BLASTX nr result

ID: Dioscorea21_contig00018462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018462
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF95033.1| FAR1 family protein, expressed [Oryza sativa Japo...    87   1e-14
ref|NP_001049594.1| Os03g0255400 [Oryza sativa Japonica Group] g...    87   1e-14
gb|EEC74889.1| hypothetical protein OsI_10802 [Oryza sativa Indi...    85   4e-14
tpg|DAA44445.1| TPA: hypothetical protein ZEAMMB73_228015 [Zea m...    71   4e-10
ref|XP_002468163.1| hypothetical protein SORBIDRAFT_01g040730 [S...    69   2e-09

>gb|ABF95033.1| FAR1 family protein, expressed [Oryza sativa Japonica Group]
          Length = 520

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
 Frame = +3

Query: 3   SKNLVHLQSDISTRKSLALPEASAVCTRVDTGGC-TEMQSIPRDSITVLYNQLHYEALRY 179
           S   V + S+ S+R+ +     S     V   GC T +Q    DS+TVLYN L  EA+++
Sbjct: 301 SSRAVPITSNDSSREVIDFAATSNDPNEVKAEGCSTGIQCNSTDSLTVLYNHLCQEAIKF 360

Query: 180 AQEGAVSDEIYNVAMTALKEAVEKVATAKRSAVTATQASHHKVDTMELDPAQSISQVNES 359
           A+EG+V++EIY+VAM ALKEA EKV+  KRS  T +Q S H+V  ME   A   S  ++ 
Sbjct: 361 AKEGSVTEEIYHVAMNALKEAAEKVSEVKRSHPTMSQ-SKHEVMQMETMSASQCSNDDKQ 419

Query: 360 KTIHPGLS-----ETEVVAIPA-LPTALCMAAKGSVPATC 461
           KT+ P L         +V IP  L T        ++P +C
Sbjct: 420 KTMTPQLKFLQEPSPSLVLIPTNLLTHSSSNCADNIPLSC 459


>ref|NP_001049594.1| Os03g0255400 [Oryza sativa Japonica Group]
           gi|108707237|gb|ABF95032.1| FAR1 family protein,
           expressed [Oryza sativa Japonica Group]
           gi|113548065|dbj|BAF11508.1| Os03g0255400 [Oryza sativa
           Japonica Group] gi|215694872|dbj|BAG90063.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222624585|gb|EEE58717.1| hypothetical protein
           OsJ_10174 [Oryza sativa Japonica Group]
          Length = 698

 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 62/160 (38%), Positives = 87/160 (54%), Gaps = 7/160 (4%)
 Frame = +3

Query: 3   SKNLVHLQSDISTRKSLALPEASAVCTRVDTGGC-TEMQSIPRDSITVLYNQLHYEALRY 179
           S   V + S+ S+R+ +     S     V   GC T +Q    DS+TVLYN L  EA+++
Sbjct: 301 SSRAVPITSNDSSREVIDFAATSNDPNEVKAEGCSTGIQCNSTDSLTVLYNHLCQEAIKF 360

Query: 180 AQEGAVSDEIYNVAMTALKEAVEKVATAKRSAVTATQASHHKVDTMELDPAQSISQVNES 359
           A+EG+V++EIY+VAM ALKEA EKV+  KRS  T +Q S H+V  ME   A   S  ++ 
Sbjct: 361 AKEGSVTEEIYHVAMNALKEAAEKVSEVKRSHPTMSQ-SKHEVMQMETMSASQCSNDDKQ 419

Query: 360 KTIHPGLS-----ETEVVAIPA-LPTALCMAAKGSVPATC 461
           KT+ P L         +V IP  L T        ++P +C
Sbjct: 420 KTMTPQLKFLQEPSPSLVLIPTNLLTHSSSNCADNIPLSC 459



 Score = 57.4 bits (137), Expect(2) = 1e-06
 Identities = 39/107 (36%), Positives = 50/107 (46%), Gaps = 17/107 (15%)
 Frame = +2

Query: 521 PLKSPCTLVTTPIGSSPDSAYNAAAFTQSIAPHQPEPAIHSGARSLATSSGNISGSNPQ- 697
           PL     ++  P G S D  Y   A     AP +  P  +  A  +    G+   S P  
Sbjct: 511 PLTLYMPIMKNPTGDSADGQYRLLA-----APIEAVPISYRPAEPIQQPHGSFPNSGPLP 565

Query: 698 ----------------VHATALAVGARILPPKAAASLIKAVESRIRS 790
                           VHATALA GAR++PP+ AASLIKA+ES+IRS
Sbjct: 566 GFLPKLYKRGKGPNSLVHATALACGARVVPPEEAASLIKAIESKIRS 612



 Score = 21.9 bits (45), Expect(2) = 1e-06
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 378 LSETEVVAIPALPTALCM 431
           LS+   VAIPA+P  L M
Sbjct: 499 LSKETTVAIPAIPLTLYM 516


>gb|EEC74889.1| hypothetical protein OsI_10802 [Oryza sativa Indica Group]
          Length = 698

 Score = 84.7 bits (208), Expect = 4e-14
 Identities = 62/160 (38%), Positives = 86/160 (53%), Gaps = 7/160 (4%)
 Frame = +3

Query: 3   SKNLVHLQSDISTRKSLALPEASAVCTRVDTGGC-TEMQSIPRDSITVLYNQLHYEALRY 179
           S   V + S+ S+R+ +     S     V   GC T +Q    DS TVLYN L  EA+++
Sbjct: 301 SSRAVPITSNDSSREVIDFAATSNDPNEVKAEGCSTGIQCNSTDSPTVLYNHLCQEAIKF 360

Query: 180 AQEGAVSDEIYNVAMTALKEAVEKVATAKRSAVTATQASHHKVDTMELDPAQSISQVNES 359
           A+EG+V++EIY+VAM ALKEA EKV+  KRS  T +Q S H+V  ME   A   S  ++ 
Sbjct: 361 AKEGSVTEEIYHVAMNALKEAAEKVSEVKRSHPTMSQ-SKHEVMQMETMSASQCSNDDKQ 419

Query: 360 KTIHPGLS-----ETEVVAIPA-LPTALCMAAKGSVPATC 461
           KT+ P L         +V IP  L T        ++P +C
Sbjct: 420 KTMTPQLKFLQEPSPSLVLIPTNLLTHSSSNCADNIPLSC 459



 Score = 57.4 bits (137), Expect(2) = 1e-06
 Identities = 39/107 (36%), Positives = 50/107 (46%), Gaps = 17/107 (15%)
 Frame = +2

Query: 521 PLKSPCTLVTTPIGSSPDSAYNAAAFTQSIAPHQPEPAIHSGARSLATSSGNISGSNPQ- 697
           PL     ++  P G S D  Y   A     AP +  P  +  A  +    G+   S P  
Sbjct: 511 PLTLYMPIMKNPTGDSADGQYRLLA-----APIEAVPISYRPAEPIQQPHGSFPNSGPLP 565

Query: 698 ----------------VHATALAVGARILPPKAAASLIKAVESRIRS 790
                           VHATALA GAR++PP+ AASLIKA+ES+IRS
Sbjct: 566 GFLPKLYKRGKGPNSLVHATALACGARVVPPEEAASLIKAIESKIRS 612



 Score = 21.9 bits (45), Expect(2) = 1e-06
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 378 LSETEVVAIPALPTALCM 431
           LS+   VAIPA+P  L M
Sbjct: 499 LSKETTVAIPAIPLTLYM 516


>tpg|DAA44445.1| TPA: hypothetical protein ZEAMMB73_228015 [Zea mays]
          Length = 666

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 6/90 (6%)
 Frame = +3

Query: 114 QSIPRDSITVLYNQLHYEALRYAQEGAVSDEIYNVAMTALKEAVEKVATAKRSAVTAT-- 287
           Q  P DS+T+LYN L  EA+++A+EG+V++EIY+VA++ALKEA EKVA  KRS  T +  
Sbjct: 336 QCNPADSLTILYNNLCQEAIKFAKEGSVTEEIYHVAVSALKEAAEKVAEVKRSRPTLSHC 395

Query: 288 ----QASHHKVDTMELDPAQSISQVNESKT 365
               ++ H  +    +   Q  +QV  ++T
Sbjct: 396 GFVRESKHDVLQEKSMSALQCSNQVELTRT 425



 Score = 48.1 bits (113), Expect(2) = 1e-06
 Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
 Frame = +2

Query: 506 VTESSPLKS---PCTLVTTPIGSSPDSAYNAAAFTQSIAPHQPEPAIHSGARSLATSSGN 676
           VT+S P  S   P  L+  PI + P S            P +P      G  +L    G 
Sbjct: 532 VTQSLPGSSTEGPYRLLAAPIEAVPIS----------YCPAEPIRQTQKGICALGPFGGV 581

Query: 677 IS-----GSNPQ--VHATALAVGARILPPKAAASLIKAVESRIRS 790
           +S     G+ P+  VHATALA GAR +P + AASLI A+ES+IRS
Sbjct: 582 LSELKNQGTVPKSIVHATALACGARAVPLEDAASLISAIESKIRS 626



 Score = 31.6 bits (70), Expect(2) = 1e-06
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = +3

Query: 375 GLSETEVVAIPALPTALCMAAKGSVPAT 458
           G S+  +VAIPA+P ALCM    S+P +
Sbjct: 512 GSSKDTMVAIPAIPLALCMPVTQSLPGS 539


>ref|XP_002468163.1| hypothetical protein SORBIDRAFT_01g040730 [Sorghum bicolor]
           gi|241922017|gb|EER95161.1| hypothetical protein
           SORBIDRAFT_01g040730 [Sorghum bicolor]
          Length = 663

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
 Frame = +3

Query: 129 DSITVLYNQLHYEALRYAQEGAVSDEIYNVAMTALKEAVEKVATAKRSAVTATQA---SH 299
           DS+TVLYN L  EA+++A+EG+V++EIY+VA++ALKEA EKVA  KRS  T       S 
Sbjct: 307 DSLTVLYNNLCQEAIKFAKEGSVTEEIYHVAVSALKEAAEKVAEVKRSRPTLPHCGFISE 366

Query: 300 HKVDTMELDPAQSISQVNE 356
            K D ++L    ++   N+
Sbjct: 367 SKHDVLQLKTTSALQCSNQ 385



 Score = 50.8 bits (120), Expect(2) = 6e-08
 Identities = 38/98 (38%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
 Frame = +2

Query: 506 VTESSPLKS---PCTLVTTPIGSSPDSAYNAAAFTQSIAPHQPEPAIHSGARSLATSSGN 676
           VT++ P  S   P  L+  PI + P S   A    Q   P +   A+      L+  + +
Sbjct: 500 VTQNLPGSSAEVPYRLLAAPIQAVPISYCPAEPIRQ---PQKGICALSPFGGVLSELNNH 556

Query: 677 ISGSNPQVHATALAVGARILPPKAAASLIKAVESRIRS 790
            +G    VHATALA GAR++P + AASLI A+ES+IRS
Sbjct: 557 GTGPKSLVHATALACGARVVPLEEAASLINAIESKIRS 594



 Score = 33.1 bits (74), Expect(2) = 6e-08
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +3

Query: 354 ESKTIHPGLSETEVVAIPALPTALCMAAKGSVPAT 458
           + + IH G SE  +VAIPA+P ALCM    ++P +
Sbjct: 474 KEQVIH-GSSEDSMVAIPAIPLALCMPVTQNLPGS 507


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