BLASTX nr result

ID: Dioscorea21_contig00018252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018252
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264...   142   3e-32
emb|CBI29080.3| unnamed protein product [Vitis vinifera]              142   3e-32
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]                  139   3e-31
tpg|DAA48540.1| TPA: hypothetical protein ZEAMMB73_942409 [Zea m...   137   9e-31
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co...   137   1e-30

>ref|XP_002271720.2| PREDICTED: uncharacterized protein LOC100264243 [Vitis vinifera]
          Length = 1671

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/92 (72%), Positives = 79/92 (85%)
 Frame = -2

Query: 355  LRLLVPPSYPKTSPTVVDSLPVELSQNSDDLSAKVKSRFSASLRCLSQPMSVKEMARTWD 176
            LRLLVP +YP +SP ++D  PVE+S+  +DLS K KSRFS SLR LSQPMS+ E+ARTWD
Sbjct: 1579 LRLLVPTNYPNSSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQPMSLGEIARTWD 1638

Query: 175  VCARKVIAEYAQQTGGGSFSSRYGAWENCVSA 80
            VCAR VI+EYAQQ+GGGSFSSRYGAWENC+SA
Sbjct: 1639 VCARAVISEYAQQSGGGSFSSRYGAWENCLSA 1670


>emb|CBI29080.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/92 (72%), Positives = 79/92 (85%)
 Frame = -2

Query: 355 LRLLVPPSYPKTSPTVVDSLPVELSQNSDDLSAKVKSRFSASLRCLSQPMSVKEMARTWD 176
           LRLLVP +YP +SP ++D  PVE+S+  +DLS K KSRFS SLR LSQPMS+ E+ARTWD
Sbjct: 208 LRLLVPTNYPNSSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQPMSLGEIARTWD 267

Query: 175 VCARKVIAEYAQQTGGGSFSSRYGAWENCVSA 80
           VCAR VI+EYAQQ+GGGSFSSRYGAWENC+SA
Sbjct: 268 VCARAVISEYAQQSGGGSFSSRYGAWENCLSA 299


>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
          Length = 1405

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/92 (70%), Positives = 77/92 (83%)
 Frame = -2

Query: 355  LRLLVPPSYPKTSPTVVDSLPVELSQNSDDLSAKVKSRFSASLRCLSQPMSVKEMARTWD 176
            LRLLVP +YP  SP ++D  PVE+S+  +DLS K KSRFS SLR LSQPMS+ E+ARTWD
Sbjct: 1313 LRLLVPTNYPNCSPILLDKFPVEISKEYEDLSVKAKSRFSISLRSLSQPMSLGEIARTWD 1372

Query: 175  VCARKVIAEYAQQTGGGSFSSRYGAWENCVSA 80
            VCAR VI+EYAQQ+GGGSFSS+YG WENC+SA
Sbjct: 1373 VCARTVISEYAQQSGGGSFSSKYGTWENCLSA 1404


>tpg|DAA48540.1| TPA: hypothetical protein ZEAMMB73_942409 [Zea mays]
          Length = 560

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/92 (70%), Positives = 75/92 (81%)
 Frame = -2

Query: 355 LRLLVPPSYPKTSPTVVDSLPVELSQNSDDLSAKVKSRFSASLRCLSQPMSVKEMARTWD 176
           LRLLVP SYPK SP ++D  P E  +NSDDLS K KS+FS  LR L++PMS++E+ARTWD
Sbjct: 468 LRLLVPGSYPKCSPVLLDKFPDEQCRNSDDLSTKAKSKFSVLLRGLAEPMSLREIARTWD 527

Query: 175 VCARKVIAEYAQQTGGGSFSSRYGAWENCVSA 80
            CARKVIAEYAQQTGGGSFSS YG WE+CV A
Sbjct: 528 ACARKVIAEYAQQTGGGSFSSSYGCWESCVGA 559


>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
            gi|223530005|gb|EEF31930.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1382

 Score =  137 bits (344), Expect = 1e-30
 Identities = 64/92 (69%), Positives = 78/92 (84%)
 Frame = -2

Query: 355  LRLLVPPSYPKTSPTVVDSLPVELSQNSDDLSAKVKSRFSASLRCLSQPMSVKEMARTWD 176
            LRLLVP +YP  SP ++D LPVE+S+  +DLS K KSRF+ SLR LSQPMS+ E+ARTWD
Sbjct: 1290 LRLLVPTNYPNCSPILLDKLPVEVSKEYEDLSVKAKSRFNISLRSLSQPMSLGEIARTWD 1349

Query: 175  VCARKVIAEYAQQTGGGSFSSRYGAWENCVSA 80
            VCAR VI+E+AQQ+GGGSFSS+YG WENC+SA
Sbjct: 1350 VCARAVISEHAQQSGGGSFSSKYGTWENCLSA 1381


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