BLASTX nr result

ID: Dioscorea21_contig00018157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018157
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65396.1| hypothetical protein VITISV_009442 [Vitis vinifera]   260   7e-68
emb|CBI34852.3| unnamed protein product [Vitis vinifera]              259   2e-67
ref|XP_002272751.1| PREDICTED: ribosomal RNA-processing protein ...   259   2e-67
ref|NP_001047303.1| Os02g0593900 [Oryza sativa Japonica Group] g...   257   8e-67
ref|XP_003575272.1| PREDICTED: ribosomal RNA-processing protein ...   256   2e-66

>emb|CAN65396.1| hypothetical protein VITISV_009442 [Vitis vinifera]
          Length = 237

 Score =  260 bits (665), Expect = 7e-68
 Identities = 118/144 (81%), Positives = 137/144 (95%)
 Frame = -1

Query: 445 LFDVYHAGYQEQMSHWPEQPVNIIIKWLKNHSSSMVVADFGCGSATLAKNVKNKVFSIDL 266
           LF+VYHAGYQEQMSHWP+QPVNIIIKWLK+HS S++VADFGCG A LA+NVKNKVFS DL
Sbjct: 52  LFNVYHAGYQEQMSHWPQQPVNIIIKWLKDHSPSLIVADFGCGDARLARNVKNKVFSFDL 111

Query: 265 VANDPSVIACDMSHTPLDSSSVDVTVFCLSLMGTNFSSYLQEANRVLKPCGWLLIAEVRS 86
           V++DPSVI CDMS+TPL+SSS+DV VFCLSLMGTNFSSYLQEA+RVLKPCGWLLIAEV+S
Sbjct: 112 VSSDPSVIVCDMSNTPLESSSIDVAVFCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKS 171

Query: 85  RFDPNNGGADPDKFCEAVCKLGYT 14
           RFDP+NGGADP++F +A+CKLG+T
Sbjct: 172 RFDPSNGGADPNRFSKAICKLGFT 195


>emb|CBI34852.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score =  259 bits (661), Expect = 2e-67
 Identities = 117/144 (81%), Positives = 136/144 (94%)
 Frame = -1

Query: 445 LFDVYHAGYQEQMSHWPEQPVNIIIKWLKNHSSSMVVADFGCGSATLAKNVKNKVFSIDL 266
           LF+VYH GYQEQMSHWP+QPVNIIIKWLK+HS S++VADFGCG A LA+NVKNKVFS DL
Sbjct: 35  LFNVYHVGYQEQMSHWPQQPVNIIIKWLKDHSPSLIVADFGCGDARLARNVKNKVFSFDL 94

Query: 265 VANDPSVIACDMSHTPLDSSSVDVTVFCLSLMGTNFSSYLQEANRVLKPCGWLLIAEVRS 86
           V++DPSVI CDMS+TPL+SSS+DV VFCLSLMGTNFSSYLQEA+RVLKPCGWLLIAEV+S
Sbjct: 95  VSSDPSVIVCDMSNTPLESSSIDVAVFCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKS 154

Query: 85  RFDPNNGGADPDKFCEAVCKLGYT 14
           RFDP+NGGADP++F +A+CKLG+T
Sbjct: 155 RFDPSNGGADPNRFSKAICKLGFT 178


>ref|XP_002272751.1| PREDICTED: ribosomal RNA-processing protein 8 [Vitis vinifera]
          Length = 263

 Score =  259 bits (661), Expect = 2e-67
 Identities = 117/144 (81%), Positives = 136/144 (94%)
 Frame = -1

Query: 445 LFDVYHAGYQEQMSHWPEQPVNIIIKWLKNHSSSMVVADFGCGSATLAKNVKNKVFSIDL 266
           LF+VYH GYQEQMSHWP+QPVNIIIKWLK+HS S++VADFGCG A LA+NVKNKVFS DL
Sbjct: 78  LFNVYHVGYQEQMSHWPQQPVNIIIKWLKDHSPSLIVADFGCGDARLARNVKNKVFSFDL 137

Query: 265 VANDPSVIACDMSHTPLDSSSVDVTVFCLSLMGTNFSSYLQEANRVLKPCGWLLIAEVRS 86
           V++DPSVI CDMS+TPL+SSS+DV VFCLSLMGTNFSSYLQEA+RVLKPCGWLLIAEV+S
Sbjct: 138 VSSDPSVIVCDMSNTPLESSSIDVAVFCLSLMGTNFSSYLQEAHRVLKPCGWLLIAEVKS 197

Query: 85  RFDPNNGGADPDKFCEAVCKLGYT 14
           RFDP+NGGADP++F +A+CKLG+T
Sbjct: 198 RFDPSNGGADPNRFSKAICKLGFT 221


>ref|NP_001047303.1| Os02g0593900 [Oryza sativa Japonica Group]
           gi|113536834|dbj|BAF09217.1| Os02g0593900 [Oryza sativa
           Japonica Group] gi|125540112|gb|EAY86507.1| hypothetical
           protein OsI_07887 [Oryza sativa Indica Group]
           gi|125582717|gb|EAZ23648.1| hypothetical protein
           OsJ_07349 [Oryza sativa Japonica Group]
          Length = 292

 Score =  257 bits (656), Expect = 8e-67
 Identities = 117/149 (78%), Positives = 135/149 (90%)
 Frame = -1

Query: 448 ELFDVYHAGYQEQMSHWPEQPVNIIIKWLKNHSSSMVVADFGCGSATLAKNVKNKVFSID 269
           +LFDVYHAGY+EQMSHWPEQPVN+II WLK+HS+S  VADFGCG+A ++KNVKNKVFSID
Sbjct: 107 DLFDVYHAGYREQMSHWPEQPVNVIINWLKSHSASWTVADFGCGNAAVSKNVKNKVFSID 166

Query: 268 LVANDPSVIACDMSHTPLDSSSVDVTVFCLSLMGTNFSSYLQEANRVLKPCGWLLIAEVR 89
           LV+ DPSVIACDM+HTPL+SSSVDV +FCLSLMGTN+ SY++EANRVLKP GWLLIAEVR
Sbjct: 167 LVSEDPSVIACDMAHTPLESSSVDVAIFCLSLMGTNYPSYIEEANRVLKPSGWLLIAEVR 226

Query: 88  SRFDPNNGGADPDKFCEAVCKLGYTSVLK 2
           SR DPN  GADPDKFCEA+ KLG++ V K
Sbjct: 227 SRLDPNTAGADPDKFCEAISKLGFSLVSK 255


>ref|XP_003575272.1| PREDICTED: ribosomal RNA-processing protein 8-like [Brachypodium
           distachyon]
          Length = 289

 Score =  256 bits (653), Expect = 2e-66
 Identities = 120/149 (80%), Positives = 133/149 (89%)
 Frame = -1

Query: 448 ELFDVYHAGYQEQMSHWPEQPVNIIIKWLKNHSSSMVVADFGCGSATLAKNVKNKVFSID 269
           ELFDVYHAGYQEQMS WPEQPVN+II WLK+H+ S  VADFGCGSA +AKNVKNKVFSID
Sbjct: 104 ELFDVYHAGYQEQMSRWPEQPVNVIINWLKSHNKSWTVADFGCGSAAVAKNVKNKVFSID 163

Query: 268 LVANDPSVIACDMSHTPLDSSSVDVTVFCLSLMGTNFSSYLQEANRVLKPCGWLLIAEVR 89
           LV++DPSVIACDM+HTPL+ SSVDV +FCLSLMGTNF SYLQEANRVLKP GWLLIAEVR
Sbjct: 164 LVSDDPSVIACDMAHTPLEPSSVDVAIFCLSLMGTNFPSYLQEANRVLKPSGWLLIAEVR 223

Query: 88  SRFDPNNGGADPDKFCEAVCKLGYTSVLK 2
           SR DPN GGADPDKF EA+ +LG++ V K
Sbjct: 224 SRLDPNTGGADPDKFSEAISQLGFSLVSK 252


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