BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018111
         (795 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32365.3| unnamed protein product [Vitis vinifera]              200   3e-49
ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein S...   193   4e-47
ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putat...   192   7e-47
ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein S...   191   1e-46
ref|XP_003518666.1| PREDICTED: small nuclear ribonucleoprotein S...   189   5e-46

>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  200 bits (508), Expect = 3e-49
 Identities = 99/104 (95%), Positives = 102/104 (98%)
 Frame = +2

Query: 47  RLSSPTMKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLSLKGKNPVS 226
           RL SP MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKL+LKGKNPV+
Sbjct: 25  RLHSPKMKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVT 84

Query: 227 LDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPM 358
           LDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPM
Sbjct: 85  LDHLSVRGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPM 128


>ref|XP_002277211.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Vitis vinifera] gi|225436988|ref|XP_002277231.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Vitis vinifera]
          Length = 114

 Score =  193 bits (490), Expect = 4e-47
 Identities = 95/98 (96%), Positives = 98/98 (100%)
 Frame = +2

Query: 65  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLSLKGKNPVSLDHLSV 244
           MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKL+LKGKNPV+LDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 245 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPM 358
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPM
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPM 98


>ref|XP_002520764.1| small nuclear ribonucleoprotein sm d1, putative [Ricinus communis]
           gi|223540149|gb|EEF41726.1| small nuclear
           ribonucleoprotein sm d1, putative [Ricinus communis]
          Length = 114

 Score =  192 bits (488), Expect = 7e-47
 Identities = 95/98 (96%), Positives = 98/98 (100%)
 Frame = +2

Query: 65  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLSLKGKNPVSLDHLSV 244
           MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKL+LKGKNPV+LDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 245 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPM 358
           RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRP+
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPL 98


>ref|XP_002275736.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like [Vitis
           vinifera]
          Length = 114

 Score =  191 bits (486), Expect = 1e-46
 Identities = 93/98 (94%), Positives = 98/98 (100%)
 Frame = +2

Query: 65  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLSLKGKNPVSLDHLSV 244
           MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLKTVKL+LKGKNPV++DHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTMDHLSV 60

Query: 245 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPM 358
           RGNNIRYYILPDS+NLETLLVEETPRVKPKKPTAGRPM
Sbjct: 61  RGNNIRYYILPDSINLETLLVEETPRVKPKKPTAGRPM 98


>ref|XP_003518666.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Glycine max]
          Length = 116

 Score =  189 bits (481), Expect = 5e-46
 Identities = 92/98 (93%), Positives = 98/98 (100%)
 Frame = +2

Query: 65  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLSLKGKNPVSLDHLSV 244
           MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKL+LKGKNPV+LDHLSV
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 245 RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRPM 358
           RGNNIRYYILPDSLNLETLLVEETP++KPKKPTAG+P+
Sbjct: 61  RGNNIRYYILPDSLNLETLLVEETPKIKPKKPTAGKPL 98