BLASTX nr result

ID: Dioscorea21_contig00018208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018208
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    90   2e-16
ref|XP_002517743.1| conserved hypothetical protein [Ricinus comm...    68   7e-10
ref|XP_004162713.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    67   1e-09
ref|XP_004154184.1| PREDICTED: E3 ubiquitin-protein ligase liste...    67   1e-09
ref|XP_004145301.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...    67   1e-09

>ref|XP_003632124.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            listerin-like [Vitis vinifera]
          Length = 1923

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/84 (50%), Positives = 61/84 (72%)
 Frame = -3

Query: 257  VQMTLAKLTAVSIGYCWQEFTVGDWNFVLAQSLKWMKLLVLSMEEVAENIDDVVMKYTAN 78
            VQ+ L+KL AVS+GYCW+EF   DW FVL    +W++  V+ MEEVAEN++DV++   ++
Sbjct: 1336 VQILLSKLMAVSVGYCWKEFNEEDWEFVLFHLRRWIESAVVMMEEVAENVNDVIINRPSS 1395

Query: 77   KKSELILKELDAAIQALDSLQISI 6
               E+ILKEL+ A+  LDS +I+I
Sbjct: 1396 DDKEVILKELEHAVLLLDSPRINI 1419


>ref|XP_002517743.1| conserved hypothetical protein [Ricinus communis]
            gi|223543141|gb|EEF44675.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1912

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/84 (35%), Positives = 50/84 (59%)
 Frame = -3

Query: 257  VQMTLAKLTAVSIGYCWQEFTVGDWNFVLAQSLKWMKLLVLSMEEVAENIDDVVMKYTAN 78
            V+M L+KL  +S+GYCW+EF   DW+F   Q   W++  V+ +EEV EN+DD +   T  
Sbjct: 1320 VKMFLSKLMVISVGYCWKEFAEEDWDFFFLQLRSWIQSAVVILEEVTENVDDAITNSTTT 1379

Query: 77   KKSELILKELDAAIQALDSLQISI 6
               + +L++L+  +   D   I++
Sbjct: 1380 DNLD-VLRKLEQLVSISDLSPINV 1402


>ref|XP_004162713.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            listerin-like [Cucumis sativus]
          Length = 1755

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/74 (37%), Positives = 52/74 (70%)
 Frame = -3

Query: 257  VQMTLAKLTAVSIGYCWQEFTVGDWNFVLAQSLKWMKLLVLSMEEVAENIDDVVMKYTAN 78
            VQM L++L  VS+GYCW++F+  DW F+L Q +  ++  V+ MEE+AE+++D+++K +  
Sbjct: 1290 VQMLLSELMVVSVGYCWKQFSDEDWEFLLFQLMSGIQSAVVIMEEIAESVNDIIVKSSTT 1349

Query: 77   KKSELILKELDAAI 36
                 IL++L+ ++
Sbjct: 1350 MDLNEILEKLEQSV 1363


>ref|XP_004154184.1| PREDICTED: E3 ubiquitin-protein ligase listerin-like, partial
            [Cucumis sativus]
          Length = 1660

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/74 (37%), Positives = 52/74 (70%)
 Frame = -3

Query: 257  VQMTLAKLTAVSIGYCWQEFTVGDWNFVLAQSLKWMKLLVLSMEEVAENIDDVVMKYTAN 78
            VQM L++L  VS+GYCW++F+  DW F+L Q +  ++  V+ MEE+AE+++D+++K +  
Sbjct: 1070 VQMLLSELMVVSVGYCWKQFSDEDWEFLLFQLMSGIQSAVVIMEEIAESVNDIIVKSSTT 1129

Query: 77   KKSELILKELDAAI 36
                 IL++L+ ++
Sbjct: 1130 MDLNEILEKLEQSV 1143


>ref|XP_004145301.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            listerin-like [Cucumis sativus]
          Length = 1919

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/74 (37%), Positives = 52/74 (70%)
 Frame = -3

Query: 257  VQMTLAKLTAVSIGYCWQEFTVGDWNFVLAQSLKWMKLLVLSMEEVAENIDDVVMKYTAN 78
            VQM L++L  VS+GYCW++F+  DW F+L Q +  ++  V+ MEE+AE+++D+++K +  
Sbjct: 1329 VQMLLSELMVVSVGYCWKQFSDEDWEFLLFQLMSGIQSAVVIMEEIAESVNDIIVKSSTT 1388

Query: 77   KKSELILKELDAAI 36
                 IL++L+ ++
Sbjct: 1389 MDLNEILEKLEQSV 1402


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