BLASTX nr result

ID: Dioscorea21_contig00018085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018085
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264387.1| PREDICTED: protein farnesyltransferase/geran...   460   e-127
ref|XP_002534116.1| protein farnesyltransferase alpha subunit, p...   452   e-125
ref|NP_001063659.1| Os09g0514400 [Oryza sativa Japonica Group] g...   443   e-122
ref|XP_004167540.1| PREDICTED: protein farnesyltransferase/geran...   429   e-117
ref|XP_002310440.1| predicted protein [Populus trichocarpa] gi|2...   427   e-117

>ref|XP_002264387.1| PREDICTED: protein farnesyltransferase/geranylgeranyltransferase
            type-1 subunit alpha [Vitis vinifera]
            gi|297743768|emb|CBI36651.3| unnamed protein product
            [Vitis vinifera]
          Length = 331

 Score =  460 bits (1184), Expect = e-127
 Identities = 209/318 (65%), Positives = 254/318 (79%)
 Frame = -1

Query: 1183 PLSQRPEWADVRPVPQDDGPNPVVPIHYRENFREAMDYFRAVYLADERSLRSLNLTSEVI 1004
            PLSQRPEW+DV PVPQDDGPNPVVPI Y+++F E MDYFRAVY ADERSLRSL++T+E I
Sbjct: 11   PLSQRPEWSDVTPVPQDDGPNPVVPIAYKDDFTETMDYFRAVYFADERSLRSLHVTAEAI 70

Query: 1003 GLNPGNYTVWHFRRLVLEALNADLYEERDYVDRVAERFPKNYQIWHHRRWLAEKLGPKAT 824
             +N GNYTVWHFRRL+L ALNADL+EE +++ +VA   PKNYQIWHHRRW+AEKLG  AT
Sbjct: 71   HMNAGNYTVWHFRRLILGALNADLHEELNFIKKVANGNPKNYQIWHHRRWVAEKLGSDAT 130

Query: 823  DKELEFTKKIFTIDAKNYHTWSHRQWVLQALGGWDDELDYCQKLIEDDVFNNSAWNQRYF 644
             KEL+FTKKI ++DAKNYH WSHRQWVLQ LGGW+DELDYC++L+EDD+FNNSAWNQRYF
Sbjct: 131  SKELDFTKKILSLDAKNYHAWSHRQWVLQELGGWEDELDYCKQLLEDDIFNNSAWNQRYF 190

Query: 643  VITKSPLLGGLQAMRESEVSFAIKAILTNPQNESPWRYLRGLYKGDIEQLLSDNQVPEVC 464
            VITKSP LGGL+AMRESEV++ + AI+  P+NESPWRYLRGLYK D +  ++D QV  VC
Sbjct: 191  VITKSPFLGGLEAMRESEVNYTVGAIIAKPENESPWRYLRGLYKDDAQSWVNDPQVSSVC 250

Query: 463  LQVLKSGRNXXXXXXXXXXXXXFGFQPSDEFKRIVEGLTNSESSSSDANLATSVCNILET 284
            L VL + RN              GFQPS +F   V+ L   +   SD+NLAT+VC++L  
Sbjct: 251  LTVLSAKRNTVFALSTLLDLLCHGFQPSQDFINAVDALKTPDLDQSDSNLATAVCSVLGH 310

Query: 283  VDPLRANYWAWRRSTLPS 230
            +DP+R NYWAWR++ LP+
Sbjct: 311  MDPMRVNYWAWRKNKLPA 328


>ref|XP_002534116.1| protein farnesyltransferase alpha subunit, putative [Ricinus
            communis] gi|223525828|gb|EEF28267.1| protein
            farnesyltransferase alpha subunit, putative [Ricinus
            communis]
          Length = 333

 Score =  452 bits (1164), Expect = e-125
 Identities = 209/321 (65%), Positives = 254/321 (79%)
 Frame = -1

Query: 1195 EECLPLSQRPEWADVRPVPQDDGPNPVVPIHYRENFREAMDYFRAVYLADERSLRSLNLT 1016
            EE +PLSQRPEW+DV PV QDDGPNPVVPI Y+  F E M+YFRA+YL+DERS R+L LT
Sbjct: 10   EETVPLSQRPEWSDVIPVQQDDGPNPVVPIAYKPEFEETMNYFRAIYLSDERSPRALQLT 69

Query: 1015 SEVIGLNPGNYTVWHFRRLVLEALNADLYEERDYVDRVAERFPKNYQIWHHRRWLAEKLG 836
              VI LNPGNYTVWHFRRLVLEALNA+LYEE DY++RVA++  KNYQIWHHRRW+AEKLG
Sbjct: 70   HLVILLNPGNYTVWHFRRLVLEALNAELYEELDYIERVAKKNTKNYQIWHHRRWVAEKLG 129

Query: 835  PKATDKELEFTKKIFTIDAKNYHTWSHRQWVLQALGGWDDELDYCQKLIEDDVFNNSAWN 656
              A  KEL+FT+KI ++DAKNYH WSHRQWVLQALGGW+DELDYC++L+E DVFNNSAWN
Sbjct: 130  TDAAAKELQFTRKILSLDAKNYHAWSHRQWVLQALGGWEDELDYCRQLLEHDVFNNSAWN 189

Query: 655  QRYFVITKSPLLGGLQAMRESEVSFAIKAILTNPQNESPWRYLRGLYKGDIEQLLSDNQV 476
            QRYF+IT+SPLLGGL+A+RESE+ F ++AIL NP+NESPWRYLRGLY+GD +  ++D QV
Sbjct: 190  QRYFIITRSPLLGGLKAVRESEMKFTVEAILANPENESPWRYLRGLYQGDTQSWINDPQV 249

Query: 475  PEVCLQVLKSGRNXXXXXXXXXXXXXFGFQPSDEFKRIVEGLTNSESSSSDANLATSVCN 296
              VCL+VL +  N              GFQ + E +  V+ L  S     + +LA +VC+
Sbjct: 250  SSVCLKVLSAKTNHIFALSMLLDLLCHGFQANQEIRDSVDALRTSNCDPPEPDLAKAVCS 309

Query: 295  ILETVDPLRANYWAWRRSTLP 233
            +LE VDP+RANYW WR+S LP
Sbjct: 310  LLEHVDPMRANYWIWRKSKLP 330


>ref|NP_001063659.1| Os09g0514400 [Oryza sativa Japonica Group]
            gi|50725355|dbj|BAD34427.1| putative protein
            farnesyltransferase/geranylgeranyltransferase type I
            alpha subunit [Oryza sativa Japonica Group]
            gi|113631892|dbj|BAF25573.1| Os09g0514400 [Oryza sativa
            Japonica Group] gi|125564361|gb|EAZ09741.1| hypothetical
            protein OsI_32029 [Oryza sativa Indica Group]
            gi|215686338|dbj|BAG87599.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215704338|dbj|BAG93772.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215737591|dbj|BAG96721.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222641912|gb|EEE70044.1|
            hypothetical protein OsJ_29998 [Oryza sativa Japonica
            Group]
          Length = 339

 Score =  443 bits (1140), Expect = e-122
 Identities = 209/325 (64%), Positives = 253/325 (77%), Gaps = 3/325 (0%)
 Frame = -1

Query: 1195 EECLPLSQRPEWADVRPVPQDDGPNPVVPIHYRENFREAMDYFRAVYLADERSLRSLNLT 1016
            +E LP S+RPE ADV PV QDDGP+PVV I YR+ FRE MDYFRA+Y A ERS+R+L+LT
Sbjct: 13   DEWLPPSRRPELADVVPVTQDDGPHPVVAIAYRDEFREVMDYFRALYFAGERSVRALHLT 72

Query: 1015 SEVIGLNPGNYTVWHFRRLVLEALNADLYEERDYVDRVAERFPKNYQIWHHRRWLAEKLG 836
            +EVI LNPGNYTVWHFRRLVLEAL+ADL EE D+VDR+AE  PKNYQIWHH+RWLAEKLG
Sbjct: 73   AEVIDLNPGNYTVWHFRRLVLEALDADLREEMDFVDRIAECNPKNYQIWHHKRWLAEKLG 132

Query: 835  PKATDKELEFTKKIFTIDAKNYHTWSHRQWVLQALGGWDDELDYCQKLIEDDVFNNSAWN 656
            P   +KE EFT+KI ++DAKNYH WSHRQWVLQALGGW+ EL YC +L+E+DVFNNSAWN
Sbjct: 133  PDIANKEHEFTRKILSMDAKNYHAWSHRQWVLQALGGWETELQYCNQLLEEDVFNNSAWN 192

Query: 655  QRYFVITKSPLLGGLQAMRESEVSFAIKAILTNPQNESPWRYLRGLYKGDIEQLLSDNQV 476
            QRY VIT SPLLGGL AMR+SEV + + AIL NPQNESPWRYL+GLYKG+   L++D ++
Sbjct: 193  QRYLVITSSPLLGGLAAMRDSEVDYTVGAILANPQNESPWRYLKGLYKGENNLLMADERI 252

Query: 475  PEVCLQVLKSGRNXXXXXXXXXXXXXFGFQPSDEFKRIVEGLTNSESSSS---DANLATS 305
             +VCL+VLK                  G QPSDE K  +E + NS+  +    DA+LAT+
Sbjct: 253  SDVCLKVLKHDSTCVFALSLLLDLLQIGLQPSDELKGTIEAIKNSDPEADEAVDADLATA 312

Query: 304  VCNILETVDPLRANYWAWRRSTLPS 230
            +C+IL+  DPLR NYW+W R+T+ S
Sbjct: 313  ICSILQRCDPLRINYWSWYRTTISS 337


>ref|XP_004167540.1| PREDICTED: protein farnesyltransferase/geranylgeranyltransferase
            type-1 subunit alpha-like [Cucumis sativus]
          Length = 325

 Score =  429 bits (1102), Expect = e-117
 Identities = 195/321 (60%), Positives = 248/321 (77%)
 Frame = -1

Query: 1195 EECLPLSQRPEWADVRPVPQDDGPNPVVPIHYRENFREAMDYFRAVYLADERSLRSLNLT 1016
            ++ LP+S+R EW DV P+PQDDGPNP+V I Y+E+F E M YFRAVY ADERS RSL+LT
Sbjct: 4    DDTLPISERREWCDVTPLPQDDGPNPIVAIAYKEDFSELMGYFRAVYRADERSPRSLHLT 63

Query: 1015 SEVIGLNPGNYTVWHFRRLVLEALNADLYEERDYVDRVAERFPKNYQIWHHRRWLAEKLG 836
            +E I +NPGNYTVWHFRRL+LEALN DL++E +++D +AE   KNYQIWHHRRW+A+KLG
Sbjct: 64   AEAIAMNPGNYTVWHFRRLILEALNVDLHDELNFLDNIAESNTKNYQIWHHRRWVAQKLG 123

Query: 835  PKATDKELEFTKKIFTIDAKNYHTWSHRQWVLQALGGWDDELDYCQKLIEDDVFNNSAWN 656
              A +KELEFT+KI ++D+KNYH WSHRQWVLQALGGW+DELDYC +L+++DVFNNSAWN
Sbjct: 124  TDAANKELEFTRKIISLDSKNYHAWSHRQWVLQALGGWEDELDYCHELLKEDVFNNSAWN 183

Query: 655  QRYFVITKSPLLGGLQAMRESEVSFAIKAILTNPQNESPWRYLRGLYKGDIEQLLSDNQV 476
            QRYFVIT+SPLLGGL++MRESEV++ ++AIL +P+NES WRYLRGLY GD +  +   QV
Sbjct: 184  QRYFVITRSPLLGGLKSMRESEVNYTVEAILAHPENESSWRYLRGLYAGDTQSWIIAPQV 243

Query: 475  PEVCLQVLKSGRNXXXXXXXXXXXXXFGFQPSDEFKRIVEGLTNSESSSSDANLATSVCN 296
              VCL+VL S  N              GF  +  F+  V+ L   + + +D+NLA + C 
Sbjct: 244  SSVCLKVLGSRINFVFALSTLLDLLSHGFPSTQAFRDAVDALRVPDDNQTDSNLAKTACL 303

Query: 295  ILETVDPLRANYWAWRRSTLP 233
            ILE VDP+R NYW W++S LP
Sbjct: 304  ILERVDPIRVNYWLWQKSKLP 324


>ref|XP_002310440.1| predicted protein [Populus trichocarpa] gi|222853343|gb|EEE90890.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  427 bits (1098), Expect = e-117
 Identities = 199/324 (61%), Positives = 243/324 (75%)
 Frame = -1

Query: 1195 EECLPLSQRPEWADVRPVPQDDGPNPVVPIHYRENFREAMDYFRAVYLADERSLRSLNLT 1016
            E  L LSQ PEWADV P+PQDDGPNPVVPI Y+ +F E M YFRAVY A+E S R+L LT
Sbjct: 5    EHKLRLSQDPEWADVTPIPQDDGPNPVVPIDYKPDFIETMGYFRAVYKANEFSPRALQLT 64

Query: 1015 SEVIGLNPGNYTVWHFRRLVLEALNADLYEERDYVDRVAERFPKNYQIWHHRRWLAEKLG 836
             + I LNPGNYTVWHFRRL+L+AL  DL EE +++  ++E  PKNYQIWHHRRW+AEKLG
Sbjct: 65   HQAILLNPGNYTVWHFRRLILDALGIDLNEELNFMSGISESNPKNYQIWHHRRWIAEKLG 124

Query: 835  PKATDKELEFTKKIFTIDAKNYHTWSHRQWVLQALGGWDDELDYCQKLIEDDVFNNSAWN 656
              A  KELEFT+++ ++DAKNYH WSHRQWVLQALGGW++ELDYC +L+E DVFNNSAWN
Sbjct: 125  TDAASKELEFTRRMLSLDAKNYHAWSHRQWVLQALGGWENELDYCHQLLEKDVFNNSAWN 184

Query: 655  QRYFVITKSPLLGGLQAMRESEVSFAIKAILTNPQNESPWRYLRGLYKGDIEQLLSDNQV 476
            QRYFV+T+SP LGGL+A RESEV + I+ IL NP NESPWRYLRGLYK D +  +SD QV
Sbjct: 185  QRYFVVTRSPFLGGLEATRESEVKYTIETILGNPGNESPWRYLRGLYKNDPKSWISDPQV 244

Query: 475  PEVCLQVLKSGRNXXXXXXXXXXXXXFGFQPSDEFKRIVEGLTNSESSSSDANLATSVCN 296
              VCL+VL +  N              GFQ + EF+  V+ L  S S  +D+++A ++C+
Sbjct: 245  SSVCLKVLSAEANHVFALSTLLDLLSHGFQANQEFRDAVDSLRPSNSDPADSDIAKTICS 304

Query: 295  ILETVDPLRANYWAWRRSTLPSMV 224
            IL  VDP+R NYW WR+S LPS V
Sbjct: 305  ILRHVDPMRVNYWTWRKSKLPSSV 328


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