BLASTX nr result

ID: Dioscorea21_contig00018278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018278
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001054945.1| Os05g0220100 [Oryza sativa Japonica Group] g...   199   2e-49
ref|XP_003562375.1| PREDICTED: post-GPI attachment to proteins f...   197   7e-49
ref|XP_002448009.1| hypothetical protein SORBIDRAFT_06g019590 [S...   192   3e-47
ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-47
ref|NP_001147973.1| CAB2 precursor [Zea mays] gi|195614928|gb|AC...   191   7e-47

>ref|NP_001054945.1| Os05g0220100 [Oryza sativa Japonica Group]
           gi|46981236|gb|AAT07554.1| unknown protein [Oryza sativa
           Japonica Group] gi|46981304|gb|AAT07622.1| unknown
           protein [Oryza sativa Japonica Group]
           gi|113578496|dbj|BAF16859.1| Os05g0220100 [Oryza sativa
           Japonica Group] gi|125551295|gb|EAY97004.1| hypothetical
           protein OsI_18926 [Oryza sativa Indica Group]
           gi|215768537|dbj|BAH00766.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222630646|gb|EEE62778.1| hypothetical protein
           OsJ_17581 [Oryza sativa Japonica Group]
          Length = 349

 Score =  199 bits (506), Expect = 2e-49
 Identities = 95/142 (66%), Positives = 111/142 (78%), Gaps = 2/142 (1%)
 Frame = -1

Query: 421 LDASHGDRDLIYRTCVEQCEEIGSVGDISVAHCRFSP--DVAHAKSTWYTQEPLYMQWKQ 248
           +DAS GD D  YRTCVE+C   G +G+  ++HC+ SP  D A   S+WYTQEPLYMQWKQ
Sbjct: 25  VDASLGDVDPQYRTCVEECHTTGIIGENIISHCQ-SPGNDDASVGSSWYTQEPLYMQWKQ 83

Query: 247 LNCRSECRYHCMMQREKEREATGRTPVKYHGKWPLKRIFVFQEPISAALSALNLLMHFIG 68
           LNC ++CRY+CMMQRE ER++ G  PVKYHGKWP  R+ VFQEP+SAALSA+NLLMHF G
Sbjct: 84  LNCMNDCRYYCMMQREGERQSRGLNPVKYHGKWPFIRVSVFQEPLSAALSAVNLLMHFTG 143

Query: 67  WLSFFSLVCYKLPSRSQTKRPY 2
           WLSFF LV YKLP R QTKR Y
Sbjct: 144 WLSFFLLVNYKLPVRPQTKRTY 165


>ref|XP_003562375.1| PREDICTED: post-GPI attachment to proteins factor 3-like
           [Brachypodium distachyon]
          Length = 348

 Score =  197 bits (501), Expect = 7e-49
 Identities = 89/141 (63%), Positives = 113/141 (80%), Gaps = 1/141 (0%)
 Frame = -1

Query: 421 LDASHGDRDLIYRTCVEQCEEIGSVGDISVAHCRFSPDVA-HAKSTWYTQEPLYMQWKQL 245
           ++AS GD DL YRTCVE+C+   S+G   ++HC+F  + +  A+S+WY+QEPLYMQWKQL
Sbjct: 24  VEASLGDTDLQYRTCVEECQRTSSIGRNIISHCQFPENNSTSAESSWYSQEPLYMQWKQL 83

Query: 244 NCRSECRYHCMMQREKEREATGRTPVKYHGKWPLKRIFVFQEPISAALSALNLLMHFIGW 65
           NC ++CRY+CM+QRE+ER++ G  PVKYHGKWP  R+ VFQEP+SAALSA+NLLMHF GW
Sbjct: 84  NCMTDCRYYCMVQREEERQSRGLRPVKYHGKWPFIRVSVFQEPLSAALSAINLLMHFTGW 143

Query: 64  LSFFSLVCYKLPSRSQTKRPY 2
           LSFF  V Y+LP R QTKR Y
Sbjct: 144 LSFFLQVNYRLPLRPQTKRTY 164


>ref|XP_002448009.1| hypothetical protein SORBIDRAFT_06g019590 [Sorghum bicolor]
           gi|241939192|gb|EES12337.1| hypothetical protein
           SORBIDRAFT_06g019590 [Sorghum bicolor]
          Length = 346

 Score =  192 bits (487), Expect = 3e-47
 Identities = 85/140 (60%), Positives = 108/140 (77%)
 Frame = -1

Query: 421 LDASHGDRDLIYRTCVEQCEEIGSVGDISVAHCRFSPDVAHAKSTWYTQEPLYMQWKQLN 242
           ++AS GD D  YRTCV +C+  G +G+ +++HC+   + A    +WY QE +Y+QWKQLN
Sbjct: 23  VEASLGDVDRRYRTCVRECQTTGIIGENNISHCQSKENDASVGGSWYNQEQIYIQWKQLN 82

Query: 241 CRSECRYHCMMQREKEREATGRTPVKYHGKWPLKRIFVFQEPISAALSALNLLMHFIGWL 62
           C ++CRY CMMQRE ER++ G +PVKYHGKWP  R+ VFQEP+SAALSA+NLLMHF GWL
Sbjct: 83  CMTDCRYFCMMQREGERQSLGLSPVKYHGKWPFLRVSVFQEPLSAALSAVNLLMHFTGWL 142

Query: 61  SFFSLVCYKLPSRSQTKRPY 2
           SFF LV YKLP R+QTKR Y
Sbjct: 143 SFFLLVNYKLPLRTQTKRTY 162


>ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|222853008|gb|EEE90555.1|
           predicted protein [Populus trichocarpa]
          Length = 342

 Score =  191 bits (486), Expect = 4e-47
 Identities = 87/140 (62%), Positives = 100/140 (71%)
 Frame = -1

Query: 421 LDASHGDRDLIYRTCVEQCEEIGSVGDISVAHCRFSPDVAHAKSTWYTQEPLYMQWKQLN 242
           LDAS GD D IYRTCV QCE+ G VG    +HC FS D       WY QEPLY+QWKQ +
Sbjct: 20  LDASAGDSDPIYRTCVGQCEKSGCVGQRCFSHCNFSSDGVSIDGPWYKQEPLYLQWKQWD 79

Query: 241 CRSECRYHCMMQREKEREATGRTPVKYHGKWPLKRIFVFQEPISAALSALNLLMHFIGWL 62
           C+S+CRY+CM+ REKEREA G  PVKYHGKWP KR++  QEP+S A SALNL MHF GWL
Sbjct: 80  CQSDCRYYCMLDREKEREALGHGPVKYHGKWPFKRVYGIQEPVSVAFSALNLAMHFHGWL 139

Query: 61  SFFSLVCYKLPSRSQTKRPY 2
           SFF L+ YKLP +   K  Y
Sbjct: 140 SFFILLYYKLPLKQDKKAYY 159


>ref|NP_001147973.1| CAB2 precursor [Zea mays] gi|195614928|gb|ACG29294.1| CAB2 [Zea
           mays] gi|195637118|gb|ACG38027.1| CAB2 [Zea mays]
          Length = 346

 Score =  191 bits (484), Expect = 7e-47
 Identities = 84/140 (60%), Positives = 106/140 (75%)
 Frame = -1

Query: 421 LDASHGDRDLIYRTCVEQCEEIGSVGDISVAHCRFSPDVAHAKSTWYTQEPLYMQWKQLN 242
           ++AS GD D  YRTCV +C+  G +G+  ++HC+F  +      +WY QE +Y+QWK+LN
Sbjct: 23  VEASLGDVDPRYRTCVRECQATGIIGENVISHCQFKENYTSVGVSWYNQEQIYIQWKELN 82

Query: 241 CRSECRYHCMMQREKEREATGRTPVKYHGKWPLKRIFVFQEPISAALSALNLLMHFIGWL 62
           CR++CRY CMMQRE ER++ G +PVKYHGKWP  R+ VFQEP+S ALSA+NLLMHF GWL
Sbjct: 83  CRTDCRYFCMMQREGERQSLGLSPVKYHGKWPFLRVSVFQEPLSTALSAVNLLMHFTGWL 142

Query: 61  SFFSLVCYKLPSRSQTKRPY 2
           SFF LV YKLP R QTKR Y
Sbjct: 143 SFFLLVNYKLPLRPQTKRTY 162


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