BLASTX nr result

ID: Dioscorea21_contig00018354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018354
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]    87   1e-15
ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group] g...    67   1e-09
gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indi...    67   1e-09

>ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera] gi|296084392|emb|CBI24780.3| unnamed
           protein product [Vitis vinifera]
          Length = 890

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/100 (43%), Positives = 66/100 (66%)
 Frame = +1

Query: 1   MSFFSWVGRRPGFCHSVDSYASLLRLLVQPQFHTHAQRFRISMLHSCTTSEEVRRALQVF 180
           +SFF+W+  RPGF H+V SY+S+L +L++ +    A++ RISM+ SC + E+V   L+VF
Sbjct: 85  LSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVF 144

Query: 181 FSSGSSDEGRPLVTPSLRCYNILLNLLAKFRMISEMRHVY 300
               +  E +    P+LRCYN +L  L+KF +I EM+ VY
Sbjct: 145 RKMNADGEFK--FKPTLRCYNTILMSLSKFLLIDEMKTVY 182


>emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 43/100 (43%), Positives = 66/100 (66%)
 Frame = +1

Query: 1   MSFFSWVGRRPGFCHSVDSYASLLRLLVQPQFHTHAQRFRISMLHSCTTSEEVRRALQVF 180
           +SFF+W+  RPGF H+V SY+S+L +L++ +    A++ RISM+ SC + E+V   L+VF
Sbjct: 85  LSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVF 144

Query: 181 FSSGSSDEGRPLVTPSLRCYNILLNLLAKFRMISEMRHVY 300
               +  E +    P+LRCYN +L  L+KF +I EM+ VY
Sbjct: 145 RKMNADGEFK--FKPTLRCYNTILMSLSKFLLIDEMKTVY 182


>ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
           gi|449522905|ref|XP_004168466.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/100 (38%), Positives = 60/100 (60%)
 Frame = +1

Query: 1   MSFFSWVGRRPGFCHSVDSYASLLRLLVQPQFHTHAQRFRISMLHSCTTSEEVRRALQVF 180
           ++FF+W+G++ GF H+V S+ S+L +LV   +   A+  RI M+ S  +SE     L++ 
Sbjct: 94  LAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEML 153

Query: 181 FSSGSSDEGRPLVTPSLRCYNILLNLLAKFRMISEMRHVY 300
            S     +       +LRCYN+LL LL++F MI EM+ VY
Sbjct: 154 RSMNRRVDAFKFKL-TLRCYNMLLMLLSRFLMIDEMKSVY 192


>ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
           gi|52076717|dbj|BAD45630.1| putative fertility restorer
           [Oryza sativa Japonica Group]
           gi|53793285|dbj|BAD54507.1| putative fertility restorer
           [Oryza sativa Japonica Group]
           gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa
           Japonica Group]
          Length = 991

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/102 (35%), Positives = 57/102 (55%)
 Frame = +1

Query: 1   MSFFSWVGRRPGFCHSVDSYASLLRLLVQPQFHTHAQRFRISMLHSCTTSEEVRRALQVF 180
           ++FF W+ RR GF H+ DS+A+LL LL + +     +R  +SML+   T+E++R +    
Sbjct: 74  LAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADAI 133

Query: 181 FSSGSSDEGRPLVTPSLRCYNILLNLLAKFRMISEMRHVYQQ 306
            +   +   R  ++P  +CYN  L  LA+F M   M  VY Q
Sbjct: 134 QAIRRTGSARLALSP--KCYNFALRSLARFDMTEYMGRVYSQ 173


>gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/102 (35%), Positives = 57/102 (55%)
 Frame = +1

Query: 1   MSFFSWVGRRPGFCHSVDSYASLLRLLVQPQFHTHAQRFRISMLHSCTTSEEVRRALQVF 180
           ++FF W+ RR GF H+ DS+A+LL LL + +     +R  +SML+   T+E++R +    
Sbjct: 74  LAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADAI 133

Query: 181 FSSGSSDEGRPLVTPSLRCYNILLNLLAKFRMISEMRHVYQQ 306
            +   +   R  ++P  +CYN  L  LA+F M   M  VY Q
Sbjct: 134 QAIRRTGSARLALSP--KCYNFALRSLARFDMTEYMGRVYSQ 173


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