BLASTX nr result

ID: Dioscorea21_contig00018448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018448
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN86360.1| GID1-5 [Gossypium hirsutum]                            179   5e-43
ref|XP_002512310.1| Gibberellin receptor GID1, putative [Ricinus...   177   1e-42
gb|AFG17072.1| GID1A [Vitis vinifera]                                 176   5e-42
ref|XP_002874383.1| ATGID1C/GID1C [Arabidopsis lyrata subsp. lyr...   176   5e-42
emb|CBI34320.3| unnamed protein product [Vitis vinifera]              176   5e-42

>gb|ACN86360.1| GID1-5 [Gossypium hirsutum]
          Length = 344

 Score =  179 bits (454), Expect = 5e-43
 Identities = 95/138 (68%), Positives = 102/138 (73%)
 Frame = +2

Query: 290 NEVNANESKMVVPLNTWVLISNFKLAYNMLRRPDGTFNRHLAEFLDRKVQANATPVNGVL 469
           NEVN NE KMVVPLNTWVLISNFKLAYN+LRRPDGTFNRHLAEFLDRKV ANA PV+GV 
Sbjct: 5   NEVNLNECKMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGVF 64

Query: 470 SFDQLIDRSTNLLVRIYRPTPIPDTEDPQTXXXXXXXXXXXXXXXXXXXDPFPVIIFFHG 649
           SFD LIDR T+LL RIYRPT     E+P+                       PVIIFFHG
Sbjct: 65  SFDVLIDRGTSLLSRIYRPT---TAEEPRLNIAELEKPVMAAV--------VPVIIFFHG 113

Query: 650 GSFAHSSANTAIYDSLCR 703
           GSFAHSSAN+AIYD+LCR
Sbjct: 114 GSFAHSSANSAIYDTLCR 131


>ref|XP_002512310.1| Gibberellin receptor GID1, putative [Ricinus communis]
           gi|223548271|gb|EEF49762.1| Gibberellin receptor GID1,
           putative [Ricinus communis]
          Length = 344

 Score =  177 bits (450), Expect = 1e-42
 Identities = 95/145 (65%), Positives = 103/145 (71%), Gaps = 7/145 (4%)
 Frame = +2

Query: 290 NEVNANESKMVVPLNTWVLISNFKLAYNMLRRPDGTFNRHLAEFLDRKVQANATPVNGVL 469
           NEVN NESKMVVPLNTWVLISNFKLAYN+LRRPDGTFNRHLAEFLDRKV  NA PV+GV 
Sbjct: 5   NEVNLNESKMVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPPNANPVDGVF 64

Query: 470 SFDQLIDRSTNLLVRIYRPTP-------IPDTEDPQTXXXXXXXXXXXXXXXXXXXDPFP 628
           SFD +IDR T+LL RIYRP         I + E P T                   D  P
Sbjct: 65  SFDVVIDRGTSLLSRIYRPAEGEQLQPNIAELEKPVT------------------SDVVP 106

Query: 629 VIIFFHGGSFAHSSANTAIYDSLCR 703
           VI+FFHGGSFAHSSAN+AIYD+LCR
Sbjct: 107 VILFFHGGSFAHSSANSAIYDTLCR 131


>gb|AFG17072.1| GID1A [Vitis vinifera]
          Length = 344

 Score =  176 bits (445), Expect = 5e-42
 Identities = 94/145 (64%), Positives = 103/145 (71%), Gaps = 7/145 (4%)
 Frame = +2

Query: 290 NEVNANESKMVVPLNTWVLISNFKLAYNMLRRPDGTFNRHLAEFLDRKVQANATPVNGVL 469
           NEVN +ESK VVPLNTW+LISNFKLAYN+LRRPDGTFNRHLAEFLDRKV ANA PV GV 
Sbjct: 5   NEVNLSESKRVVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVEGVF 64

Query: 470 SFDQLIDRSTNLLVRIYRPT-------PIPDTEDPQTXXXXXXXXXXXXXXXXXXXDPFP 628
           SFD +IDRST+LL RIYRP         I + E P T                   D  P
Sbjct: 65  SFDVIIDRSTSLLSRIYRPATGEEALPSIMELEKPVT------------------GDIVP 106

Query: 629 VIIFFHGGSFAHSSANTAIYDSLCR 703
           VI+FFHGGSFAHSSAN+AIYD+LCR
Sbjct: 107 VILFFHGGSFAHSSANSAIYDTLCR 131


>ref|XP_002874383.1| ATGID1C/GID1C [Arabidopsis lyrata subsp. lyrata]
           gi|297320220|gb|EFH50642.1| ATGID1C/GID1C [Arabidopsis
           lyrata subsp. lyrata]
          Length = 344

 Score =  176 bits (445), Expect = 5e-42
 Identities = 93/140 (66%), Positives = 100/140 (71%), Gaps = 3/140 (2%)
 Frame = +2

Query: 293 EVNANESKMVVPLNTWVLISNFKLAYNMLRRPDGTFNRHLAEFLDRKVQANATPVNGVLS 472
           EVN  ESK VVPLNTWVLISNFKLAYN+LRRPDGTFNRHLAEFLDRKV ANA PVNGV S
Sbjct: 6   EVNLIESKTVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVNGVFS 65

Query: 473 FDQLIDRSTNLLVRIYRPT---PIPDTEDPQTXXXXXXXXXXXXXXXXXXXDPFPVIIFF 643
           FD +IDR TNLL R+YRP    P P   D Q                    +  PVI+FF
Sbjct: 66  FDVIIDRQTNLLSRVYRPANAGPPPSVTDLQN---------------PVDGEIVPVIVFF 110

Query: 644 HGGSFAHSSANTAIYDSLCR 703
           HGGSFAHSSAN+AIYD+LCR
Sbjct: 111 HGGSFAHSSANSAIYDTLCR 130


>emb|CBI34320.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  176 bits (445), Expect = 5e-42
 Identities = 94/145 (64%), Positives = 103/145 (71%), Gaps = 7/145 (4%)
 Frame = +2

Query: 290 NEVNANESKMVVPLNTWVLISNFKLAYNMLRRPDGTFNRHLAEFLDRKVQANATPVNGVL 469
           NEVN +ESK VVPLNTW+LISNFKLAYN+LRRPDGTFNRHLAEFLDRKV ANA PV GV 
Sbjct: 5   NEVNLSESKRVVPLNTWILISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVEGVF 64

Query: 470 SFDQLIDRSTNLLVRIYRPT-------PIPDTEDPQTXXXXXXXXXXXXXXXXXXXDPFP 628
           SFD +IDRST+LL RIYRP         I + E P T                   D  P
Sbjct: 65  SFDVIIDRSTSLLSRIYRPATGEEALPSIMELEKPVT------------------GDIVP 106

Query: 629 VIIFFHGGSFAHSSANTAIYDSLCR 703
           VI+FFHGGSFAHSSAN+AIYD+LCR
Sbjct: 107 VILFFHGGSFAHSSANSAIYDTLCR 131


Top