BLASTX nr result

ID: Dioscorea21_contig00018083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00018083
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGE10622.1| 4-coumarate CoA ligase, partial [Lonicera macrant...    86   2e-15
gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica]              86   4e-15
ref|XP_003602078.1| 4-coumarate-coa ligase [Medicago truncatula]...    82   3e-14
ref|XP_003602077.1| 4-coumarate-coa ligase [Medicago truncatula]...    82   3e-14
gb|ADN33954.1| 4-coumarate-CoA ligase [Cucumis melo subsp. melo]       79   4e-13

>gb|AGE10622.1| 4-coumarate CoA ligase, partial [Lonicera macranthoides]
          Length = 162

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 44/72 (61%), Positives = 56/72 (77%)
 Frame = +3

Query: 3   LHSHLGISKGHVAFILSPSCLEIPILYLSLLSLDAIITPANPAATLSELSRLIDLVDPTH 182
           L S LG+SKG VAFILSP+ L+IP+LY SLLSL  II+P+NP++T SE+SR I L  P  
Sbjct: 82  LQSRLGLSKGDVAFILSPNSLQIPLLYFSLLSLGVIISPSNPSSTESEISRQIKLSKPVI 141

Query: 183 FFATSSSSSKLP 218
            FATS++S K+P
Sbjct: 142 AFATSATSHKIP 153


>gb|AGE10595.1| 4-coumarate CoA ligase [Lonicera japonica]
          Length = 540

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 44/72 (61%), Positives = 56/72 (77%)
 Frame = +3

Query: 3   LHSHLGISKGHVAFILSPSCLEIPILYLSLLSLDAIITPANPAATLSELSRLIDLVDPTH 182
           L SHLG+SKG VAFILS + L+IP+LY SLLSL  II+P+NP++T SE+SR I L  P  
Sbjct: 79  LQSHLGLSKGDVAFILSLNSLQIPLLYFSLLSLGVIISPSNPSSTESEISRQIKLSKPVI 138

Query: 183 FFATSSSSSKLP 218
            FATS++S K+P
Sbjct: 139 AFATSATSHKIP 150


>ref|XP_003602078.1| 4-coumarate-coa ligase [Medicago truncatula]
           gi|355491126|gb|AES72329.1| 4-coumarate-coa ligase
           [Medicago truncatula]
          Length = 560

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/72 (54%), Positives = 53/72 (73%)
 Frame = +3

Query: 3   LHSHLGISKGHVAFILSPSCLEIPILYLSLLSLDAIITPANPAATLSELSRLIDLVDPTH 182
           L SH  +SKGHVA IL PS + +P+LY SLLSL   I PANP ++ SELS L+ L++P  
Sbjct: 94  LQSHTTLSKGHVALILIPSSIHVPVLYFSLLSLGVTIAPANPLSSPSELSHLVHLINPVI 153

Query: 183 FFATSSSSSKLP 218
            F+TSS+++K+P
Sbjct: 154 AFSTSSTATKIP 165


>ref|XP_003602077.1| 4-coumarate-coa ligase [Medicago truncatula]
           gi|355491125|gb|AES72328.1| 4-coumarate-coa ligase
           [Medicago truncatula]
          Length = 562

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/72 (54%), Positives = 53/72 (73%)
 Frame = +3

Query: 3   LHSHLGISKGHVAFILSPSCLEIPILYLSLLSLDAIITPANPAATLSELSRLIDLVDPTH 182
           L SH  +SKGHVA IL PS + +P+LY SLLSL   I PANP ++ SELS L+ L++P  
Sbjct: 93  LQSHTTLSKGHVALILIPSSIHVPVLYFSLLSLGVTIAPANPLSSPSELSHLVHLINPVI 152

Query: 183 FFATSSSSSKLP 218
            F+TSS+++K+P
Sbjct: 153 AFSTSSTATKIP 164


>gb|ADN33954.1| 4-coumarate-CoA ligase [Cucumis melo subsp. melo]
          Length = 1055

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/72 (52%), Positives = 53/72 (73%)
 Frame = +3

Query: 3   LHSHLGISKGHVAFILSPSCLEIPILYLSLLSLDAIITPANPAATLSELSRLIDLVDPTH 182
           L S   +  GHVAFIL+P+ L+IP+LY +LLSL  +++PANP +++SE+S  I L  P  
Sbjct: 577 LKSLTSLCNGHVAFILAPTSLQIPVLYFALLSLGVVLSPANPTSSVSEISHQIQLSKPVI 636

Query: 183 FFATSSSSSKLP 218
            FATSS++SKLP
Sbjct: 637 AFATSSTASKLP 648



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/65 (50%), Positives = 48/65 (73%)
 Frame = +3

Query: 24  SKGHVAFILSPSCLEIPILYLSLLSLDAIITPANPAATLSELSRLIDLVDPTHFFATSSS 203
           S G VAFILSP+ L+IP+LY +LLSL  +++PANP ++ SE++  + L  P   FA SS+
Sbjct: 89  SNGQVAFILSPTSLQIPVLYFALLSLGVVVSPANPISSESEIAHQVSLCKPVIAFAISST 148

Query: 204 SSKLP 218
           +SK+P
Sbjct: 149 ASKIP 153


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