BLASTX nr result

ID: Dioscorea21_contig00018272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018272
         (1454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277134.1| PREDICTED: uncharacterized protein LOC100250...   261   3e-67
ref|XP_002307170.1| predicted protein [Populus trichocarpa] gi|2...   254   5e-65
ref|XP_002267776.1| PREDICTED: uncharacterized protein LOC100266...   249   1e-63
ref|XP_002871312.1| hypothetical protein ARALYDRAFT_487656 [Arab...   244   3e-62
gb|ABK95705.1| unknown [Populus trichocarpa]                          242   2e-61

>ref|XP_002277134.1| PREDICTED: uncharacterized protein LOC100250730 [Vitis vinifera]
            gi|297737940|emb|CBI27141.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  261 bits (667), Expect = 3e-67
 Identities = 158/340 (46%), Positives = 208/340 (61%), Gaps = 26/340 (7%)
 Frame = +1

Query: 271  NSASSFGYIEHRVSRMDTLAGVAIKYGVEVSDIKRMNGLVSDLQMFAHKSLQIPLPGRHP 450
            +S    G IEH+VS+MDTLAG+AIKYGVEV+DIKRMNGLV+DLQMFA ++LQIPLPGRHP
Sbjct: 60   SSGLGVGSIEHQVSKMDTLAGIAIKYGVEVADIKRMNGLVTDLQMFALRTLQIPLPGRHP 119

Query: 451  PSPVLANGSAS---NGERTPHQHPKDGL-DSFQSIKLKPPPKRKVTAAMTNLQGYYNLTP 618
            PSP L N S +   N + TP       L ++FQS+++K   +R V+ AM+ LQGYY L P
Sbjct: 120  PSPCLLNSSETPQRNSDWTPTDSVHRNLFETFQSLRVKSSSQRPVSPAMSTLQGYYRLKP 179

Query: 619  SRREPLAEGTEMAVYKTSRTLFLDDESLTKHSPASDPLLNHHRRTQSFANGFSPDNGNAV 798
              +    +G EMAVY+     +L+D   +K S  S+PLL+  R+ +S ANGF P+NG A 
Sbjct: 180  EDQRNAPKGFEMAVYRKESAHYLEDGPFSKQSSISNPLLSRVRKCRSLANGFMPENGEAA 239

Query: 799  -VIDLGENNESERPNGDKFVRRRQKSDADPFSRVP------XXXXXXXXXXXXXXXXXXX 957
              + + E  E +    +K +RRRQKS+ D FS  P                         
Sbjct: 240  DDMTILEAKEGDYRWNEKLIRRRQKSETD-FSCSPEMPLKEDNRSGGGGGGFSAITGKGL 298

Query: 958  ALRPKAVSRTDNDVNRVTFNP----SGDSSMANGYLFVRKSSSTSNLQESENG--SSVWP 1119
            ALR KAV+RT  D +    NP     GDS + + +  VRKSSSTSNLQ+ ++    S+WP
Sbjct: 299  ALRTKAVNRTATDADASLMNPIPVGLGDSIVTDSFAGVRKSSSTSNLQDQDSAIFPSIWP 358

Query: 1120 P--WNLKPEM-------ISRPIFDGLPKPVNVRRNKAAVD 1212
               WNLKP++       I+RPIFDGLPKP+  R+NKAA+D
Sbjct: 359  TSMWNLKPDLQALSTAAITRPIFDGLPKPITGRKNKAALD 398


>ref|XP_002307170.1| predicted protein [Populus trichocarpa] gi|222856619|gb|EEE94166.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score =  254 bits (648), Expect = 5e-65
 Identities = 164/340 (48%), Positives = 212/340 (62%), Gaps = 21/340 (6%)
 Frame = +1

Query: 256  ISLPLNSASSFGYIEHRVSRMDTLAGVAIKYGVEVSDIKRMNGLVSDLQMFAHKSLQIPL 435
            +S   +S S  G+IEH VS++DTLAGVAIKYGVEV+DIK+MN LV+DLQMFA KSLQIPL
Sbjct: 2    LSASTSSNSGVGFIEHPVSKLDTLAGVAIKYGVEVADIKKMNSLVTDLQMFALKSLQIPL 61

Query: 436  PGRHPPSPVLANGSASNG----ERTPHQH-PKDGLDSFQSIKLKPPPKRKVTAAMTNLQG 600
            PGRH PS  L+NGS   G    ERTP +    D  DSFQS+K K   + KV+ AM++LQG
Sbjct: 62   PGRHQPSSFLSNGSDVPGYNSYERTPPRGLQSDLFDSFQSLKPK-SSRCKVSPAMSSLQG 120

Query: 601  YYNLTPSRREPLAEGTEMAVYKTSRTLFLDDESLTKHSPASDPLLNHHRRTQSFANGFSP 780
            YY L P  ++ + EG EMAVY+   +   +     K SPAS P L+ HR+T+S ANGF  
Sbjct: 121  YYGLKPKDQKKIPEGFEMAVYRNGHSHHPEGGPYLKPSPASHPPLSLHRKTKSLANGFLD 180

Query: 781  D-NGNAVVIDLGENNESERPNGDKFVRRRQKSDADPFSRV---PXXXXXXXXXXXXXXXX 948
            + NG    + L E  E E    +K VRRRQKS+AD F+ +                    
Sbjct: 181  EKNGLVDKLYLDEVKEGE---SEKLVRRRQKSEAD-FTSIYTDLLIREESTGPAFSTITG 236

Query: 949  XXXALRPKAVSRTDNDVNR--VTFNPSGDSSMANGYLFVRKSSSTSNLQESEN-GSSVWP 1119
               ALRPKA +RT  DV+   +T   +G   +A+G+L VRKSSS ++L + ++  SS+WP
Sbjct: 237  KGLALRPKAGNRTTTDVDAGGLTSAQTGPGDLADGFLVVRKSSSATSLNDHDSISSSMWP 296

Query: 1120 --PWNLKPEM-------ISRPIFDGLPKPVNVRRNKAAVD 1212
               WNLKP++       I+RPIFDGLPKPV  R+NK A+D
Sbjct: 297  TSKWNLKPDLQALSAAAITRPIFDGLPKPVTGRKNKTALD 336


>ref|XP_002267776.1| PREDICTED: uncharacterized protein LOC100266699 [Vitis vinifera]
          Length = 366

 Score =  249 bits (637), Expect = 1e-63
 Identities = 168/360 (46%), Positives = 210/360 (58%), Gaps = 26/360 (7%)
 Frame = +1

Query: 211  GGFQTSVSESNGFVSISLPLNSASSFGYIEHRVSRMDTLAGVAIKYGVEVSDIKRMNGLV 390
            GG + + + SN  V+            YI H VS+MDTLAGVAIKYGVEV+DIKRMNGL 
Sbjct: 18   GGGRCAATNSNSHVN---------GVNYILHTVSKMDTLAGVAIKYGVEVADIKRMNGLA 68

Query: 391  SDLQMFAHKSLQIPLPGRHPPSPVLANGSASNGERTPHQHP-----KDGLDSFQSIKLKP 555
            +DLQMFA KSLQIPLPGRHPPSPVL+N S S+GER+  + P      + L+S QS+ LK 
Sbjct: 69   TDLQMFALKSLQIPLPGRHPPSPVLSNASTSSGERSTEETPLHLSHSNVLESLQSLGLKT 128

Query: 556  PPKRKVTAAMTNLQGYYNLTPSRREPL--AEGTEMAVYKTSRTLFLDDESLTKHSPASDP 729
            P K KV+ AM+ LQ YY L    +     AEG EM VY   +    D   L K  P S+P
Sbjct: 129  PQK-KVSPAMSTLQNYYGLKSQDKNQNGGAEGMEMTVYGAGKPHGFDFGLLPKALPISEP 187

Query: 730  LLNHHRRTQSFANGFSPDNGNA---VVIDLGENNESERPNGDKFVRRRQKSDADPFS--- 891
              N   ++++ ANGF  +NG     V I    + E ER N +K VRRRQKS+AD  +   
Sbjct: 188  SSNQDHKSRNLANGFFAENGTVAADVPISEAGDGEGERSN-EKSVRRRQKSEADSGAGPE 246

Query: 892  RVPXXXXXXXXXXXXXXXXXXXALRPKAVSRT----DNDVNRVTFNP--SGDSSMANGYL 1053
            R+                    ALRPK+ SRT    D + + +   P   GDS M  G  
Sbjct: 247  RLLKEENSGGSSGFSAITGKGLALRPKSASRTALSADAESSWLNAIPVGLGDSIMPEGLT 306

Query: 1054 FVRKSSSTSNLQE---SENGSSVWP-PWNLKPE---MISRPIFDGLPKPVNVRRNKAAVD 1212
             VRKSSST +LQE   + + SSVWP  WNLKP+   + +RPIFDGLPKP+  R+NKAA+D
Sbjct: 307  SVRKSSSTPSLQEHDQNNSSSSVWPTSWNLKPDLQALSARPIFDGLPKPITGRKNKAALD 366


>ref|XP_002871312.1| hypothetical protein ARALYDRAFT_487656 [Arabidopsis lyrata subsp.
            lyrata] gi|297317149|gb|EFH47571.1| hypothetical protein
            ARALYDRAFT_487656 [Arabidopsis lyrata subsp. lyrata]
          Length = 407

 Score =  244 bits (624), Expect = 3e-62
 Identities = 161/355 (45%), Positives = 212/355 (59%), Gaps = 35/355 (9%)
 Frame = +1

Query: 253  SISLPLNSASS--FGYIEHRVSRMDTLAGVAIKYGVEVSDIKRMNGLVSDLQMFAHKSLQ 426
            S S P + ++S   GYIEHR+S+ DTLAG+AIKYGVEV+D+KRMN LV+DLQMFA KSLQ
Sbjct: 60   SSSPPFHGSNSPDRGYIEHRISKFDTLAGIAIKYGVEVADVKRMNNLVTDLQMFALKSLQ 119

Query: 427  IPLPGRHPPSPVLANGSASNGE-------RTPHQHPKDGLDSFQSIKLKPPPKRKVTAAM 585
            IPLPGRHPPSP L+NGS ++GE        +P+   ++  DSFQS++LK   K KV+ AM
Sbjct: 120  IPLPGRHPPSPCLSNGSLNHGEGCSCHEPESPNHCDQEVFDSFQSLRLKSSEK-KVSPAM 178

Query: 586  TNLQGYYNLTPSRREPLAEG-TEMAVYKTSRTLFL---DDESLTKHSPASDPLLNHHRRT 753
             +LQGYY L P+ R     G  EM  YKT  +  L    D    +  P+++  LNHHR++
Sbjct: 179  YSLQGYYGLKPADRTVSDGGCLEMGNYKTESSHHLFNNGDNGYLRPFPSTNTPLNHHRKS 238

Query: 754  QSFANGFSPDNGNAVVIDLGENNESERPNGDKFVRRRQKSDADPFSRVP----XXXXXXX 921
            +S  N    +      ++   +N ++ PN DKF+RRRQKS+AD  SR P           
Sbjct: 239  RSLVNALIEE------VNQSPDNNTQEPNSDKFMRRRQKSEADFSSRTPELVLKEENSSS 292

Query: 922  XXXXXXXXXXXXALRPKAVSRTDNDVNRVT--FNPSG----DSSMANGYLFVRKSSSTSN 1083
                        ALR KA SRT+      T  FNP      D+ +A+ +  VRKSSS S+
Sbjct: 293  NGGFLSIAGKGLALRSKASSRTNLAAESETGNFNPVPMNLMDAPVADSFSSVRKSSSASS 352

Query: 1084 LQE----SENGS-SVWP--PWNLKPEM-----ISRPIFDGLPKPVNVRRNKAAVD 1212
            LQ+    S NGS S+WP   W+LKP++     I+  IFDGLPKP+  RRNK A+D
Sbjct: 353  LQDPDGNSNNGSLSLWPTSKWSLKPDLLTPAAITSSIFDGLPKPLTGRRNKTALD 407


>gb|ABK95705.1| unknown [Populus trichocarpa]
          Length = 359

 Score =  242 bits (617), Expect = 2e-61
 Identities = 160/361 (44%), Positives = 222/361 (61%), Gaps = 33/361 (9%)
 Frame = +1

Query: 229  VSESNGFVSISL-----PLNSASSFGYIEHRVSRMDTLAGVAIKYGVEVSDIKRMNGLVS 393
            +S SN  ++IS        NS++   YIEH+VS+ DTLAGVAIKYGVEV+D+KR+NGL +
Sbjct: 1    MSPSNSNIAISNGGGSGDSNSSTGKNYIEHQVSKRDTLAGVAIKYGVEVADVKRLNGLST 60

Query: 394  DLQMFAHKSLQIPLPGRHPPSPVLANGSASNGER-----TPHQHPKDGLDSFQSIKLKPP 558
            DLQMFA K+L IPLPGRHPPSP+L+NGSAS G        P     + L++ +S+ LK  
Sbjct: 61   DLQMFALKTLLIPLPGRHPPSPILSNGSASPGGNDVDMTPPWPRHSNVLETLESLSLK-S 119

Query: 559  PKRKVTAAMTNLQGYYNLTPSRREPLAEGTEMAVYKTSRTLFLDDESLTKHSPASDPLLN 738
            P++KV+ AM+ LQ +Y L  S+R+  AEG EMAVY+     +L++  L + +P S P  +
Sbjct: 120  PQQKVSPAMSTLQNFYGLKSSKRKDSAEGMEMAVYRRGSLDYLNEGLLHRATPVSGPSYS 179

Query: 739  HHRRTQSFANGFSPDNGNAVVID-LGENNESE-RPNGDKFVRRRQKSDADPFS----RVP 900
            +H R+ + A+ F  +NG A   + L E  E E   + +KFVRRRQK+DADP S    ++ 
Sbjct: 180  NH-RSINLADDFLSENGLAAEYNPLSEAREGEGEKSNEKFVRRRQKADADPRSGTTEKLL 238

Query: 901  XXXXXXXXXXXXXXXXXXXALRPKAVSRT----DNDVNRVTFNP--SGDSSMANGYLFVR 1062
                               ++RPK+ SRT    +++   +   P   GDS +A+    VR
Sbjct: 239  KEENNGGSRAFSPVTGKGLSMRPKSASRTSLGAESEPGWLNAMPVGLGDSIIADVSDGVR 298

Query: 1063 KSSSTSNLQESEN--GSSVWP--PWNLKPEM-------ISRPIFDGLPKPVNVRRNKAAV 1209
            KSSST +LQ+ EN   SSVWP   W+LKP++       IS PIFDGLPKP++ RR+KAA+
Sbjct: 299  KSSSTPSLQDQENSYSSSVWPTSKWSLKPDLQALSTAAISIPIFDGLPKPISGRRSKAAL 358

Query: 1210 D 1212
            D
Sbjct: 359  D 359


Top