BLASTX nr result

ID: Dioscorea21_contig00018189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018189
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC90267.1| nucleotide-binding site leucine-rich repeat prote...   119   3e-25
gb|AFC90286.1| nucleotide-binding site leucine-rich repeat prote...   115   3e-24
gb|AFC90233.1| nucleotide-binding site leucine-rich repeat prote...   114   1e-23
gb|AAO89150.1| NBS-type resistance protein [Gossypium barbadense]     114   1e-23
gb|AFC90752.1| nucleotide-binding site leucine-rich repeat prote...   113   1e-23

>gb|AFC90267.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron kanehirai]
          Length = 299

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/117 (52%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1   GVGKTTIMTQIYNEL-SEKEVFEIVIWVTVSSSFNEKELQNKIAERLHCQLSSSADLMSR 177
           GVGKTTIM QI+N L  EK+ F+ V WVT+S  FN  +LQ+ IA+ L+  LS   D   R
Sbjct: 2   GVGKTTIMKQIHNRLLKEKDKFDGVFWVTISKEFNVLKLQSDIAKELNFSLSDDQDKRRR 61

Query: 178 AQVLHGALRRRRNFVIILDGIWNSVSLQNVGIPEPNRSNGSKVVWTTRFMDVCNSME 348
           A  L+ AL +++ +V+I+D +W S SL+ VGIPEP RSNG K+V TTR ++VC  ME
Sbjct: 62  ASQLYEALSQQKRYVLIIDDLWKSFSLEKVGIPEPIRSNGCKLVLTTRSLEVCRRME 118


>gb|AFC90286.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron kanehirai]
          Length = 298

 Score =  115 bits (289), Expect = 3e-24
 Identities = 59/117 (50%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
 Frame = +1

Query: 1   GVGKTTIMTQIYNELSEKEV-FEIVIWVTVSSSFNEKELQNKIAERLHCQLSSSADLMSR 177
           GVGKTTIM  I+N+L EK   F+ V+WVT+S  FN  +LQ  IA  L+ +LS   D+  R
Sbjct: 2   GVGKTTIMKHIHNQLLEKTCKFDCVLWVTISKPFNITKLQRDIAMELNFKLSDDDDVRRR 61

Query: 178 AQVLHGALRRRRNFVIILDGIWNSVSLQNVGIPEPNRSNGSKVVWTTRFMDVCNSME 348
           +  LH AL R  ++V+ILD +W +  L+ VGIP+P RSNG KVV TTR ++VC  M+
Sbjct: 62  SSQLHAALSRGMSYVLILDDLWEAFPLETVGIPDPTRSNGCKVVLTTRSLEVCAMMD 118


>gb|AFC90233.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 300

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/116 (50%), Positives = 77/116 (66%), Gaps = 1/116 (0%)
 Frame = +1

Query: 1   GVGKTTIMTQIYNELSEK-EVFEIVIWVTVSSSFNEKELQNKIAERLHCQLSSSADLMSR 177
           GVGKTTIM  I+N+L E+ + F+ V WVTVS  FN +ELQ +IA+ L   +S   D+  R
Sbjct: 2   GVGKTTIMKHIHNKLLEETDEFDSVFWVTVSKEFNVRELQREIAKELKVCISDDEDVSRR 61

Query: 178 AQVLHGALRRRRNFVIILDGIWNSVSLQNVGIPEPNRSNGSKVVWTTRFMDVCNSM 345
           A+ L+  L  R+ +V+ILD +W    L+ VGIPEP RSNG K+V TTR  +VC  M
Sbjct: 62  ARELYAVLSPRKRYVLILDDLWEVFPLERVGIPEPTRSNGCKLVLTTRSFEVCRKM 117


>gb|AAO89150.1| NBS-type resistance protein [Gossypium barbadense]
          Length = 166

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/115 (48%), Positives = 79/115 (68%)
 Frame = +1

Query: 1   GVGKTTIMTQIYNELSEKEVFEIVIWVTVSSSFNEKELQNKIAERLHCQLSSSADLMSRA 180
           GVGKTTIM  I+N+L +++ FE V+WVT+S  FN  +LQN IA  L+ ++   A+ + RA
Sbjct: 1   GVGKTTIMKHIHNDLLKEQRFERVVWVTISKEFNIVKLQNDIASALNGKIPKEANKVRRA 60

Query: 181 QVLHGALRRRRNFVIILDGIWNSVSLQNVGIPEPNRSNGSKVVWTTRFMDVCNSM 345
            +L   L+R    V+ILD +W+ VSL+ +GIP+P+ SNG K+V TTR   VC SM
Sbjct: 61  AILSEMLKRAGKHVLILDDVWSEVSLEEIGIPKPSSSNGYKLVLTTRVEQVCKSM 115


>gb|AFC90752.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron formosanum]
          Length = 267

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/113 (50%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
 Frame = +1

Query: 10  KTTIMTQIYNELSEK-EVFEIVIWVTVSSSFNEKELQNKIAERLHCQLSSSADLMSRAQV 186
           KTTIM  I+N+L E+ + F+ V WVTVS +FN +ELQ +IA+ L   +S   D++ RA+ 
Sbjct: 1   KTTIMKYIHNKLLEETDEFDSVFWVTVSKAFNVRELQREIAKELKVCISDDEDVIRRAKE 60

Query: 187 LHGALRRRRNFVIILDGIWNSVSLQNVGIPEPNRSNGSKVVWTTRFMDVCNSM 345
           LH  L RR  +V+ILD +W +  L+ VGIPEP RSNG K+V TTR  +VC  M
Sbjct: 61  LHAVLSRRERYVLILDDLWEAFPLEKVGIPEPTRSNGCKLVLTTRSFEVCRRM 113


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