BLASTX nr result

ID: Dioscorea21_contig00019013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019013
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA38057.1| TPA: hypothetical protein ZEAMMB73_563254, parti...    62   5e-08
ref|XP_002447724.1| hypothetical protein SORBIDRAFT_06g014590 [S...    61   8e-08
gb|AFW58112.1| hypothetical protein ZEAMMB73_120778 [Zea mays]         59   3e-07
sp|Q7F9I1.2|CLPC1_ORYSJ RecName: Full=Chaperone protein ClpC1, c...    58   7e-07
gb|EEC77204.1| hypothetical protein OsI_15716 [Oryza sativa Indi...    58   7e-07

>tpg|DAA38057.1| TPA: hypothetical protein ZEAMMB73_563254, partial [Zea mays]
          Length = 188

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
 Frame = +3

Query: 51  MAGTLIQSAIVPNAVVRSRSQLSGSGRTRRAAMMMCTVRSHPLTLHRFNGLRVSTPLGSR 230
           M GTL+QSA+VP     S  +     R R  A M+  + +  LTL  F GLR +  L +R
Sbjct: 1   MEGTLVQSAVVPTVYRSSSGRFRVRARARTNATMVRNMPTRTLTLGGFQGLRQTNFLDTR 60

Query: 231 S--QKDFHSVVAASILAPQRKASRGGVVAMF 317
           S  ++DF S+VA+ I  P+  ASRG V AMF
Sbjct: 61  SVIKRDFGSIVASQIARPRGSASRGVVRAMF 91


>ref|XP_002447724.1| hypothetical protein SORBIDRAFT_06g014590 [Sorghum bicolor]
           gi|241938907|gb|EES12052.1| hypothetical protein
           SORBIDRAFT_06g014590 [Sorghum bicolor]
          Length = 921

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
 Frame = +3

Query: 51  MAGTLIQSAIVPNAVVRSRSQLSGSGRTRRAAMMMCTVRSHPLTLHRFNGLRVSTPLGSR 230
           M G L+QSAIVP     S  +     R R  A M+  + +  LTL  F GLR +  L +R
Sbjct: 1   MEGALVQSAIVPTVYRSSSGRFRARARARTNATMVRNMPARTLTLGGFQGLRQTNFLDTR 60

Query: 231 S--QKDFHSVVAASILAPQRKASRGGVVAMF 317
           S  ++DF S+VA+ I  P+  ASRG V AMF
Sbjct: 61  SVIKRDFVSIVASQIARPRGSASRGVVRAMF 91


>gb|AFW58112.1| hypothetical protein ZEAMMB73_120778 [Zea mays]
          Length = 921

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 39/91 (42%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
 Frame = +3

Query: 51  MAGTLIQSAIVPNAVVRSRSQLSGSGRTRRAAMMMCTVRSHPLTLHRFNGLRVSTPLGSR 230
           M G L+QSAIVP     S  +     R R  A M+    +  LTL  F GLR +  L +R
Sbjct: 1   MEGALVQSAIVPAVYRSSSGRFRVRARARTNATMVRNTPTRTLTLGGFQGLRQTNFLDTR 60

Query: 231 S--QKDFHSVVAASILAPQRKASRGGVVAMF 317
           S  ++DF S+VA+ I  P+  ASRG V AMF
Sbjct: 61  SVIKRDFGSIVASQIARPRGSASRGVVRAMF 91


>sp|Q7F9I1.2|CLPC1_ORYSJ RecName: Full=Chaperone protein ClpC1, chloroplastic; AltName:
           Full=ATP-dependent Clp protease ATP-binding subunit ClpC
           homolog 1; AltName: Full=Casein lytic proteinase C1;
           Flags: Precursor
          Length = 918

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
 Frame = +3

Query: 51  MAGTLIQSAIVPNAVVRSRSQLSGSGRTRRAAMMMCTVRSHPLTLHRFNGLRVSTPLGSR 230
           M G+L+QSAI P    RS +      R R  A MM T+ +  LTL  F GLR +  L SR
Sbjct: 1   MEGSLVQSAIAPTIYRRSGT---ARFRVRARATMMRTMPTRTLTLGGFQGLRQTNFLDSR 57

Query: 231 S--QKDFHSVVAASILAPQRKASRGGVVAMF 317
           S  ++DF S+VA+ I  P+   SRG V AMF
Sbjct: 58  SVIKRDFGSIVASQISRPRGLGSRGVVRAMF 88


>gb|EEC77204.1| hypothetical protein OsI_15716 [Oryza sativa Indica Group]
          Length = 785

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 41/91 (45%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
 Frame = +3

Query: 51  MAGTLIQSAIVPNAVVRSRSQLSGSGRTRRAAMMMCTVRSHPLTLHRFNGLRVSTPLGSR 230
           M G+L+QSAI P    RS +      R R  A MM T+ +  LTL  F GLR +  L SR
Sbjct: 1   MEGSLVQSAIAPTIYRRSGT---ARFRVRARATMMRTMPTRTLTLGGFQGLRQTNFLDSR 57

Query: 231 S--QKDFHSVVAASILAPQRKASRGGVVAMF 317
           S  ++DF S+VA+ I  P+   SRG V AMF
Sbjct: 58  SVIKRDFGSIVASQISRPRGLGSRGVVRAMF 88


Top