BLASTX nr result

ID: Dioscorea21_contig00018406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018406
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529250.1| conserved hypothetical protein [Ricinus comm...    75   9e-12
ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-07

>ref|XP_002529250.1| conserved hypothetical protein [Ricinus communis]
           gi|223531286|gb|EEF33128.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 141

 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 45/139 (32%), Positives = 56/139 (40%), Gaps = 3/139 (2%)
 Frame = -3

Query: 510 MDWFLRDPRGPQWKQGWRGQVXXXXXXXXXXXXXXXXXXXXXXXXSWYTNYKEQVHRSEX 331
           M+WF    RGP+WKQGW GQ                         S YT+YK Q+H S  
Sbjct: 1   MEWFYPRRRGPEWKQGWTGQTLGSISIPPPPLLVIFGIVILLLWLSQYTDYKAQLHHSAI 60

Query: 330 XXXXXXXXXXXXXXXXLAGYM---LVDRRFKFRRLGLEQEGRDMAGSSPWGXXXXXXXXX 160
                           +A Y    +   R +  R G E        S PWG         
Sbjct: 61  NFQLFLFLLPVLLILLIASYSTNWMPYFRLRQPRSGRESVRSAEGSSQPWGIAAFVAVLL 120

Query: 159 LMVSYQSSFHSQWFRPLWR 103
           +++SYQSSFHS+WF PLWR
Sbjct: 121 VLLSYQSSFHSKWFGPLWR 139


>ref|XP_002312982.1| predicted protein [Populus trichocarpa] gi|222849390|gb|EEE86937.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 40/133 (30%), Positives = 52/133 (39%), Gaps = 2/133 (1%)
 Frame = -3

Query: 510 MDWFLRDPRGPQWKQGWRGQVXXXXXXXXXXXXXXXXXXXXXXXXSWYTNYKEQVHRSEX 331
           M+WF    RGP+WKQGW GQ                         S YT YK Q+H S  
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTMGSVSSPPLPLLAIFGIVISLLWLSHYTGYKAQLHHSAI 60

Query: 330 XXXXXXXXXXXXXXXXLAGYMLVDRRFKFRRLGLEQEGRD--MAGSSPWGXXXXXXXXXL 157
                           +A Y        + RL   Q   D   +GS PWG         +
Sbjct: 61  NLQIFLVLLPILLILFMASYS--TNWLLYYRLRSSQHDSDPRSSGSFPWGIAIFVVVLLM 118

Query: 156 MVSYQSSFHSQWF 118
           ++SY+S+FHS+WF
Sbjct: 119 LLSYRSTFHSKWF 131


>ref|XP_002306167.1| predicted protein [Populus trichocarpa] gi|222849131|gb|EEE86678.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 38/134 (28%), Positives = 48/134 (35%)
 Frame = -3

Query: 510 MDWFLRDPRGPQWKQGWRGQVXXXXXXXXXXXXXXXXXXXXXXXXSWYTNYKEQVHRSEX 331
           M+WF    RGP+WKQGW GQ                         S YT Y+ Q+  S  
Sbjct: 1   MEWFYPKRRGPEWKQGWTGQTVASMSTPPFPLLAIFGIVISLLWLSHYTGYEAQLRHSAV 60

Query: 330 XXXXXXXXXXXXXXXXLAGYMLVDRRFKFRRLGLEQEGRDMAGSSPWGXXXXXXXXXLMV 151
                           +A Y      +   R            S PWG         +++
Sbjct: 61  NLQIFLFLLPILLILFMASYSTNWLLYYRLRDSPPDSAPRSTSSFPWGIAVFVVLLLMLL 120

Query: 150 SYQSSFHSQWFRPL 109
           SYQSSFHS+WF PL
Sbjct: 121 SYQSSFHSKWFGPL 134


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