BLASTX nr result

ID: Dioscorea21_contig00018228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018228
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297935.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-54
ref|XP_004145462.1| PREDICTED: LOB domain-containing protein 4-l...   214   4e-54
ref|XP_002304584.1| predicted protein [Populus trichocarpa] gi|2...   211   5e-53
ref|XP_003607861.1| LOB domain-containing protein [Medicago trun...   206   2e-51
ref|XP_002893847.1| LOB domain protein 4 [Arabidopsis lyrata sub...   205   3e-51

>ref|XP_002297935.1| predicted protein [Populus trichocarpa] gi|222845193|gb|EEE82740.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  215 bits (547), Expect = 3e-54
 Identities = 101/127 (79%), Positives = 117/127 (92%)
 Frame = -2

Query: 431 KRQGGGSPCAACKLLRRRCAEDCVFAPYFPADQPHKFASVHKVFGASNVNKLLQELPVHH 252
           ++QG  +PCAACKLLRRRCA+DCVFAPYFPAD+P KFA+VHKVFGASNVNK+LQELPVH 
Sbjct: 6   RKQGAPAPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQ 65

Query: 251 RSDAVSSLVYEANARVRDPVYGCVGAISSLQQQVDALQTQLAIAQAEMLHIRMSHTAYLA 72
           R DAVSS+VYEANARVRDPVYGCVGAISSLQQQ+DALQTQLA+AQAE++H+R+  TA L+
Sbjct: 66  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTATLS 125

Query: 71  RLGLTPA 51
             GL+PA
Sbjct: 126 NHGLSPA 132


>ref|XP_004145462.1| PREDICTED: LOB domain-containing protein 4-like [Cucumis sativus]
           gi|449513057|ref|XP_004164216.1| PREDICTED: LOB
           domain-containing protein 4-like [Cucumis sativus]
          Length = 170

 Score =  214 bits (546), Expect = 4e-54
 Identities = 100/126 (79%), Positives = 114/126 (90%)
 Frame = -2

Query: 431 KRQGGGSPCAACKLLRRRCAEDCVFAPYFPADQPHKFASVHKVFGASNVNKLLQELPVHH 252
           K+ GG +PCAACKLLRRRC E+CVFAPYFPADQPHKFA+VHKVFGASNVNK+LQELP+H 
Sbjct: 8   KQGGGAAPCAACKLLRRRCGEECVFAPYFPADQPHKFANVHKVFGASNVNKMLQELPIHQ 67

Query: 251 RSDAVSSLVYEANARVRDPVYGCVGAISSLQQQVDALQTQLAIAQAEMLHIRMSHTAYLA 72
           R DAVSSLVYEANARVRDPVYGCVGAISSLQ Q+DALQTQLA+AQAE++H+R+  TA  +
Sbjct: 68  RGDAVSSLVYEANARVRDPVYGCVGAISSLQHQIDALQTQLALAQAEVVHLRVRQTASFS 127

Query: 71  RLGLTP 54
             GL+P
Sbjct: 128 NYGLSP 133


>ref|XP_002304584.1| predicted protein [Populus trichocarpa] gi|222842016|gb|EEE79563.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  211 bits (537), Expect = 5e-53
 Identities = 100/127 (78%), Positives = 114/127 (89%)
 Frame = -2

Query: 431 KRQGGGSPCAACKLLRRRCAEDCVFAPYFPADQPHKFASVHKVFGASNVNKLLQELPVHH 252
           ++QG  SPCAACKLLRRRCA+DCVFAPYFPAD+P KFA+VHKVFGASNVNK+LQELPVH 
Sbjct: 6   RKQGAPSPCAACKLLRRRCAQDCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQ 65

Query: 251 RSDAVSSLVYEANARVRDPVYGCVGAISSLQQQVDALQTQLAIAQAEMLHIRMSHTAYLA 72
           R DAVSS+VYEANARVRDPVYGCVGAISSLQQQ+D LQTQLA+AQAE++H+R+  TA L+
Sbjct: 66  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLALAQAEVVHLRVRQTATLS 125

Query: 71  RLGLTPA 51
             G  PA
Sbjct: 126 NHGPPPA 132


>ref|XP_003607861.1| LOB domain-containing protein [Medicago truncatula]
           gi|355508916|gb|AES90058.1| LOB domain-containing
           protein [Medicago truncatula]
          Length = 174

 Score =  206 bits (524), Expect = 2e-51
 Identities = 95/117 (81%), Positives = 108/117 (92%)
 Frame = -2

Query: 431 KRQGGGSPCAACKLLRRRCAEDCVFAPYFPADQPHKFASVHKVFGASNVNKLLQELPVHH 252
           K+QG  SPCAACKLLRRRCA+DC+FAPYFPAD+PHKFA+VHKVFGASNVNK+LQ+LP H 
Sbjct: 8   KKQGAASPCAACKLLRRRCAQDCLFAPYFPADEPHKFANVHKVFGASNVNKMLQDLPEHQ 67

Query: 251 RSDAVSSLVYEANARVRDPVYGCVGAISSLQQQVDALQTQLAIAQAEMLHIRMSHTA 81
           R DAVSS+VYEANARVRDPVYGCVGAISSLQQQ+D LQTQLA+AQAE +H+R+  TA
Sbjct: 68  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQTA 124


>ref|XP_002893847.1| LOB domain protein 4 [Arabidopsis lyrata subsp. lyrata]
           gi|297339689|gb|EFH70106.1| LOB domain protein 4
           [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  205 bits (522), Expect = 3e-51
 Identities = 94/126 (74%), Positives = 111/126 (88%)
 Frame = -2

Query: 431 KRQGGGSPCAACKLLRRRCAEDCVFAPYFPADQPHKFASVHKVFGASNVNKLLQELPVHH 252
           ++QG  SPCAACKLLRRRCA+DCVF+PYFPAD+P KFA+VH+VFGASNVNK+LQELP+H 
Sbjct: 6   RKQGAASPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQ 65

Query: 251 RSDAVSSLVYEANARVRDPVYGCVGAISSLQQQVDALQTQLAIAQAEMLHIRMSHTAYLA 72
           R DAVSS+VYEANARVRDPVYGCVGAISSLQQQ+D LQ QLA+AQAE++H+R+ H+    
Sbjct: 66  RGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRHSTNFP 125

Query: 71  RLGLTP 54
             GL P
Sbjct: 126 GHGLCP 131


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