BLASTX nr result

ID: Dioscorea21_contig00018161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018161
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207...   216   5e-54
ref|XP_002277017.1| PREDICTED: transcription initiation factor T...   215   1e-53
ref|XP_002456149.1| hypothetical protein SORBIDRAFT_03g031220 [S...   209   6e-52
ref|XP_002532706.1| Transcription initiation factor TFIID subuni...   209   8e-52
ref|XP_003569565.1| PREDICTED: transcription initiation factor T...   208   2e-51

>ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207528 [Cucumis sativus]
           gi|449494264|ref|XP_004159496.1| PREDICTED:
           uncharacterized protein LOC101229675 [Cucumis sativus]
          Length = 220

 Score =  216 bits (551), Expect = 5e-54
 Identities = 103/126 (81%), Positives = 119/126 (94%)
 Frame = -3

Query: 779 DNMDVELGKFPPGGDPDKMAKMQSILSQFTEEQMSRYESFRRSGFQKSTMKRILAGITGS 600
           +N++VEL KFP  GDPDKMAKMQ+ILSQFTEEQMSRYESFRR+GFQK+ MKR+LA I+G+
Sbjct: 94  ENVEVELAKFPSSGDPDKMAKMQAILSQFTEEQMSRYESFRRAGFQKANMKRLLASISGT 153

Query: 599 QKISIPMTIVVSGIAKMFVGELIETARMVMTERKDCGPIRPCHIREAYRRLRLEGKIPKR 420
           QKIS+PMTIVVSGIAKMFVGEL+ETAR+VMTER D GPIRPCH+REAYRRL+LEGKIP++
Sbjct: 154 QKISVPMTIVVSGIAKMFVGELVETARVVMTERNDTGPIRPCHLREAYRRLKLEGKIPRK 213

Query: 419 SVPRLF 402
           SVPRLF
Sbjct: 214 SVPRLF 219


>ref|XP_002277017.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Vitis
           vinifera] gi|296086768|emb|CBI32917.3| unnamed protein
           product [Vitis vinifera]
          Length = 198

 Score =  215 bits (548), Expect = 1e-53
 Identities = 105/126 (83%), Positives = 115/126 (91%)
 Frame = -3

Query: 779 DNMDVELGKFPPGGDPDKMAKMQSILSQFTEEQMSRYESFRRSGFQKSTMKRILAGITGS 600
           +NMDVELGK P  GDP KMAKMQ+ILSQFTEEQMSRYESFRRSGFQK+ MK++L  ITGS
Sbjct: 72  ENMDVELGKLPTSGDPHKMAKMQAILSQFTEEQMSRYESFRRSGFQKANMKKLLVSITGS 131

Query: 599 QKISIPMTIVVSGIAKMFVGELIETARMVMTERKDCGPIRPCHIREAYRRLRLEGKIPKR 420
           QKIS PMTIV SGIAKMFVGEL+ETARMVMTERK+ GPIRPCHIREAYRRL+LEGK+P+R
Sbjct: 132 QKISAPMTIVASGIAKMFVGELVETARMVMTERKETGPIRPCHIREAYRRLKLEGKVPRR 191

Query: 419 SVPRLF 402
           SV RLF
Sbjct: 192 SVSRLF 197


>ref|XP_002456149.1| hypothetical protein SORBIDRAFT_03g031220 [Sorghum bicolor]
           gi|241928124|gb|EES01269.1| hypothetical protein
           SORBIDRAFT_03g031220 [Sorghum bicolor]
          Length = 209

 Score =  209 bits (533), Expect = 6e-52
 Identities = 105/127 (82%), Positives = 116/127 (91%), Gaps = 1/127 (0%)
 Frame = -3

Query: 779 DNMDVELGKFPPG-GDPDKMAKMQSILSQFTEEQMSRYESFRRSGFQKSTMKRILAGITG 603
           D M+V+L K P   GDPDK+AKM +ILSQFTE+QM+RYESFRRSGFQKS MKR+L GITG
Sbjct: 82  DQMEVDLEKLPSSTGDPDKLAKMNAILSQFTEQQMNRYESFRRSGFQKSNMKRLLVGITG 141

Query: 602 SQKISIPMTIVVSGIAKMFVGELIETARMVMTERKDCGPIRPCHIREAYRRLRLEGKIPK 423
           SQKISIP +IVVSGIAKMFVGELIETAR+VMTERKD GPIRPCHIREAYRRL+LEGKIP+
Sbjct: 142 SQKISIPTSIVVSGIAKMFVGELIETARVVMTERKDSGPIRPCHIREAYRRLKLEGKIPR 201

Query: 422 RSVPRLF 402
           RSVPRLF
Sbjct: 202 RSVPRLF 208


>ref|XP_002532706.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223527552|gb|EEF29673.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 205

 Score =  209 bits (532), Expect = 8e-52
 Identities = 101/126 (80%), Positives = 114/126 (90%)
 Frame = -3

Query: 779 DNMDVELGKFPPGGDPDKMAKMQSILSQFTEEQMSRYESFRRSGFQKSTMKRILAGITGS 600
           +N+DVEL KFP   DPDKMAKMQ+ILSQFTE QM+RYESFRRS  QK+ M+R+L  ITGS
Sbjct: 79  ENVDVELAKFPSTADPDKMAKMQAILSQFTENQMTRYESFRRSALQKANMRRLLVSITGS 138

Query: 599 QKISIPMTIVVSGIAKMFVGELIETARMVMTERKDCGPIRPCHIREAYRRLRLEGKIPKR 420
           QKIS+PMTIVV GIAKMFVGEL+ETAR+VMTERK+ GPIRPCHIREAYRRL+LEGK+PKR
Sbjct: 139 QKISLPMTIVVCGIAKMFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKR 198

Query: 419 SVPRLF 402
           SVPRLF
Sbjct: 199 SVPRLF 204


>ref|XP_003569565.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
           [Brachypodium distachyon]
          Length = 216

 Score =  208 bits (529), Expect = 2e-51
 Identities = 103/127 (81%), Positives = 117/127 (92%), Gaps = 1/127 (0%)
 Frame = -3

Query: 779 DNMDVELGKFPPG-GDPDKMAKMQSILSQFTEEQMSRYESFRRSGFQKSTMKRILAGITG 603
           D+M+V+L K P G  DPDK+AKM ++LSQFTE+QM+RYESFRRSGFQKS MK++LA ITG
Sbjct: 89  DHMEVDLDKLPSGTSDPDKLAKMNALLSQFTEDQMNRYESFRRSGFQKSNMKKLLASITG 148

Query: 602 SQKISIPMTIVVSGIAKMFVGELIETARMVMTERKDCGPIRPCHIREAYRRLRLEGKIPK 423
           SQKIS+P TIVVSGIAKMFVGE+IETAR+VMTERKD GPIRPCHIREAYRRL+LEGKIPK
Sbjct: 149 SQKISMPTTIVVSGIAKMFVGEVIETARIVMTERKDSGPIRPCHIREAYRRLKLEGKIPK 208

Query: 422 RSVPRLF 402
           RSVPRLF
Sbjct: 209 RSVPRLF 215


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