BLASTX nr result

ID: Dioscorea21_contig00018266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018266
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465600.1| hypothetical protein SORBIDRAFT_01g041870 [S...   383   e-104
gb|ACF82434.1| unknown [Zea mays] gi|195654367|gb|ACG46651.1| DN...   381   e-104
gb|EEC74800.1| hypothetical protein OsI_10602 [Oryza sativa Indi...   380   e-103
gb|ABF94755.1| 5'-3' exonuclease, N-terminal resolvase-like doma...   380   e-103
ref|NP_001049444.1| Os03g0227300 [Oryza sativa Japonica Group] g...   380   e-103

>ref|XP_002465600.1| hypothetical protein SORBIDRAFT_01g041870 [Sorghum bicolor]
           gi|241919454|gb|EER92598.1| hypothetical protein
           SORBIDRAFT_01g041870 [Sorghum bicolor]
          Length = 421

 Score =  383 bits (983), Expect = e-104
 Identities = 189/229 (82%), Positives = 214/229 (93%)
 Frame = +1

Query: 1   GLTFRHMLYPSYKSNRIPTPDTVVQGLQYLKASMKAMSLKVIEVPGVEADDVIGTLSVNS 180
           G+TFRHMLYP+YKSNR PTPDTVVQG+QYLKAS+KAMS+KVIEVPGVEADDVIGTL+VNS
Sbjct: 177 GMTFRHMLYPAYKSNRTPTPDTVVQGMQYLKASIKAMSIKVIEVPGVEADDVIGTLAVNS 236

Query: 181 VSAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGPGMVSFGIEDFVKRYGALKPSQFVDVV 360
           VSAG+KVR+VSPDKDFFQILSPSLRLLRIAPRG GMVSFG+EDFVKRYGALKPSQFVDVV
Sbjct: 237 VSAGYKVRIVSPDKDFFQILSPSLRLLRIAPRGSGMVSFGVEDFVKRYGALKPSQFVDVV 296

Query: 361 ALAGDKSDNIPGVEGIGEINALKLITKFGSLEKLLQRVDEVEDERFKKILKENADQAILC 540
           AL+GDK+DNIPGVEGIG+INA+KLITKFGSLE LL+ VDEVED+R K+ L  +++QAILC
Sbjct: 297 ALSGDKADNIPGVEGIGDINAVKLITKFGSLENLLKSVDEVEDDRIKQALISHSEQAILC 356

Query: 541 KNLATLRSDLPSYMVPFKIQDFAFRKPQDNGEKFVSLLRAIGAYAEGFS 687
           K+LATLRSDLPSYMVPFK  D A++KPQD+G KF+ LLRA+ AYAEG S
Sbjct: 357 KSLATLRSDLPSYMVPFKTADLAYKKPQDDGVKFIKLLRALEAYAEGSS 405


>gb|ACF82434.1| unknown [Zea mays] gi|195654367|gb|ACG46651.1| DNA polymerase I
           [Zea mays] gi|413956435|gb|AFW89084.1| DNA polymerase I
           [Zea mays]
          Length = 422

 Score =  381 bits (979), Expect = e-104
 Identities = 187/229 (81%), Positives = 212/229 (92%)
 Frame = +1

Query: 1   GLTFRHMLYPSYKSNRIPTPDTVVQGLQYLKASMKAMSLKVIEVPGVEADDVIGTLSVNS 180
           G+TFRHMLYP+YKSNR PTPDTVVQG+QYLKAS+KAMS+KVIEVPGVEADDVIGTL++NS
Sbjct: 177 GMTFRHMLYPAYKSNRTPTPDTVVQGMQYLKASIKAMSIKVIEVPGVEADDVIGTLAINS 236

Query: 181 VSAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGPGMVSFGIEDFVKRYGALKPSQFVDVV 360
           VSAG+KVR+VSPDKDFFQILSPSLRLLRIAPRG GMVSFG+EDFVKRYG LKPSQFVDVV
Sbjct: 237 VSAGYKVRIVSPDKDFFQILSPSLRLLRIAPRGSGMVSFGVEDFVKRYGPLKPSQFVDVV 296

Query: 361 ALAGDKSDNIPGVEGIGEINALKLITKFGSLEKLLQRVDEVEDERFKKILKENADQAILC 540
           AL+GDK+DNIPGVEGIG+INA+KLI+KFGSL+ LL+ VDEVEDER K+ L  +++QAILC
Sbjct: 297 ALSGDKADNIPGVEGIGDINAVKLISKFGSLDNLLKSVDEVEDERIKQALISHSEQAILC 356

Query: 541 KNLATLRSDLPSYMVPFKIQDFAFRKPQDNGEKFVSLLRAIGAYAEGFS 687
           KNLATLRSDLP YMVPFK  D  F+KPQD+GEKF+ LLRA+ AYAEG S
Sbjct: 357 KNLATLRSDLPHYMVPFKTADLVFKKPQDDGEKFIKLLRALEAYAEGSS 405


>gb|EEC74800.1| hypothetical protein OsI_10602 [Oryza sativa Indica Group]
          Length = 421

 Score =  380 bits (976), Expect = e-103
 Identities = 187/229 (81%), Positives = 213/229 (93%)
 Frame = +1

Query: 1   GLTFRHMLYPSYKSNRIPTPDTVVQGLQYLKASMKAMSLKVIEVPGVEADDVIGTLSVNS 180
           G+TFRHMLYPSYKSNRIPTPDT+VQG+QYLKAS+KAMS+KVIEVPGVEADDVIGTL+V+S
Sbjct: 176 GMTFRHMLYPSYKSNRIPTPDTIVQGMQYLKASIKAMSIKVIEVPGVEADDVIGTLAVSS 235

Query: 181 VSAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGPGMVSFGIEDFVKRYGALKPSQFVDVV 360
           VSAG+KVR+VSPDKDFFQILSPSLRLLRIAPRG GMVSFG+EDFVKRYGALKPSQFVDVV
Sbjct: 236 VSAGYKVRIVSPDKDFFQILSPSLRLLRIAPRGSGMVSFGVEDFVKRYGALKPSQFVDVV 295

Query: 361 ALAGDKSDNIPGVEGIGEINALKLITKFGSLEKLLQRVDEVEDERFKKILKENADQAILC 540
           AL+GDK+DNIPGVEGIG+INA+KLITKFGSLE LL+ VDEVE+ER K+ L   ++QA+LC
Sbjct: 296 ALSGDKADNIPGVEGIGDINAVKLITKFGSLENLLKSVDEVEEERIKQALISQSEQAMLC 355

Query: 541 KNLATLRSDLPSYMVPFKIQDFAFRKPQDNGEKFVSLLRAIGAYAEGFS 687
           K+LATLRSDLPSYMVPFK  D  F+KP+D+G KF+ LLRA+ AYAEG S
Sbjct: 356 KSLATLRSDLPSYMVPFKTSDLVFQKPKDDGTKFIKLLRALEAYAEGSS 404


>gb|ABF94755.1| 5'-3' exonuclease, N-terminal resolvase-like domain containing
           protein, expressed [Oryza sativa Japonica Group]
          Length = 416

 Score =  380 bits (976), Expect = e-103
 Identities = 187/229 (81%), Positives = 213/229 (93%)
 Frame = +1

Query: 1   GLTFRHMLYPSYKSNRIPTPDTVVQGLQYLKASMKAMSLKVIEVPGVEADDVIGTLSVNS 180
           G+TFRHMLYPSYKSNRIPTPDT+VQG+QYLKAS+KAMS+KVIEVPGVEADDVIGTL+V+S
Sbjct: 171 GMTFRHMLYPSYKSNRIPTPDTIVQGMQYLKASIKAMSIKVIEVPGVEADDVIGTLAVSS 230

Query: 181 VSAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGPGMVSFGIEDFVKRYGALKPSQFVDVV 360
           VSAG+KVR+VSPDKDFFQILSPSLRLLRIAPRG GMVSFG+EDFVKRYGALKPSQFVDVV
Sbjct: 231 VSAGYKVRIVSPDKDFFQILSPSLRLLRIAPRGSGMVSFGVEDFVKRYGALKPSQFVDVV 290

Query: 361 ALAGDKSDNIPGVEGIGEINALKLITKFGSLEKLLQRVDEVEDERFKKILKENADQAILC 540
           AL+GDK+DNIPGVEGIG+INA+KLITKFGSLE LL+ VDEVE+ER K+ L   ++QA+LC
Sbjct: 291 ALSGDKADNIPGVEGIGDINAVKLITKFGSLENLLKSVDEVEEERIKQALISQSEQAMLC 350

Query: 541 KNLATLRSDLPSYMVPFKIQDFAFRKPQDNGEKFVSLLRAIGAYAEGFS 687
           K+LATLRSDLPSYMVPFK  D  F+KP+D+G KF+ LLRA+ AYAEG S
Sbjct: 351 KSLATLRSDLPSYMVPFKTSDLVFQKPKDDGAKFIKLLRALEAYAEGSS 399


>ref|NP_001049444.1| Os03g0227300 [Oryza sativa Japonica Group]
           gi|108706959|gb|ABF94754.1| 5'-3' exonuclease,
           N-terminal resolvase-like domain containing protein,
           expressed [Oryza sativa Japonica Group]
           gi|113547915|dbj|BAF11358.1| Os03g0227300 [Oryza sativa
           Japonica Group] gi|215704203|dbj|BAG93043.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222624502|gb|EEE58634.1| hypothetical protein
           OsJ_10000 [Oryza sativa Japonica Group]
          Length = 421

 Score =  380 bits (976), Expect = e-103
 Identities = 187/229 (81%), Positives = 213/229 (93%)
 Frame = +1

Query: 1   GLTFRHMLYPSYKSNRIPTPDTVVQGLQYLKASMKAMSLKVIEVPGVEADDVIGTLSVNS 180
           G+TFRHMLYPSYKSNRIPTPDT+VQG+QYLKAS+KAMS+KVIEVPGVEADDVIGTL+V+S
Sbjct: 176 GMTFRHMLYPSYKSNRIPTPDTIVQGMQYLKASIKAMSIKVIEVPGVEADDVIGTLAVSS 235

Query: 181 VSAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGPGMVSFGIEDFVKRYGALKPSQFVDVV 360
           VSAG+KVR+VSPDKDFFQILSPSLRLLRIAPRG GMVSFG+EDFVKRYGALKPSQFVDVV
Sbjct: 236 VSAGYKVRIVSPDKDFFQILSPSLRLLRIAPRGSGMVSFGVEDFVKRYGALKPSQFVDVV 295

Query: 361 ALAGDKSDNIPGVEGIGEINALKLITKFGSLEKLLQRVDEVEDERFKKILKENADQAILC 540
           AL+GDK+DNIPGVEGIG+INA+KLITKFGSLE LL+ VDEVE+ER K+ L   ++QA+LC
Sbjct: 296 ALSGDKADNIPGVEGIGDINAVKLITKFGSLENLLKSVDEVEEERIKQALISQSEQAMLC 355

Query: 541 KNLATLRSDLPSYMVPFKIQDFAFRKPQDNGEKFVSLLRAIGAYAEGFS 687
           K+LATLRSDLPSYMVPFK  D  F+KP+D+G KF+ LLRA+ AYAEG S
Sbjct: 356 KSLATLRSDLPSYMVPFKTSDLVFQKPKDDGAKFIKLLRALEAYAEGSS 404


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