BLASTX nr result

ID: Dioscorea21_contig00018438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018438
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   134   6e-30
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   121   7e-26
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   120   1e-25
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   119   3e-25
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   119   3e-25

>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  134 bits (338), Expect = 6e-30
 Identities = 61/122 (50%), Positives = 85/122 (69%), Gaps = 5/122 (4%)
 Frame = +2

Query: 2    PTRKMTKYKTIEELYN-----TCNFSLTTADPYLYEDATKQSEWKLAMDQEMESIQKNGT 166
            P R+ T+ K     Y+     +C F+L  +DP  YE+A +QSEWK AM +E+++I++N T
Sbjct: 788  PLRRSTREKKPNPKYSNTVNTSCQFALLVSDPICYEEAVEQSEWKNAMIEEIQAIERNST 847

Query: 167  WSLTQLPVGKQAVGLKWIYKSKYQPDGSLLKRKARLVAKGYSQKVGIDFEDVFSPVVRME 346
            W L   P GK  +GLKW++++KY  DGS+ K KARLVAKGYSQ+ G+DF++ FSPV R E
Sbjct: 848  WELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQGVDFDETFSPVARFE 907

Query: 347  TV 352
            TV
Sbjct: 908  TV 909


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  121 bits (303), Expect = 7e-26
 Identities = 53/111 (47%), Positives = 80/111 (72%)
 Frame = +2

Query: 20   KYKTIEELYNTCNFSLTTADPYLYEDATKQSEWKLAMDQEMESIQKNGTWSLTQLPVGKQ 199
            K++++ ++Y T    L  ADP  +E+A ++ EW  AM +E+ +I+KN TW L +LP  K 
Sbjct: 900  KFRSLRDIYETTQV-LFVADPTTFEEAVEKEEWCSAMKEEIAAIEKNETWELVELPEDKN 958

Query: 200  AVGLKWIYKSKYQPDGSLLKRKARLVAKGYSQKVGIDFEDVFSPVVRMETV 352
             +G+KW++++KY  DGS+ K KARLVAKGY+Q+ G+D++D FSPV R ETV
Sbjct: 959  VIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFETV 1009


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  120 bits (301), Expect = 1e-25
 Identities = 53/93 (56%), Positives = 72/93 (77%)
 Frame = +2

Query: 74   ADPYLYEDATKQSEWKLAMDQEMESIQKNGTWSLTQLPVGKQAVGLKWIYKSKYQPDGSL 253
            ADP  +EDA K  +WK AMD E+ +I KNGTW LT+LP G + +G+KWIYK+K+  +G +
Sbjct: 780  ADPIHFEDAVKSEKWKKAMDLELAAINKNGTWELTELPEGGKKIGVKWIYKTKFNENGEV 839

Query: 254  LKRKARLVAKGYSQKVGIDFEDVFSPVVRMETV 352
             K KARLVAKGY+Q+ G+D+ +VF+PV RMET+
Sbjct: 840  DKYKARLVAKGYTQQHGVDYTEVFAPVARMETI 872


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  119 bits (298), Expect = 3e-25
 Identities = 52/110 (47%), Positives = 79/110 (71%)
 Frame = +2

Query: 20   KYKTIEELYNTCNFSLTTADPYLYEDATKQSEWKLAMDQEMESIQKNGTWSLTQLPVGKQ 199
            K++++ ++Y T    L  ADP  +E+A ++ EW  AM +E+ +I+KN TW L +LP  K 
Sbjct: 789  KFRSLRDIYETTQV-LFVADPTTFEEAVEKEEWCSAMKEEIVAIEKNETWELVELPEDKN 847

Query: 200  AVGLKWIYKSKYQPDGSLLKRKARLVAKGYSQKVGIDFEDVFSPVVRMET 349
             +G+KW++++KY  DGS+ K KARLVAKGY+Q+ G+D++D FSPV R ET
Sbjct: 848  VIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVARFET 897


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/107 (50%), Positives = 78/107 (72%), Gaps = 1/107 (0%)
 Frame = +2

Query: 35  EELYNTCNFSL-TTADPYLYEDATKQSEWKLAMDQEMESIQKNGTWSLTQLPVGKQAVGL 211
           EE  N    +L T +DP  Y+DA +  +W+LAM+QE+E+I++N TW LT LP G + +G+
Sbjct: 562 EESVNLAQLALFTDSDPTTYDDAVRSEKWRLAMNQEIEAIERNNTWELTDLPSGGKTIGV 621

Query: 212 KWIYKSKYQPDGSLLKRKARLVAKGYSQKVGIDFEDVFSPVVRMETV 352
           KWI+K+K   +G + K KARLVAKGYSQ+ G D+ +VF+PV R+ET+
Sbjct: 622 KWIFKTKLNENGEVDKYKARLVAKGYSQQYGXDYVEVFAPVARLETI 668


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