BLASTX nr result

ID: Dioscorea21_contig00018316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018316
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW63329.1| hypothetical protein ZEAMMB73_897432 [Zea mays]         77   1e-12
ref|XP_002454503.1| hypothetical protein SORBIDRAFT_04g032300 [S...    77   1e-12
ref|XP_002305537.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002886090.1| mechanosensitive ion channel domain-containi...    76   2e-12
ref|NP_179293.3| mechanosensitive ion channel domain-containing ...    76   3e-12

>gb|AFW63329.1| hypothetical protein ZEAMMB73_897432 [Zea mays]
          Length = 960

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/75 (52%), Positives = 48/75 (64%)
 Frame = -1

Query: 227 LKILQWISLFLILTFLSCSLSIHLLQRIKXXXXXXXXXXXXXXXLVCGRLVSGWAVRIVV 48
           L +LQW+ LFLI+  L+CSLSI +L   K               L+CGRLVSGW +RI V
Sbjct: 353 LTVLQWLGLFLIIAALACSLSIKILSTKKVLGLHLWKWELLVFVLICGRLVSGWVIRIAV 412

Query: 47  LLMERNFLLRRRVLY 3
             +ERNFLLR+RVLY
Sbjct: 413 FGVERNFLLRKRVLY 427


>ref|XP_002454503.1| hypothetical protein SORBIDRAFT_04g032300 [Sorghum bicolor]
           gi|241934334|gb|EES07479.1| hypothetical protein
           SORBIDRAFT_04g032300 [Sorghum bicolor]
          Length = 1050

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/75 (52%), Positives = 48/75 (64%)
 Frame = -1

Query: 227 LKILQWISLFLILTFLSCSLSIHLLQRIKXXXXXXXXXXXXXXXLVCGRLVSGWAVRIVV 48
           L +LQW+ LFLI+  L+CSLSI +L   K               L+CGRLVSGW +RI V
Sbjct: 443 LTVLQWLGLFLIIAALACSLSIKILSTKKVLGLHLWKWLLLVFVLICGRLVSGWVIRIAV 502

Query: 47  LLMERNFLLRRRVLY 3
             +ERNFLLR+RVLY
Sbjct: 503 FGVERNFLLRKRVLY 517


>ref|XP_002305537.1| predicted protein [Populus trichocarpa] gi|222848501|gb|EEE86048.1|
           predicted protein [Populus trichocarpa]
          Length = 700

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/75 (49%), Positives = 49/75 (65%)
 Frame = -1

Query: 227 LKILQWISLFLILTFLSCSLSIHLLQRIKXXXXXXXXXXXXXXXLVCGRLVSGWAVRIVV 48
           L +LQW+SL +IL  L CSLSI  L+++K               L+CGRLVSGW + ++V
Sbjct: 93  LTVLQWLSLIVILAALVCSLSIRDLKKVKILNLKLWKWEVLLLVLICGRLVSGWGIHLIV 152

Query: 47  LLMERNFLLRRRVLY 3
             +ERNFLLR+RVLY
Sbjct: 153 FFIERNFLLRKRVLY 167


>ref|XP_002886090.1| mechanosensitive ion channel domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297331930|gb|EFH62349.1|
           mechanosensitive ion channel domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 780

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 55/152 (36%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
 Frame = -1

Query: 401 TSAASIRRRSAL-HRLKTRCRFSDDISHSPPAXXXXXXXXXXXXXDISG----------- 258
           TS  S +R+S L  R+KTR R  D     PP                SG           
Sbjct: 228 TSNMSFQRKSELISRVKTRSRLQD-----PPREEETPYSGWRSGQLKSGLLGDIDEEDDP 282

Query: 257 -----VPSS--RWSPKPLKILQWISLFLILTFLSCSLSIHLLQRIKXXXXXXXXXXXXXX 99
                VP    R     + +LQW+SL  I+  L+CSLSI   ++++              
Sbjct: 283 LAEEDVPDEYKRGKLDAITLLQWLSLIAIIAALACSLSIQSWKKVRVWNLHLWKWEVFLL 342

Query: 98  XLVCGRLVSGWAVRIVVLLMERNFLLRRRVLY 3
            L+CGRLVSGW +RIVV  +ERNFLLR+RVLY
Sbjct: 343 VLICGRLVSGWGIRIVVFFIERNFLLRKRVLY 374


>ref|NP_179293.3| mechanosensitive ion channel domain-containing protein [Arabidopsis
           thaliana] gi|330251478|gb|AEC06572.1| mechanosensitive
           ion channel domain-containing protein [Arabidopsis
           thaliana]
          Length = 779

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 55/152 (36%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
 Frame = -1

Query: 401 TSAASIRRRSAL-HRLKTRCRFSDDISHSPPAXXXXXXXXXXXXXDISG----------- 258
           TS  S +R+S L  R+KTR R  D     PP                SG           
Sbjct: 227 TSNMSFQRKSELISRVKTRSRLQD-----PPREEETPYSGWRSGQLKSGLLADIDEEDDP 281

Query: 257 -----VPSS--RWSPKPLKILQWISLFLILTFLSCSLSIHLLQRIKXXXXXXXXXXXXXX 99
                VP    R     + +LQW+SL  I+  L+CSLSI   ++++              
Sbjct: 282 LAEEDVPDEYKRGKLDAITLLQWLSLVAIIAALACSLSIQSWKKVRVWNLHLWKWEVFLL 341

Query: 98  XLVCGRLVSGWAVRIVVLLMERNFLLRRRVLY 3
            L+CGRLVSGW +RIVV  +ERNFLLR+RVLY
Sbjct: 342 VLICGRLVSGWGIRIVVFFIERNFLLRKRVLY 373


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