BLASTX nr result

ID: Dioscorea21_contig00019009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00019009
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY61029.1| zinc finger-homeodomain protein 1 [Asparagus offi...   131   5e-29
gb|AFW60548.1| putative homeobox DNA-binding domain superfamily ...   119   2e-25
ref|XP_003576116.1| PREDICTED: ZF-HD homeobox protein At5g65410-...   119   3e-25
gb|AFW60545.1| putative homeobox DNA-binding domain superfamily ...   117   1e-24
gb|ABY61027.1| zinc finger-homeodomain protein 1 [Acorus america...   113   1e-23

>gb|ABY61029.1| zinc finger-homeodomain protein 1 [Asparagus officinalis]
          Length = 274

 Score =  131 bits (330), Expect = 5e-29
 Identities = 86/182 (47%), Positives = 99/182 (54%), Gaps = 30/182 (16%)
 Frame = -1

Query: 483 MDLSGHEGVEMAIPISS-TYTVXXXXXXXXQALSQGLI-------NGPHPPSEEQHQHNQ 328
           MDLS HEG ++ IPISS TY           + S G         + P PP  E H H  
Sbjct: 1   MDLSSHEG-DIPIPISSSTYIGAQSHGHSFLSSSNGPPPHHHHHHHPPPPPPTEDHHHQA 59

Query: 327 KKXXXXXXXXXXSWVKYKECLKNHAASIGGNATDGCGEFMPSGEEGTIESFKCSACNCHR 148
                       + VKY+ECLKNHAASIGGNATDGCGEFMPSGEEGT+E+ KCSAC CHR
Sbjct: 60  -----IVPKKPAAVVKYRECLKNHAASIGGNATDGCGEFMPSGEEGTLEALKCSACGCHR 114

Query: 147 NFHRKET-----------DVAETY--------SLVPRSAGGAQMVMPLG---SFHTSESD 34
           NFHRKET           D    +         L+PR    + M+MPLG   +  TSESD
Sbjct: 115 NFHRKETEGDPFGGNPSCDCRRNFIGGHGHKGVLIPRPTPHS-MIMPLGAASAMQTSESD 173

Query: 33  EM 28
           EM
Sbjct: 174 EM 175


>gb|AFW60548.1| putative homeobox DNA-binding domain superfamily protein [Zea mays]
          Length = 420

 Score =  119 bits (299), Expect = 2e-25
 Identities = 67/136 (49%), Positives = 80/136 (58%), Gaps = 15/136 (11%)
 Frame = -1

Query: 486 GMDLSGHEGVEMAIP----ISSTYTVXXXXXXXXQALSQGLING--------PHPPSEEQ 343
           GMDLSG +G E+AIP    ++S Y               G  NG        P P + E+
Sbjct: 38  GMDLSGTQG-ELAIPMHANVASPYGAGVGGHVLQLHRDHGSNNGQSPAPPLPPPPAAAEE 96

Query: 342 HQHNQKKXXXXXXXXXXSW---VKYKECLKNHAASIGGNATDGCGEFMPSGEEGTIESFK 172
            + + KK               VKY+ECLKNHAA+IGGNATDGCGEFMPSGEEG++E+ K
Sbjct: 97  TESSAKKRGPAAGAGGGGGSSTVKYRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALK 156

Query: 171 CSACNCHRNFHRKETD 124
           CSAC CHRNFHRKE D
Sbjct: 157 CSACGCHRNFHRKEVD 172


>ref|XP_003576116.1| PREDICTED: ZF-HD homeobox protein At5g65410-like [Brachypodium
           distachyon]
          Length = 378

 Score =  119 bits (297), Expect = 3e-25
 Identities = 63/123 (51%), Positives = 75/123 (60%), Gaps = 37/123 (30%)
 Frame = -1

Query: 285 VKYKECLKNHAASIGGNATDGCGEFMPSGEEGTIESFKCSACNCHRNFHRKETD------ 124
           VKY+ECLKNHAA+IGGNATDGCGEFMPSGEEG++E+FKCSAC CHRNFHRK+ D      
Sbjct: 115 VKYRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEAFKCSACGCHRNFHRKDFDDDLALH 174

Query: 123 ---VAETYSLVPRS--------------AGGA--------------QMVMPLGSFHTSES 37
              +   + L+PR                GGA              Q+VMPL   H+SES
Sbjct: 175 RRLLLGPHHLIPRGPIVPSSGAGDHYGVGGGAAYARAALPPPQHPHQIVMPLNMIHSSES 234

Query: 36  DEM 28
           DE+
Sbjct: 235 DEI 237


>gb|AFW60545.1| putative homeobox DNA-binding domain superfamily protein isoform 1
           [Zea mays] gi|413920614|gb|AFW60546.1| putative homeobox
           DNA-binding domain superfamily protein isoform 2 [Zea
           mays] gi|413920615|gb|AFW60547.1| putative homeobox
           DNA-binding domain superfamily protein isoform 3 [Zea
           mays]
          Length = 382

 Score =  117 bits (293), Expect = 1e-24
 Identities = 66/135 (48%), Positives = 79/135 (58%), Gaps = 15/135 (11%)
 Frame = -1

Query: 483 MDLSGHEGVEMAIP----ISSTYTVXXXXXXXXQALSQGLING--------PHPPSEEQH 340
           MDLSG +G E+AIP    ++S Y               G  NG        P P + E+ 
Sbjct: 1   MDLSGTQG-ELAIPMHANVASPYGAGVGGHVLQLHRDHGSNNGQSPAPPLPPPPAAAEET 59

Query: 339 QHNQKKXXXXXXXXXXSW---VKYKECLKNHAASIGGNATDGCGEFMPSGEEGTIESFKC 169
           + + KK               VKY+ECLKNHAA+IGGNATDGCGEFMPSGEEG++E+ KC
Sbjct: 60  ESSAKKRGPAAGAGGGGGSSTVKYRECLKNHAAAIGGNATDGCGEFMPSGEEGSLEALKC 119

Query: 168 SACNCHRNFHRKETD 124
           SAC CHRNFHRKE D
Sbjct: 120 SACGCHRNFHRKEVD 134


>gb|ABY61027.1| zinc finger-homeodomain protein 1 [Acorus americanus]
          Length = 266

 Score =  113 bits (283), Expect = 1e-23
 Identities = 69/177 (38%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
 Frame = -1

Query: 483 MDLSGHEGVEMAIPISSTYTVXXXXXXXXQALSQGLINGPHPPSE-------------EQ 343
           MDL  HE   + IPIS+T+                +I+GP PP                 
Sbjct: 1   MDLPNHES-GLPIPISTTF---------GGGNHPHIIHGPPPPPPPLPPPTLLDIDPYNT 50

Query: 342 HQHNQKKXXXXXXXXXXSWVKYKECLKNHAASIGGNATDGCGEFMPSGEEGTIESFKCSA 163
             +N  K            VKY+ECLKNHAA++GGNATDGCGEFMPSGEEGT+++  CSA
Sbjct: 51  TTNNNNKVS----------VKYRECLKNHAAAMGGNATDGCGEFMPSGEEGTMDALICSA 100

Query: 162 CNCHRNFHRKETDVAET----YSLVPRSAGGAQMVMPLGSFHTSESDEMDRQQQHHH 4
           C CHRNFHRK+ + + +    Y L+P      ++V   G    S+       Q HHH
Sbjct: 101 CTCHRNFHRKDFEGSSSADPPYLLLPSPLKSRKVVGQKGVLIASDPLRYSHHQHHHH 157


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