BLASTX nr result

ID: Dioscorea21_contig00018246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018246
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532310.1| NEDD8 ultimate buster, putative [Ricinus com...    62   4e-08
ref|XP_001781827.1| predicted protein [Physcomitrella patens sub...    62   4e-08
ref|XP_002331011.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
ref|XP_002527272.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_002324589.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002532310.1| NEDD8 ultimate buster, putative [Ricinus communis]
           gi|223527979|gb|EEF30062.1| NEDD8 ultimate buster,
           putative [Ricinus communis]
          Length = 559

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/47 (68%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = -3

Query: 260 DEEMEDAIAKELT-GDALADYDIEVTKEGEAVKEYLALLESL*FQNR 123
           D EMED IA+E+  GDAL+DYDIEVTKEGEA+ EY+ALL S+   NR
Sbjct: 508 DLEMEDTIAEEIAKGDALSDYDIEVTKEGEAINEYMALLNSVDSSNR 554


>ref|XP_001781827.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162666734|gb|EDQ53381.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 571

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/40 (70%), Positives = 35/40 (87%)
 Frame = -3

Query: 260 DEEMEDAIAKELTGDALADYDIEVTKEGEAVKEYLALLES 141
           DEEME+ IA+E+TGD  A+YDIEV+KEG+A+ EYLALL S
Sbjct: 525 DEEMEEEIAREITGDPFAEYDIEVSKEGDAISEYLALLNS 564


>ref|XP_002331011.1| predicted protein [Populus trichocarpa] gi|222872941|gb|EEF10072.1|
           predicted protein [Populus trichocarpa]
          Length = 566

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/41 (70%), Positives = 36/41 (87%), Gaps = 1/41 (2%)
 Frame = -3

Query: 260 DEEMEDAIAKELT-GDALADYDIEVTKEGEAVKEYLALLES 141
           D EMED IA ELT GDAL+DY+I+VT+EG+A+ EYLALL+S
Sbjct: 526 DLEMEDEIADELTRGDALSDYNIDVTQEGDAINEYLALLDS 566


>ref|XP_002527272.1| conserved hypothetical protein [Ricinus communis]
           gi|223533365|gb|EEF35116.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 80

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/42 (66%), Positives = 36/42 (85%), Gaps = 1/42 (2%)
 Frame = -3

Query: 260 DEEMEDAIAKELT-GDALADYDIEVTKEGEAVKEYLALLESL 138
           D EMED IA+++   DAL+DYDI+VTKEGEA+ EYLALL+S+
Sbjct: 29  DVEMEDEIAEQIAKADALSDYDIDVTKEGEAITEYLALLDSV 70


>ref|XP_002324589.1| predicted protein [Populus trichocarpa] gi|222866023|gb|EEF03154.1|
           predicted protein [Populus trichocarpa]
          Length = 578

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 30/41 (73%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
 Frame = -3

Query: 260 DEEMEDAIAKELT-GDALADYDIEVTKEGEAVKEYLALLES 141
           D EME  IA EL  GDAL+DYDIEV KEGEA+ EYLALL S
Sbjct: 527 DVEMEGEIADELARGDALSDYDIEVAKEGEAINEYLALLAS 567


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