BLASTX nr result

ID: Dioscorea21_contig00018290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018290
         (630 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266544.1| PREDICTED: reticulon-like protein B22 [Vitis...   136   3e-30
gb|AFK48784.1| unknown [Lotus japonicus]                              136   4e-30
gb|AFK42356.1| unknown [Medicago truncatula]                          133   3e-29
ref|XP_002311895.1| predicted protein [Populus trichocarpa] gi|2...   131   9e-29
ref|XP_002445231.1| hypothetical protein SORBIDRAFT_07g006400 [S...   130   3e-28

>ref|XP_002266544.1| PREDICTED: reticulon-like protein B22 [Vitis vinifera]
           gi|297735759|emb|CBI18446.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  136 bits (343), Expect = 3e-30
 Identities = 69/108 (63%), Positives = 79/108 (73%)
 Frame = +2

Query: 2   FRQMNISVPVDPLEWQISQDTANSIFACLANTIGAAESVLRVAATGHDKRLFFKVIXXXX 181
           FRQ+NISVPVDPLEWQISQDTAN+I AC+ANTIGAAESVLRVAATGHDKRLF KV+    
Sbjct: 53  FRQINISVPVDPLEWQISQDTANNIVACMANTIGAAESVLRVAATGHDKRLFVKVVVCLY 112

Query: 182 XXXXXXXXXXXXTVAYAGLCIFCLYLLVESSQLFRHITARFFRTRDSL 325
                       TVAYAGL +FCLY+  E+SQ      +RF R RD++
Sbjct: 113 VLSALGRVVSGVTVAYAGLWLFCLYMFAENSQTICACMSRFMRRRDNI 160


>gb|AFK48784.1| unknown [Lotus japonicus]
          Length = 183

 Score =  136 bits (342), Expect = 4e-30
 Identities = 67/92 (72%), Positives = 72/92 (78%)
 Frame = +2

Query: 2   FRQMNISVPVDPLEWQISQDTANSIFACLANTIGAAESVLRVAATGHDKRLFFKVIXXXX 181
           FRQMNI VPVDPLEWQISQDTAN+I ACLANT+GAAESVLRVAATGHDKRLFFKVI    
Sbjct: 67  FRQMNIQVPVDPLEWQISQDTANAIVACLANTVGAAESVLRVAATGHDKRLFFKVILCLY 126

Query: 182 XXXXXXXXXXXXTVAYAGLCIFCLYLLVESSQ 277
                       T+AYAGLC+FCLY+L E SQ
Sbjct: 127 VLSAIGRLALGITIAYAGLCLFCLYMLAECSQ 158


>gb|AFK42356.1| unknown [Medicago truncatula]
          Length = 180

 Score =  133 bits (334), Expect = 3e-29
 Identities = 68/113 (60%), Positives = 75/113 (66%)
 Frame = +2

Query: 2   FRQMNISVPVDPLEWQISQDTANSIFACLANTIGAAESVLRVAATGHDKRLFFKVIXXXX 181
           FRQM I VPVDPLEWQISQDTAN+I A  ANT+GAAESVLRVAATGHDKRLFFKVI    
Sbjct: 65  FRQMTIQVPVDPLEWQISQDTANTIVASFANTVGAAESVLRVAATGHDKRLFFKVILCLY 124

Query: 182 XXXXXXXXXXXXTVAYAGLCIFCLYLLVESSQLFRHITARFFRTRDSLGRAQD 340
                       T+AYAGLC+FCLY+  E SQ      A F   ++  G  QD
Sbjct: 125 ALSALGRLALGITIAYAGLCLFCLYMFAECSQSISSCLAWFLGRKNDTGEEQD 177


>ref|XP_002311895.1| predicted protein [Populus trichocarpa] gi|222851715|gb|EEE89262.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  131 bits (330), Expect = 9e-29
 Identities = 68/101 (67%), Positives = 74/101 (73%)
 Frame = +2

Query: 2   FRQMNISVPVDPLEWQISQDTANSIFACLANTIGAAESVLRVAATGHDKRLFFKVIXXXX 181
           FRQ+NISVPVDPLEWQISQDTANSI A  ANTIGAAESVLRVAATGHDKRLFFKVI    
Sbjct: 68  FRQLNISVPVDPLEWQISQDTANSIVAWFANTIGAAESVLRVAATGHDKRLFFKVIVCLY 127

Query: 182 XXXXXXXXXXXXTVAYAGLCIFCLYLLVESSQLFRHITARF 304
                       T+AYA LC+FCLY+L E+SQ      +RF
Sbjct: 128 VLSALGRLVSGVTIAYAALCLFCLYMLAENSQSGSACISRF 168


>ref|XP_002445231.1| hypothetical protein SORBIDRAFT_07g006400 [Sorghum bicolor]
           gi|241941581|gb|EES14726.1| hypothetical protein
           SORBIDRAFT_07g006400 [Sorghum bicolor]
          Length = 186

 Score =  130 bits (326), Expect = 3e-28
 Identities = 68/113 (60%), Positives = 78/113 (69%)
 Frame = +2

Query: 2   FRQMNISVPVDPLEWQISQDTANSIFACLANTIGAAESVLRVAATGHDKRLFFKVIXXXX 181
           FR ++ISVPVDPLEWQISQ+ ANSI A LANTIGAAESVLRVAATGHDK+LFFKV+    
Sbjct: 72  FRHLHISVPVDPLEWQISQEMANSIVASLANTIGAAESVLRVAATGHDKKLFFKVVFTLY 131

Query: 182 XXXXXXXXXXXXTVAYAGLCIFCLYLLVESSQLFRHITARFFRTRDSLGRAQD 340
                        VAYA LCIFCLY+  +S+ LF  + +     RDSLG  QD
Sbjct: 132 FLAALGRVVSGAAVAYAALCIFCLYMFAQSTDLFDQLPSWVPVGRDSLGGTQD 184


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