BLASTX nr result

ID: Dioscorea21_contig00018121 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018121
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH67049.1| OSIGBa0127A14.1 [Oryza sativa Indica Group] gi|2...   168   6e-40
ref|NP_001053605.1| Os04g0571300 [Oryza sativa Japonica Group] g...   168   6e-40
ref|XP_003581544.1| PREDICTED: F-box protein PP2-A13-like [Brach...   158   8e-37
ref|XP_003574219.1| PREDICTED: F-box protein PP2-A13-like [Brach...   156   2e-36
ref|XP_002446956.1| hypothetical protein SORBIDRAFT_06g025860 [S...   156   3e-36

>emb|CAH67049.1| OSIGBa0127A14.1 [Oryza sativa Indica Group]
           gi|218195399|gb|EEC77826.1| hypothetical protein
           OsI_17038 [Oryza sativa Indica Group]
          Length = 304

 Score =  168 bits (426), Expect = 6e-40
 Identities = 92/145 (63%), Positives = 103/145 (71%), Gaps = 15/145 (10%)
 Frame = -3

Query: 392 MGAGCSSMVGPEGDGRA-RQRGLADMPESCVAAVMLRLDPPEICGLARLGRSFRAAADAD 216
           MGAG SSM+GPEG GR   Q  L DMPESCVAAV+L LDPPEIC +ARL R+FR AA AD
Sbjct: 1   MGAGASSMMGPEGYGRGWGQTSLGDMPESCVAAVLLYLDPPEICKVARLNRAFRGAASAD 60

Query: 215 FVWEAKLPANYLYLMDVA-----------AEEG---KCSWGGMSKKEIYARLSRPIPFDG 78
            VW AKLPANY YL  +A           A EG   +CS   M KKEIYARL RP PFDG
Sbjct: 61  CVWAAKLPANYRYLAALAAAADDDSGGDGATEGNGSRCSSAAMIKKEIYARLCRPTPFDG 120

Query: 77  GTKEFWLEKCKGKVCMLISSKALSI 3
           GTKEFW+EK KG +C+ ISSKA++I
Sbjct: 121 GTKEFWMEKNKGGLCISISSKAMAI 145


>ref|NP_001053605.1| Os04g0571300 [Oryza sativa Japonica Group]
           gi|113565176|dbj|BAF15519.1| Os04g0571300 [Oryza sativa
           Japonica Group] gi|125591339|gb|EAZ31689.1| hypothetical
           protein OsJ_15837 [Oryza sativa Japonica Group]
           gi|215693927|dbj|BAG89126.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 304

 Score =  168 bits (426), Expect = 6e-40
 Identities = 92/145 (63%), Positives = 103/145 (71%), Gaps = 15/145 (10%)
 Frame = -3

Query: 392 MGAGCSSMVGPEGDGRA-RQRGLADMPESCVAAVMLRLDPPEICGLARLGRSFRAAADAD 216
           MGAG SSM+GPEG GR   Q  L DMPESCVAAV+L LDPPEIC +ARL R+FR AA AD
Sbjct: 1   MGAGASSMMGPEGYGRGWGQTSLGDMPESCVAAVLLYLDPPEICKVARLNRAFRGAASAD 60

Query: 215 FVWEAKLPANYLYLMDVA-----------AEEG---KCSWGGMSKKEIYARLSRPIPFDG 78
            VW AKLPANY YL  +A           A EG   +CS   M KKEIYARL RP PFDG
Sbjct: 61  CVWAAKLPANYRYLAALAAAADDDSGGDGATEGNGSRCSSAAMIKKEIYARLCRPTPFDG 120

Query: 77  GTKEFWLEKCKGKVCMLISSKALSI 3
           GTKEFW+EK KG +C+ ISSKA++I
Sbjct: 121 GTKEFWMEKNKGGLCISISSKAMAI 145


>ref|XP_003581544.1| PREDICTED: F-box protein PP2-A13-like [Brachypodium distachyon]
          Length = 271

 Score =  158 bits (399), Expect = 8e-37
 Identities = 86/144 (59%), Positives = 96/144 (66%), Gaps = 14/144 (9%)
 Frame = -3

Query: 392 MGAGCSSMVGPEGDGRARQRGLADMPESCVAAVMLRLDPPEICGLARLGRSFRAAADADF 213
           MGAG SSM+G EG G   Q  L DMPESCVA V+L LDPPEIC +ARL R+FR AA AD 
Sbjct: 1   MGAGASSMMGSEGWG---QTSLGDMPESCVAPVLLYLDPPEICLVARLNRAFRGAASADC 57

Query: 212 VWEAKLPANYLYLMDVAAE--------------EGKCSWGGMSKKEIYARLSRPIPFDGG 75
           VW  KLPANY YL  +AA                G+C   G  KK IYARL RP PFDGG
Sbjct: 58  VWGTKLPANYRYLAALAAAADDDDSGSTGSTEGNGRCCPSGAIKKGIYARLCRPTPFDGG 117

Query: 74  TKEFWLEKCKGKVCMLISSKALSI 3
           TKEFW+EK KG +CM ISSKA++I
Sbjct: 118 TKEFWIEKSKGGLCMSISSKAMAI 141


>ref|XP_003574219.1| PREDICTED: F-box protein PP2-A13-like [Brachypodium distachyon]
          Length = 301

 Score =  156 bits (395), Expect = 2e-36
 Identities = 83/136 (61%), Positives = 95/136 (69%), Gaps = 6/136 (4%)
 Frame = -3

Query: 392 MGAGCSSM---VGPEGDGRARQRGLADMPESCVAAVMLRLDPPEICGLARLGRSFRAAAD 222
           MGAG SS+   +G E        GL D+PE C A V+LRLD PEIC LARL  +FR AA 
Sbjct: 1   MGAGVSSLFFGIGGEAAQEPGAPGLGDLPELCAAEVLLRLDAPEICRLARLNHAFRGAAG 60

Query: 221 ADFVWEAKLPANYLYLM---DVAAEEGKCSWGGMSKKEIYARLSRPIPFDGGTKEFWLEK 51
           ADFVWEAKLP NY +LM   +   +EG+       KKEIYARLSRP+PFDGGTKEFWLEK
Sbjct: 61  ADFVWEAKLPENYRHLMGYVEGGGDEGRRRRRRAGKKEIYARLSRPVPFDGGTKEFWLEK 120

Query: 50  CKGKVCMLISSKALSI 3
            KG+VCM +SSKAL I
Sbjct: 121 SKGRVCMALSSKALVI 136


>ref|XP_002446956.1| hypothetical protein SORBIDRAFT_06g025860 [Sorghum bicolor]
           gi|241938139|gb|EES11284.1| hypothetical protein
           SORBIDRAFT_06g025860 [Sorghum bicolor]
          Length = 313

 Score =  156 bits (394), Expect = 3e-36
 Identities = 87/150 (58%), Positives = 98/150 (65%), Gaps = 20/150 (13%)
 Frame = -3

Query: 392 MGAGCS-SMVGPEGDGRAR---QRGLADMPESCVAAVMLRLDPPEICGLARLGRSFRAAA 225
           MG G S S+V PEG GR R   Q  L DMPESCVAAV+L LDP EIC +A L R+FR AA
Sbjct: 1   MGVGASTSVVAPEGYGRGRGWGQTSLGDMPESCVAAVLLYLDPAEICQVACLNRAFRGAA 60

Query: 224 DADFVWEAKLPANYLYLMDVAA----------------EEGKCSWGGMSKKEIYARLSRP 93
            AD +W AKLPANY YL  +AA                ++G+C      KKEIYARL RP
Sbjct: 61  SADCIWAAKLPANYRYLAALAAAADDDDDCGCGGAAEGDDGRCCSSAAIKKEIYARLCRP 120

Query: 92  IPFDGGTKEFWLEKCKGKVCMLISSKALSI 3
            PFDGGTKEFW+EK KG  CM ISSKA+SI
Sbjct: 121 TPFDGGTKEFWIEKNKGGFCMSISSKAMSI 150


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