BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018460
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]                 215   3e-54
gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...   213   1e-53
gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]     212   3e-53
gb|ABV72583.1| unknown [Oryza sativa Japonica Group]                  208   3e-52
gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]     202   3e-50

>emb|CCI55315.1| PH01B001I13.11 [Phyllostachys edulis]
          Length = 1385

 Score =  215 bits (548), Expect = 3e-54
 Identities = 105/158 (66%), Positives = 123/158 (77%)
 Frame = +1

Query: 1    SHTYSLRDRSTLHPPVRYASASTSVSDVFEPGTYRTAVRLPEWRTAMAEELDALTRTHTW 180
            S  Y+LRDR +L PP R+A A  +     EP +YR AV  PEW+ AMAEE+ AL RT TW
Sbjct: 853  SPRYALRDRQSLRPPARFAFAGAATR---EPVSYRDAVTHPEWQHAMAEEIAALERTGTW 909

Query: 181  DLVPLPSHAVPITCRWIYRVKTRSDGSLERYKARLVARGFQQEYGRDYEETFAPVAHMHT 360
            DLVP PSH+ PI C+W+Y++KTRSDGSLERYKARLVARGFQQE+GRDY+ETFAPVAHM T
Sbjct: 910  DLVPFPSHSRPIMCKWVYKIKTRSDGSLERYKARLVARGFQQEHGRDYDETFAPVAHMTT 969

Query: 361  VRTLXXXXXXRGWVLHQLDVKNAFLHGDLKEEVYMTPP 474
            VRTL      R W + QLDVKNAFL+G+L+EEVYM PP
Sbjct: 970  VRTLLSVASVRHWSVSQLDVKNAFLNGELREEVYMHPP 1007


>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group] gi|78708691|gb|ABB47666.1|
            retrotransposon protein, putative, unclassified,
            expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score =  213 bits (542), Expect = 1e-53
 Identities = 103/155 (66%), Positives = 119/155 (76%)
 Frame = +1

Query: 10   YSLRDRSTLHPPVRYASASTSVSDVFEPGTYRTAVRLPEWRTAMAEELDALTRTHTWDLV 189
            Y+LR R  L  P R       V  VFEP TY+ A+ LP W+ AM+EEL AL RT+TWD+V
Sbjct: 735  YNLRARDALRAPNR---DDFVVGVVFEPSTYQEAIVLPHWKLAMSEELAALERTNTWDVV 791

Query: 190  PLPSHAVPITCRWIYRVKTRSDGSLERYKARLVARGFQQEYGRDYEETFAPVAHMHTVRT 369
            PLPSHAVPITC+W+Y+VKT+SDG +ERYKARLVARGFQQ +GRDY+ETFAPVAHM TVRT
Sbjct: 792  PLPSHAVPITCKWVYKVKTKSDGQVERYKARLVARGFQQAHGRDYDETFAPVAHMTTVRT 851

Query: 370  LXXXXXXRGWVLHQLDVKNAFLHGDLKEEVYMTPP 474
            L      R W + Q+DVKNAFLHGDL EEVYM PP
Sbjct: 852  LIAVAATRSWTISQMDVKNAFLHGDLHEEVYMHPP 886


>gb|AAT58770.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1419

 Score =  212 bits (539), Expect = 3e-53
 Identities = 103/155 (66%), Positives = 120/155 (77%)
 Frame = +1

Query: 10   YSLRDRSTLHPPVRYASASTSVSDVFEPGTYRTAVRLPEWRTAMAEELDALTRTHTWDLV 189
            Y LRDRS + P  RY+ A      V EP TY+ AV + EW+ AM EEL AL  T TWD+V
Sbjct: 887  YGLRDRSKIMPHPRYSCAIAD--GVQEPRTYQEAVTINEWKLAMNEELSALEHTGTWDVV 944

Query: 190  PLPSHAVPITCRWIYRVKTRSDGSLERYKARLVARGFQQEYGRDYEETFAPVAHMHTVRT 369
            PLP HAVPITC+W+++VKTRS+GS+ERYKARLVARGFQQEYGRDY+ETFAPVAH+ TVRT
Sbjct: 945  PLPHHAVPITCKWVFKVKTRSNGSIERYKARLVARGFQQEYGRDYDETFAPVAHITTVRT 1004

Query: 370  LXXXXXXRGWVLHQLDVKNAFLHGDLKEEVYMTPP 474
            L      R W + Q+DVKNAFLHGDL+EEVYM PP
Sbjct: 1005 LIAVAATRQWEISQMDVKNAFLHGDLQEEVYMQPP 1039


>gb|ABV72583.1| unknown [Oryza sativa Japonica Group]
          Length = 392

 Score =  208 bits (530), Expect = 3e-52
 Identities = 96/134 (71%), Positives = 111/134 (82%)
 Frame = +1

Query: 73  VSDVFEPGTYRTAVRLPEWRTAMAEELDALTRTHTWDLVPLPSHAVPITCRWIYRVKTRS 252
           V  VFEP TY+ A+ LP W+ AM+EEL AL RT+TWD+VPLPSHAVPITC+W+Y+VKT+S
Sbjct: 16  VGVVFEPSTYQEAIVLPHWKLAMSEELAALERTNTWDVVPLPSHAVPITCKWVYKVKTKS 75

Query: 253 DGSLERYKARLVARGFQQEYGRDYEETFAPVAHMHTVRTLXXXXXXRGWVLHQLDVKNAF 432
           DG +ERYKARLVARGFQQ +GRDY+ETFAPVAHM TVRTL      R W + Q+DVKNAF
Sbjct: 76  DGQVERYKARLVARGFQQAHGRDYDETFAPVAHMTTVRTLIAVAATRSWTISQMDVKNAF 135

Query: 433 LHGDLKEEVYMTPP 474
           LHGDL EEVYM PP
Sbjct: 136 LHGDLHEEVYMHPP 149


>gb|AAT47108.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1204

 Score =  202 bits (513), Expect = 3e-50
 Identities = 105/157 (66%), Positives = 121/157 (77%), Gaps = 2/157 (1%)
 Frame = +1

Query: 10   YSLRDRS--TLHPPVRYASASTSVSDVFEPGTYRTAVRLPEWRTAMAEELDALTRTHTWD 183
            Y+ RDR+  T+ P  RY   +T ++   EP +YR AV   EW+ AMAEEL AL RT TWD
Sbjct: 708  YNFRDRNLVTIRPEDRYGYVATVLA---EPCSYRDAVVHQEWQHAMAEELAALERTGTWD 764

Query: 184  LVPLPSHAVPITCRWIYRVKTRSDGSLERYKARLVARGFQQEYGRDYEETFAPVAHMHTV 363
            LVPLPSHA PITC+WIY+VKTRSDG+LERYKARLVARGFQQE+GRDY+ETFAPVAHM TV
Sbjct: 765  LVPLPSHARPITCKWIYKVKTRSDGTLERYKARLVARGFQQEHGRDYDETFAPVAHMTTV 824

Query: 364  RTLXXXXXXRGWVLHQLDVKNAFLHGDLKEEVYMTPP 474
            RTL      R   + QLDVKNAFL+G+L EEVYM PP
Sbjct: 825  RTLLAIASARHCNISQLDVKNAFLNGELHEEVYMRPP 861