BLASTX nr result
ID: Dioscorea21_contig00018316
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00018316 (473 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFW63329.1| hypothetical protein ZEAMMB73_897432 [Zea mays] 77 1e-12 ref|XP_002454503.1| hypothetical protein SORBIDRAFT_04g032300 [S... 77 1e-12 ref|XP_002305537.1| predicted protein [Populus trichocarpa] gi|2... 77 2e-12 ref|XP_002886090.1| mechanosensitive ion channel domain-containi... 76 2e-12 ref|NP_179293.3| mechanosensitive ion channel domain-containing ... 76 3e-12 >gb|AFW63329.1| hypothetical protein ZEAMMB73_897432 [Zea mays] Length = 960 Score = 77.0 bits (188), Expect = 1e-12 Identities = 39/75 (52%), Positives = 48/75 (64%) Frame = -1 Query: 227 LKILQWISLFLILTFLSCSLSIHLLQRIKXXXXXXXXXXXXXXXLVCGRLVSGWAVRIVV 48 L +LQW+ LFLI+ L+CSLSI +L K L+CGRLVSGW +RI V Sbjct: 353 LTVLQWLGLFLIIAALACSLSIKILSTKKVLGLHLWKWELLVFVLICGRLVSGWVIRIAV 412 Query: 47 LLMERNFLLRRRVLY 3 +ERNFLLR+RVLY Sbjct: 413 FGVERNFLLRKRVLY 427 >ref|XP_002454503.1| hypothetical protein SORBIDRAFT_04g032300 [Sorghum bicolor] gi|241934334|gb|EES07479.1| hypothetical protein SORBIDRAFT_04g032300 [Sorghum bicolor] Length = 1050 Score = 77.0 bits (188), Expect = 1e-12 Identities = 39/75 (52%), Positives = 48/75 (64%) Frame = -1 Query: 227 LKILQWISLFLILTFLSCSLSIHLLQRIKXXXXXXXXXXXXXXXLVCGRLVSGWAVRIVV 48 L +LQW+ LFLI+ L+CSLSI +L K L+CGRLVSGW +RI V Sbjct: 443 LTVLQWLGLFLIIAALACSLSIKILSTKKVLGLHLWKWLLLVFVLICGRLVSGWVIRIAV 502 Query: 47 LLMERNFLLRRRVLY 3 +ERNFLLR+RVLY Sbjct: 503 FGVERNFLLRKRVLY 517 >ref|XP_002305537.1| predicted protein [Populus trichocarpa] gi|222848501|gb|EEE86048.1| predicted protein [Populus trichocarpa] Length = 700 Score = 76.6 bits (187), Expect = 2e-12 Identities = 37/75 (49%), Positives = 49/75 (65%) Frame = -1 Query: 227 LKILQWISLFLILTFLSCSLSIHLLQRIKXXXXXXXXXXXXXXXLVCGRLVSGWAVRIVV 48 L +LQW+SL +IL L CSLSI L+++K L+CGRLVSGW + ++V Sbjct: 93 LTVLQWLSLIVILAALVCSLSIRDLKKVKILNLKLWKWEVLLLVLICGRLVSGWGIHLIV 152 Query: 47 LLMERNFLLRRRVLY 3 +ERNFLLR+RVLY Sbjct: 153 FFIERNFLLRKRVLY 167 >ref|XP_002886090.1| mechanosensitive ion channel domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297331930|gb|EFH62349.1| mechanosensitive ion channel domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 780 Score = 76.3 bits (186), Expect = 2e-12 Identities = 55/152 (36%), Positives = 71/152 (46%), Gaps = 19/152 (12%) Frame = -1 Query: 401 TSAASIRRRSAL-HRLKTRCRFSDDISHSPPAXXXXXXXXXXXXXDISG----------- 258 TS S +R+S L R+KTR R D PP SG Sbjct: 228 TSNMSFQRKSELISRVKTRSRLQD-----PPREEETPYSGWRSGQLKSGLLGDIDEEDDP 282 Query: 257 -----VPSS--RWSPKPLKILQWISLFLILTFLSCSLSIHLLQRIKXXXXXXXXXXXXXX 99 VP R + +LQW+SL I+ L+CSLSI ++++ Sbjct: 283 LAEEDVPDEYKRGKLDAITLLQWLSLIAIIAALACSLSIQSWKKVRVWNLHLWKWEVFLL 342 Query: 98 XLVCGRLVSGWAVRIVVLLMERNFLLRRRVLY 3 L+CGRLVSGW +RIVV +ERNFLLR+RVLY Sbjct: 343 VLICGRLVSGWGIRIVVFFIERNFLLRKRVLY 374 >ref|NP_179293.3| mechanosensitive ion channel domain-containing protein [Arabidopsis thaliana] gi|330251478|gb|AEC06572.1| mechanosensitive ion channel domain-containing protein [Arabidopsis thaliana] Length = 779 Score = 75.9 bits (185), Expect = 3e-12 Identities = 55/152 (36%), Positives = 71/152 (46%), Gaps = 19/152 (12%) Frame = -1 Query: 401 TSAASIRRRSAL-HRLKTRCRFSDDISHSPPAXXXXXXXXXXXXXDISG----------- 258 TS S +R+S L R+KTR R D PP SG Sbjct: 227 TSNMSFQRKSELISRVKTRSRLQD-----PPREEETPYSGWRSGQLKSGLLADIDEEDDP 281 Query: 257 -----VPSS--RWSPKPLKILQWISLFLILTFLSCSLSIHLLQRIKXXXXXXXXXXXXXX 99 VP R + +LQW+SL I+ L+CSLSI ++++ Sbjct: 282 LAEEDVPDEYKRGKLDAITLLQWLSLVAIIAALACSLSIQSWKKVRVWNLHLWKWEVFLL 341 Query: 98 XLVCGRLVSGWAVRIVVLLMERNFLLRRRVLY 3 L+CGRLVSGW +RIVV +ERNFLLR+RVLY Sbjct: 342 VLICGRLVSGWGIRIVVFFIERNFLLRKRVLY 373