BLASTX nr result

ID: Dioscorea21_contig00018326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018326
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275420.1| PREDICTED: scarecrow-like protein 32-like [V...    88   6e-16
emb|CAN78012.1| hypothetical protein VITISV_041420 [Vitis vinifera]    86   4e-15
emb|CBI28986.3| unnamed protein product [Vitis vinifera]               85   5e-15
ref|XP_002515699.1| DELLA protein DWARF8, putative [Ricinus comm...    82   3e-14
ref|XP_002309852.1| GRAS family transcription factor [Populus tr...    79   5e-13

>ref|XP_002275420.1| PREDICTED: scarecrow-like protein 32-like [Vitis vinifera]
          Length = 445

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 36/48 (75%), Positives = 44/48 (91%)
 Frame = -2

Query: 359 KTVKEVKFILDEHASGWGMKKEEDMLVLTWKGHSSVFTTAWVPNGFNE 216
           +TV+EVKF+LDEHASGWGMK+EEDMLVLTWKGH+S+F TAW P+G  +
Sbjct: 398 ETVREVKFLLDEHASGWGMKREEDMLVLTWKGHNSIFATAWFPSGLED 445


>emb|CAN78012.1| hypothetical protein VITISV_041420 [Vitis vinifera]
          Length = 458

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 35/48 (72%), Positives = 43/48 (89%)
 Frame = -2

Query: 359 KTVKEVKFILDEHASGWGMKKEEDMLVLTWKGHSSVFTTAWVPNGFNE 216
           +TV+EVK +LDEHASGWGMK+EEDMLVLTWKGH+S+F TAW P+G  +
Sbjct: 411 ETVREVKXLLDEHASGWGMKREEDMLVLTWKGHNSIFATAWFPSGLED 458


>emb|CBI28986.3| unnamed protein product [Vitis vinifera]
          Length = 356

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 35/44 (79%), Positives = 42/44 (95%)
 Frame = -2

Query: 359 KTVKEVKFILDEHASGWGMKKEEDMLVLTWKGHSSVFTTAWVPN 228
           +TV+EVKF+LDEHASGWGMK+EEDMLVLTWKGH+S+F TAW P+
Sbjct: 250 ETVREVKFLLDEHASGWGMKREEDMLVLTWKGHNSIFATAWFPS 293


>ref|XP_002515699.1| DELLA protein DWARF8, putative [Ricinus communis]
           gi|223545136|gb|EEF46646.1| DELLA protein DWARF8,
           putative [Ricinus communis]
          Length = 444

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 34/44 (77%), Positives = 42/44 (95%)
 Frame = -2

Query: 359 KTVKEVKFILDEHASGWGMKKEEDMLVLTWKGHSSVFTTAWVPN 228
           +T++EVK +LDEHASGWGMKKEEDMLVLTWKGH+SVF +AW+P+
Sbjct: 397 ETIREVKSLLDEHASGWGMKKEEDMLVLTWKGHNSVFASAWLPS 440


>ref|XP_002309852.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222852755|gb|EEE90302.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 449

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 34/48 (70%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
 Frame = -2

Query: 356 TVKEVKFILDEHASGWGMKKEED-MLVLTWKGHSSVFTTAWVPNGFNE 216
           T+ EV+ +L+EHA GWGMK+EED MLVLTWKGH+SVF+TAWVPNG  +
Sbjct: 402 TIGEVRSLLEEHAGGWGMKREEDHMLVLTWKGHNSVFSTAWVPNGLQD 449


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