 230 LLSPYLKFGCLSSRYFYQCIQNVYKNVGKHTFPPVSLVGQLLWREFFYTVAFGTPNFDQM 51
           ++SPYLKFGCLSSRYFYQC+QN+YK+V KHT PPVSL+GQLLWREFFYT AFGTPNFD+M
Sbjct: 278 VMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKM 337

Query: 50  KGNKICKQIPWNDN 9
           KGN+ICKQIPWN++
Sbjct: 338 KGNRICKQIPWNED 351


>pdb|3FY4|A Chain A, (6-4) Photolyase Crystal Structure gi|228312125|pdb|3FY4|B
           Chain B, (6-4) Photolyase Crystal Structure
           gi|228312126|pdb|3FY4|C Chain C, (6-4) Photolyase
           Crystal Structure gi|2804280|dbj|BAA24449.1| 6-4
           photolyase [Arabidopsis thaliana]
           gi|3929918|dbj|BAA34711.1| 6-4 photolyase [Arabidopsis
           thaliana] gi|11994334|dbj|BAB02293.1| 6-4 photolyase
           [Arabidopsis thaliana]
          Length = 537

 Score =  145 bits (365), Expect = 4e-33
 Identities = 61/74 (82%), Positives = 71/74 (95%)
 Frame = -3

Query: 230 LLSPYLKFGCLSSRYFYQCIQNVYKNVGKHTFPPVSLVGQLLWREFFYTVAFGTPNFDQM 51
           ++SPYLKFGCLSSRYFYQC+QN+YK+V KHT PPVSL+GQLLWREFFYT AFGTPNFD+M
Sbjct: 259 VMSPYLKFGCLSSRYFYQCLQNIYKDVKKHTSPPVSLLGQLLWREFFYTTAFGTPNFDKM 318

Query: 50  KGNKICKQIPWNDN 9
           KGN+ICKQIPWN++
Sbjct: 319 KGNRICKQIPWNED 332