BLASTX nr result

ID: Dioscorea21_contig00018499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018499
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297671.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              107   1e-21
emb|CBI16443.3| unnamed protein product [Vitis vinifera]              107   1e-21

>ref|XP_002297671.1| predicted protein [Populus trichocarpa]
           gi|224057539|ref|XP_002299257.1| predicted protein
           [Populus trichocarpa] gi|222844929|gb|EEE82476.1|
           predicted protein [Populus trichocarpa]
           gi|222846515|gb|EEE84062.1| predicted protein [Populus
           trichocarpa]
          Length = 291

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/78 (70%), Positives = 66/78 (84%), Gaps = 1/78 (1%)
 Frame = +1

Query: 4   EATNNFNEEIGRGSFGIVYKGVLRR-ETANINVAVKKLDRLSKDAEKEFMAEVRSIGQTH 180
           +ATN FNEE+GRGSFGIVYKGV+    T  I++AVKKLDRL KD ++EF  EV+ IGQTH
Sbjct: 16  DATNGFNEELGRGSFGIVYKGVIETGSTVPISIAVKKLDRLVKDGDEEFKTEVKVIGQTH 75

Query: 181 HKNLVRLIGFCNEGENRL 234
           HKNLVRL+G+CNEG+NRL
Sbjct: 76  HKNLVRLLGYCNEGQNRL 93


>ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|222869874|gb|EEF07005.1|
           predicted protein [Populus trichocarpa]
          Length = 691

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/77 (63%), Positives = 64/77 (83%)
 Frame = +1

Query: 4   EATNNFNEEIGRGSFGIVYKGVLRRETANINVAVKKLDRLSKDAEKEFMAEVRSIGQTHH 183
           EATN+F +E+GRG FG+VYKG ++  +  + VAVKKLD++ +D EKEF  EV+ IGQTHH
Sbjct: 399 EATNDFKDEVGRGGFGVVYKGTIQAGSTRV-VAVKKLDKVVQDGEKEFKTEVQVIGQTHH 457

Query: 184 KNLVRLIGFCNEGENRL 234
           KNLVRL+GFC+EG+NRL
Sbjct: 458 KNLVRLLGFCDEGQNRL 474


>ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|222841463|gb|EEE79010.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/77 (63%), Positives = 64/77 (83%)
 Frame = +1

Query: 4   EATNNFNEEIGRGSFGIVYKGVLRRETANINVAVKKLDRLSKDAEKEFMAEVRSIGQTHH 183
           EATN+F +E+GRG FG+VYKG ++  +  + VAVKKLD++ +D EKEF  EV+ IGQTHH
Sbjct: 403 EATNDFKDEVGRGGFGVVYKGTIQAGSTRV-VAVKKLDKVVQDGEKEFKTEVQVIGQTHH 461

Query: 184 KNLVRLIGFCNEGENRL 234
           KNLVRL+GFC+EG+NRL
Sbjct: 462 KNLVRLLGFCDEGQNRL 478


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/77 (63%), Positives = 64/77 (83%)
 Frame = +1

Query: 4   EATNNFNEEIGRGSFGIVYKGVLRRETANINVAVKKLDRLSKDAEKEFMAEVRSIGQTHH 183
           EATN+F +E+GRG FG+VYKG ++  +  + VAVKKLD++ +D EKEF  EV+ IGQTHH
Sbjct: 546 EATNDFKDEVGRGGFGVVYKGTIQAGSTRV-VAVKKLDKVVQDGEKEFKTEVQVIGQTHH 604

Query: 184 KNLVRLIGFCNEGENRL 234
           KNLVRL+GFC+EG+NRL
Sbjct: 605 KNLVRLLGFCDEGQNRL 621


>emb|CBI16443.3| unnamed protein product [Vitis vinifera]
          Length = 1367

 Score =  107 bits (266), Expect = 1e-21
 Identities = 49/77 (63%), Positives = 64/77 (83%)
 Frame = +1

Query: 4   EATNNFNEEIGRGSFGIVYKGVLRRETANINVAVKKLDRLSKDAEKEFMAEVRSIGQTHH 183
           EATN F +++GRG+FG VYKGVL  E  N N AVKKLD++ K+ E+EF  EV++IG+T+H
Sbjct: 557 EATNGFKDQLGRGAFGTVYKGVLNHENGNFN-AVKKLDKMVKEGEQEFETEVKAIGRTNH 615

Query: 184 KNLVRLIGFCNEGENRL 234
           KNLV+L+GFCNEG+NRL
Sbjct: 616 KNLVQLLGFCNEGQNRL 632



 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/77 (58%), Positives = 61/77 (79%)
 Frame = +1

Query: 4    EATNNFNEEIGRGSFGIVYKGVLRRETANINVAVKKLDRLSKDAEKEFMAEVRSIGQTHH 183
            EAT+ F EE+GRG+F  VYKGVL  E   + VAVKK +++ ++ E+EF  EV++IGQT+H
Sbjct: 1075 EATDGFKEELGRGAFATVYKGVLAYEKGKL-VAVKKFEKMMRENEQEFQTEVKAIGQTNH 1133

Query: 184  KNLVRLIGFCNEGENRL 234
            KNLV+L+GFC EGE+RL
Sbjct: 1134 KNLVQLLGFCKEGEHRL 1150


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