BLASTX nr result

ID: Dioscorea21_contig00018207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018207
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
ref|XP_003562027.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
gb|EEE58395.1| hypothetical protein OsJ_09560 [Oryza sativa Japo...    81   8e-14
gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indi...    81   8e-14

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/113 (39%), Positives = 69/113 (61%)
 Frame = +2

Query: 5    EVAKVIAWLPALGEIKVLISCLCKWSMIKEMLDLFDILAPRNCHLFFNICNDILRALCAG 184
            ++A+   WL  L + KVL+ CLC+   +KE L+L + +     HL  ++CN  L  LC  
Sbjct: 678  DLARRDKWLLELKDCKVLVGCLCQQKFLKEALELLESMLATYPHLRLDVCNMFLEKLCVV 737

Query: 185  NFTIIGCLLLEELLQRGFILDHEAYVNIIKGFIKEQKFAEALGIVDIVLGKNI 343
             FT I   L++E LQ+G ILDH A+ ++I GF KE++F+EA  I + +  KN+
Sbjct: 738  GFTTIAHALVDEFLQQGCILDHTAHSHLISGFCKEKRFSEAFTIFESMQAKNL 790


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Vitis vinifera]
          Length = 1273

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/113 (39%), Positives = 69/113 (61%)
 Frame = +2

Query: 5    EVAKVIAWLPALGEIKVLISCLCKWSMIKEMLDLFDILAPRNCHLFFNICNDILRALCAG 184
            ++A+   WL  L + KVL+ CLC+   +KE L+L + +     HL  ++CN  L  LC  
Sbjct: 695  DLARRDKWLLELKDCKVLVGCLCQQKFLKEALELLESMLATYPHLRLDVCNMFLEKLCVV 754

Query: 185  NFTIIGCLLLEELLQRGFILDHEAYVNIIKGFIKEQKFAEALGIVDIVLGKNI 343
             FT I   L++E LQ+G ILDH A+ ++I GF KE++F+EA  I + +  KN+
Sbjct: 755  GFTTIAHALVDEFLQQGCILDHTAHSHLISGFCKEKRFSEAFTIFESMQAKNL 807


>ref|XP_003562027.1| PREDICTED: pentatricopeptide repeat-containing protein
            At5g15280-like, partial [Brachypodium distachyon]
          Length = 1278

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/111 (35%), Positives = 67/111 (60%)
 Frame = +2

Query: 8    VAKVIAWLPALGEIKVLISCLCKWSMIKEMLDLFDILAPRNCHLFFNICNDILRALCAGN 187
            VA   +W P   ++  LIS +C+W +I+E L L  +L     +L  +    +L+ LC   
Sbjct: 697  VATEFSWSPDSKDMIALISHMCEWGVIEEALKLISVLTDCYPNLCLSAYCALLKELCRTG 756

Query: 188  FTIIGCLLLEELLQRGFILDHEAYVNIIKGFIKEQKFAEALGIVDIVLGKN 340
            +T +GC +LE LL++G  + H   +++ +GF+KEQK AE++G+ D+ L K+
Sbjct: 757  YTSVGCAMLEALLEKGVAVRHSLILSVTEGFLKEQKSAESIGLYDMWLNKS 807


>gb|EEE58395.1| hypothetical protein OsJ_09560 [Oryza sativa Japonica Group]
          Length = 1276

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/105 (36%), Positives = 61/105 (58%)
 Frame = +2

Query: 26   WLPALGEIKVLISCLCKWSMIKEMLDLFDILAPRNCHLFFNICNDILRALCAGNFTIIGC 205
            W P   ++  LIS L KW +I+E L+   +L      LFF+    +L  LC    T +GC
Sbjct: 713  WSPGSRDVIPLISHLSKWGVIEEALEFISVLLDCYPSLFFSAYCQLLEELCMTGCTSVGC 772

Query: 206  LLLEELLQRGFILDHEAYVNIIKGFIKEQKFAEALGIVDIVLGKN 340
             +LE L+++G  +D     N+++GF+KE K AE +G+ D++L +N
Sbjct: 773  AMLEALIEKGVAVDPSLICNVMEGFLKEHKIAETIGMYDMLLNRN 817


>gb|EEC74592.1| hypothetical protein OsI_10174 [Oryza sativa Indica Group]
          Length = 1276

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/105 (36%), Positives = 61/105 (58%)
 Frame = +2

Query: 26   WLPALGEIKVLISCLCKWSMIKEMLDLFDILAPRNCHLFFNICNDILRALCAGNFTIIGC 205
            W P   ++  LIS L KW +I+E L+   +L      LFF+    +L  LC    T +GC
Sbjct: 713  WSPGSRDVIPLISHLSKWGVIEEALEFISVLLDCYPSLFFSAYCQLLEELCMTGCTSVGC 772

Query: 206  LLLEELLQRGFILDHEAYVNIIKGFIKEQKFAEALGIVDIVLGKN 340
             +LE L+++G  +D     N+++GF+KE K AE +G+ D++L +N
Sbjct: 773  AMLEALIEKGVAVDPSLICNVMEGFLKEHKIAETIGMYDMLLNRN 817


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