BLASTX nr result

ID: Dioscorea21_contig00018440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018440
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group] g...   125   3e-27
gb|EEE63210.1| hypothetical protein OsJ_18020 [Oryza sativa Japo...   125   3e-27
ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat...   123   1e-26
gb|EEC78958.1| hypothetical protein OsI_19424 [Oryza sativa Indi...   122   3e-26
ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [S...   119   3e-25

>ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
           gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa
           Japonica Group]
          Length = 1070

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/116 (52%), Positives = 77/116 (66%)
 Frame = -2

Query: 349 LVLFDDMISNACKGXXXXXXXXXXXLCSVGRLEESYNMLNKMRELGFVPTEFTNNSIFYC 170
           L L  DMIS  CKG           LC++ RLEE Y + N+M++LG  P+EFT NS+FY 
Sbjct: 460 LALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYG 519

Query: 169 LCKRGDSSTAIDLLKEMRHQGHVPWIKYCTLMVQQLCKQGKVDEACSFLEEMVQIG 2
           +C+R D   A+DLL+EM+  GH PWIK CT MVQQLC  G+V EA  FL+ M+QIG
Sbjct: 520 ICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIG 575


>gb|EEE63210.1| hypothetical protein OsJ_18020 [Oryza sativa Japonica Group]
          Length = 975

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/116 (52%), Positives = 77/116 (66%)
 Frame = -2

Query: 349 LVLFDDMISNACKGXXXXXXXXXXXLCSVGRLEESYNMLNKMRELGFVPTEFTNNSIFYC 170
           L L  DMIS  CKG           LC++ RLEE Y + N+M++LG  P+EFT NS+FY 
Sbjct: 460 LALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYG 519

Query: 169 LCKRGDSSTAIDLLKEMRHQGHVPWIKYCTLMVQQLCKQGKVDEACSFLEEMVQIG 2
           +C+R D   A+DLL+EM+  GH PWIK CT MVQQLC  G+V EA  FL+ M+QIG
Sbjct: 520 ICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIG 575


>ref|XP_003566393.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08310, mitochondrial-like [Brachypodium distachyon]
          Length = 837

 Score =  123 bits (309), Expect = 1e-26
 Identities = 58/116 (50%), Positives = 76/116 (65%)
 Frame = -2

Query: 349 LVLFDDMISNACKGXXXXXXXXXXXLCSVGRLEESYNMLNKMRELGFVPTEFTNNSIFYC 170
           L L  DM    CKG           LCS+ RL+E Y M N M+ LG +P+EFT NS+FY 
Sbjct: 460 LALIKDMTGIGCKGKLLMFNDLIHELCSLDRLDEGYKMFNLMKNLGLIPSEFTYNSLFYG 519

Query: 169 LCKRGDSSTAIDLLKEMRHQGHVPWIKYCTLMVQQLCKQGKVDEACSFLEEMVQIG 2
           +C+R D + A+DLL++MR  GH PWIK CT MVQQLC  G++ EA  FL+EM+++G
Sbjct: 520 ICRRKDPNCALDLLRDMRTNGHRPWIKNCTEMVQQLCISGRITEALQFLDEMLKMG 575


>gb|EEC78958.1| hypothetical protein OsI_19424 [Oryza sativa Indica Group]
          Length = 975

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/116 (51%), Positives = 76/116 (65%)
 Frame = -2

Query: 349 LVLFDDMISNACKGXXXXXXXXXXXLCSVGRLEESYNMLNKMRELGFVPTEFTNNSIFYC 170
           L L  DMIS  CKG           LC++ RLEE Y + N+M++LG  P+EFT NS+FY 
Sbjct: 460 LALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYG 519

Query: 169 LCKRGDSSTAIDLLKEMRHQGHVPWIKYCTLMVQQLCKQGKVDEACSFLEEMVQIG 2
           +C+R     A+DLL+EM+  GH PWIK CT MVQQLC  G+V EA  FL+ M+QIG
Sbjct: 520 ICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIG 575


>ref|XP_002465622.1| hypothetical protein SORBIDRAFT_01g042420 [Sorghum bicolor]
           gi|241919476|gb|EER92620.1| hypothetical protein
           SORBIDRAFT_01g042420 [Sorghum bicolor]
          Length = 817

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/116 (48%), Positives = 76/116 (65%)
 Frame = -2

Query: 349 LVLFDDMISNACKGXXXXXXXXXXXLCSVGRLEESYNMLNKMRELGFVPTEFTNNSIFYC 170
           L L  DM+   CKG           LC+  RL+E+Y + N+M++L   P+EFT NS+FY 
Sbjct: 457 LALTKDMVGLGCKGKLLMFNDLILELCNSDRLDEAYEIFNQMKDLDLKPSEFTYNSLFYG 516

Query: 169 LCKRGDSSTAIDLLKEMRHQGHVPWIKYCTLMVQQLCKQGKVDEACSFLEEMVQIG 2
           +C+R D+S A DLL+EMR   H PWIK CT MVQQLC  G++ EA  FL+EM+++G
Sbjct: 517 ICRRKDTSAAADLLREMRTSSHKPWIKNCTEMVQQLCFSGRITEALQFLDEMLKLG 572



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/90 (30%), Positives = 51/90 (56%)
 Frame = -2

Query: 271 CSVGRLEESYNMLNKMRELGFVPTEFTNNSIFYCLCKRGDSSTAIDLLKEMRHQGHVPWI 92
           C  GR+ E+   L++M +LGF+P   T ++    +CK G++  A+ L +++  + ++P +
Sbjct: 553 CFSGRITEALQFLDEMLKLGFLPDIVTYSAAMNGMCKIGETENALGLFRDISSKCYLPDV 612

Query: 91  KYCTLMVQQLCKQGKVDEACSFLEEMVQIG 2
               +++    K GK DEA   +EEM+  G
Sbjct: 613 VAHNILINGFRKAGKFDEAQEIMEEMLSKG 642


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